RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 ROPN1BQ9BZX4 212 aaPredicted RBP7.32□□□□□ -1.24
UBE4B-204ENST00000462658 POLR1EQ9GZS1 481 aaKnown RBP7.32□□□□□ -1.24
UBE4B-204ENST00000462658 S1PR5Q9H228 398 aa7.32□□□□□ -1.24
UBE4B-204ENST00000462658 ROPN1Q9HAT0 212 aaPredicted RBP7.32□□□□□ -1.24
UBE4B-204ENST00000462658 MED4Q9NPJ6 270 aa7.32□□□□□ -1.24
UBE4B-204ENST00000462658 CASS4Q9NQ75 786 aa7.32□□□□□ -1.24
UBE4B-204ENST00000462658 DUS2Q9NX74 493 aaKnown RBP7.32□□□□□ -1.24
UBE4B-204ENST00000462658 BFARQ9NZS9 450 aa7.32□□□□□ -1.24
UBE4B-204ENST00000462658 CDH22Q9UJ99 828 aa7.32□□□□□ -1.24
UBE4B-204ENST00000462658 ING1Q9UK53 422 aaPredicted RBP7.32□□□□□ -1.24
UBE4B-204ENST00000462658 CDH7Q9ULB5 785 aa7.32□□□□□ -1.24
UBE4B-204ENST00000462658 CLEC4EQ9ULY5 219 aa7.32□□□□□ -1.24
UBE4B-204ENST00000462658 MAD1L1Q9Y6D9 718 aa7.32□□□□□ -1.24
UBE4B-204ENST00000462658 WNT6Q9Y6F9 365 aa7.32□□□□□ -1.24
UBE4B-204ENST00000462658 NOTCH4Q99466 2003 aa7.32□□□□□ -1.24
UBE4B-204ENST00000462658 DOCK4Q8N1I0 1966 aa7.31□□□□□ -1.24
UBE4B-204ENST00000462658 DENND4CQ5VZ89 1909 aa7.31□□□□□ -1.24
UBE4B-204ENST00000462658 BDP1A6H8Y1 2624 aa7.31□□□□□ -1.24
UBE4B-204ENST00000462658 HEPACAM2A8MVW5 462 aa7.31□□□□□ -1.24
UBE4B-204ENST00000462658 GOLGA8KD6RF30 607 aa7.31□□□□□ -1.24
UBE4B-204ENST00000462658 E7ENX8 843 aa7.31□□□□□ -1.24
UBE4B-204ENST00000462658 H3BQF6 201 aa7.31□□□□□ -1.24
UBE4B-204ENST00000462658 PMPCBO75439 489 aa7.31□□□□□ -1.24
UBE4B-204ENST00000462658 SPAG6O75602 509 aa7.31□□□□□ -1.24
UBE4B-204ENST00000462658 CD160O95971 181 aa7.31□□□□□ -1.24
UBE4B-204ENST00000462658 AGTP01019 485 aa7.31□□□□□ -1.24
UBE4B-204ENST00000462658 MMP2P08253 660 aa7.31□□□□□ -1.24
UBE4B-204ENST00000462658 GSTA2P09210 222 aa7.31□□□□□ -1.24
UBE4B-204ENST00000462658 MYZAPP0CAP1 466 aa7.31□□□□□ -1.24
UBE4B-204ENST00000462658 SSTR1P30872 391 aa7.31□□□□□ -1.24
UBE4B-204ENST00000462658 CD70P32970 193 aa7.31□□□□□ -1.24
UBE4B-204ENST00000462658 ADRA1AP35348 466 aa7.31□□□□□ -1.24
UBE4B-204ENST00000462658 CD86P42081 329 aa7.31□□□□□ -1.24
UBE4B-204ENST00000462658 PLK1P53350 603 aa7.31□□□□□ -1.24
UBE4B-204ENST00000462658 ARF5P84085 180 aa7.31□□□□□ -1.24
UBE4B-204ENST00000462658 TAP2Q03519 686 aa7.31□□□□□ -1.24
UBE4B-204ENST00000462658 CDH17Q12864 832 aa7.31□□□□□ -1.24
UBE4B-204ENST00000462658 KRT71Q3SY84 523 aa7.31□□□□□ -1.24
UBE4B-204ENST00000462658 INO80DQ53TQ3 878 aaPredicted RBP7.31□□□□□ -1.24
UBE4B-204ENST00000462658 RETSATQ6NUM9 610 aa7.31□□□□□ -1.24
UBE4B-204ENST00000462658 CASC4Q6P4E1 433 aa7.31□□□□□ -1.24
UBE4B-204ENST00000462658 KDELC1Q6UW63 502 aa7.31□□□□□ -1.24
UBE4B-204ENST00000462658 LINGO4Q6UY18 593 aa7.31□□□□□ -1.24
UBE4B-204ENST00000462658 MICALCLQ6ZW33 695 aa7.31□□□□□ -1.24
UBE4B-204ENST00000462658 KDELC2Q7Z4H8 507 aa7.31□□□□□ -1.24
UBE4B-204ENST00000462658 CROCCP2Q86T23 111 aa7.31□□□□□ -1.24
UBE4B-204ENST00000462658 ZNF557Q8N988 423 aaPredicted RBP7.31□□□□□ -1.24
UBE4B-204ENST00000462658 IPMKQ8NFU5 416 aa7.31□□□□□ -1.24
UBE4B-204ENST00000462658 ARRDC2Q8TBH0 407 aa7.31□□□□□ -1.24
UBE4B-204ENST00000462658 BPIFB1Q8TDL5 484 aa7.31□□□□□ -1.24
UBE4B-204ENST00000462658 OSCP1Q8WVF1 389 aa7.31□□□□□ -1.24
UBE4B-204ENST00000462658 RSPRY1Q96DX4 576 aa7.31□□□□□ -1.24
UBE4B-204ENST00000462658 CFAP36Q96G28 342 aa7.31□□□□□ -1.24
UBE4B-204ENST00000462658 DOCK6Q96HP0 2047 aa7.31□□□□□ -1.24
UBE4B-204ENST00000462658 LMLNQ96KR4 655 aa7.31□□□□□ -1.24
UBE4B-204ENST00000462658 RIPOR3Q96MK2 946 aa7.31□□□□□ -1.24
UBE4B-204ENST00000462658 PSKH2Q96QS6 385 aa7.31□□□□□ -1.24
UBE4B-204ENST00000462658 SEMA3CQ99985 751 aa7.31□□□□□ -1.24
UBE4B-204ENST00000462658 APOL2Q9BQE5 337 aa7.31□□□□□ -1.24
UBE4B-204ENST00000462658 MGME1Q9BQP7 344 aa7.31□□□□□ -1.24
UBE4B-204ENST00000462658 HEPHQ9BQS7 1158 aa7.31□□□□□ -1.24
UBE4B-204ENST00000462658 FICDQ9BVA6 458 aa7.31□□□□□ -1.24
UBE4B-204ENST00000462658 FSD1LQ9BXM9 530 aa7.31□□□□□ -1.24
UBE4B-204ENST00000462658 SLC2A11Q9BYW1 496 aa7.31□□□□□ -1.24
UBE4B-204ENST00000462658 CENPHQ9H3R5 247 aa7.31□□□□□ -1.24
UBE4B-204ENST00000462658 TRPV4Q9HBA0 871 aa7.31□□□□□ -1.24
UBE4B-204ENST00000462658 TMBIM4Q9HC24 238 aa7.31□□□□□ -1.24
UBE4B-204ENST00000462658 VPS45Q9NRW7 570 aa7.31□□□□□ -1.24
UBE4B-204ENST00000462658 ABCB8Q9NUT2 735 aa7.31□□□□□ -1.24
UBE4B-204ENST00000462658 TBCCD1Q9NVR7 557 aa7.31□□□□□ -1.24
UBE4B-204ENST00000462658 BCCIPQ9P287 314 aaKnown RBP eCLIP7.31□□□□□ -1.24
UBE4B-204ENST00000462658 VPS51Q9UID3 782 aa7.31□□□□□ -1.24
UBE4B-204ENST00000462658 NYNRINQ9P2P1 1898 aaKnown RBP7.3□□□□□ -1.24
UBE4B-204ENST00000462658 A0A087WWL8 130 aa7.3□□□□□ -1.24
UBE4B-204ENST00000462658 EXOC1LA0A1B0GW35 172 aa7.3□□□□□ -1.24
UBE4B-204ENST00000462658 MAGEB16A2A368 324 aa7.3□□□□□ -1.24
UBE4B-204ENST00000462658 SMIM23A6NLE4 172 aa7.3□□□□□ -1.24
UBE4B-204ENST00000462658 ISM1B1AKI9 464 aa7.3□□□□□ -1.24
UBE4B-204ENST00000462658 MYO1CO00159 1063 aa7.3□□□□□ -1.24
UBE4B-204ENST00000462658 RASGRF2O14827 1237 aa7.3□□□□□ -1.24
UBE4B-204ENST00000462658 TCEA3O75764 348 aa7.3□□□□□ -1.24
UBE4B-204ENST00000462658 TMCC1O94876 653 aa7.3□□□□□ -1.24
UBE4B-204ENST00000462658 IVLP07476 585 aa7.3□□□□□ -1.24
UBE4B-204ENST00000462658 SERPINF2P08697 491 aa7.3□□□□□ -1.24
UBE4B-204ENST00000462658 TPH1P17752 444 aa7.3□□□□□ -1.24
UBE4B-204ENST00000462658 PGAM1P18669 254 aa7.3□□□□□ -1.24
UBE4B-204ENST00000462658 KRT4P19013 534 aa7.3□□□□□ -1.24
UBE4B-204ENST00000462658 OAS2P29728 719 aaKnown RBP7.3□□□□□ -1.24
UBE4B-204ENST00000462658 HLA-FP30511 346 aa7.3□□□□□ -1.24
UBE4B-204ENST00000462658 MTHFRP42898 656 aa7.3□□□□□ -1.24
UBE4B-204ENST00000462658 GEMIN4P57678 1058 aaKnown RBP7.3□□□□□ -1.24
UBE4B-204ENST00000462658 RHOAP61586 193 aa7.3□□□□□ -1.24
UBE4B-204ENST00000462658 CRADDP78560 199 aa7.3□□□□□ -1.24
UBE4B-204ENST00000462658 TFF2Q03403 129 aa7.3□□□□□ -1.24
UBE4B-204ENST00000462658 SLC20A2Q08357 652 aa7.3□□□□□ -1.24
UBE4B-204ENST00000462658 NSUN2Q08J23 767 aaKnown RBP eCLIP7.3□□□□□ -1.24
UBE4B-204ENST00000462658 HLXQ14774 488 aaPredicted RBP7.3□□□□□ -1.24
UBE4B-204ENST00000462658 LONRF1Q17RB8 773 aa7.3□□□□□ -1.24
UBE4B-204ENST00000462658 CERCAMQ5T4B2 595 aa7.3□□□□□ -1.24
UBE4B-204ENST00000462658 ABHD17BQ5VST6 288 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms