RNA–Protein interactions for RNA: ENST00000462289.1

VPS36-202, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-202ENST00000462289 ANKRD20A4Q4UJ75 823 aa5.63□□□□□ -1.51
VPS36-202ENST00000462289 GLE1Q53GS7 698 aaKnown RBP5.63□□□□□ -1.51
VPS36-202ENST00000462289 PRAMEF14Q5SWL7 426 aa5.63□□□□□ -1.51
VPS36-202ENST00000462289 FNBP1LQ5T0N5 605 aa5.63□□□□□ -1.51
VPS36-202ENST00000462289 CHCHD2P9Q5T1J5 151 aaPredicted RBP5.63□□□□□ -1.51
VPS36-202ENST00000462289 METRNLQ641Q3 311 aa5.63□□□□□ -1.51
VPS36-202ENST00000462289 AFTPHQ6ULP2 937 aa5.63□□□□□ -1.51
VPS36-202ENST00000462289 ENPP7Q6UWV6 458 aa5.63□□□□□ -1.51
VPS36-202ENST00000462289 FAM151BQ6UXP7 276 aa5.63□□□□□ -1.51
VPS36-202ENST00000462289 CERS6Q6ZMG9 384 aa5.63□□□□□ -1.51
VPS36-202ENST00000462289 MICALCLQ6ZW33 695 aa5.63□□□□□ -1.51
VPS36-202ENST00000462289 GSTA5Q7RTV2 222 aa5.63□□□□□ -1.51
VPS36-202ENST00000462289 MAATS1Q7Z4T9 603 aa5.63□□□□□ -1.51
VPS36-202ENST00000462289 TRIM74Q86UV6 250 aa5.63□□□□□ -1.51
VPS36-202ENST00000462289 LMNTD2Q8IXW0 634 aa5.63□□□□□ -1.51
VPS36-202ENST00000462289 SLC35F3Q8IY50 421 aa5.63□□□□□ -1.51
VPS36-202ENST00000462289 NAGSQ8N159 534 aa5.63□□□□□ -1.51
VPS36-202ENST00000462289 SFRP1Q8N474 314 aa5.63□□□□□ -1.51
VPS36-202ENST00000462289 RASGEF1AQ8N9B8 481 aa5.63□□□□□ -1.51
VPS36-202ENST00000462289 EIF1ADQ8N9N8 165 aaKnown RBP5.63□□□□□ -1.51
VPS36-202ENST00000462289 NOA1Q8NC60 698 aaKnown RBP5.63□□□□□ -1.51
VPS36-202ENST00000462289 CCL4L1Q8NHW4 92 aa5.63□□□□□ -1.51
VPS36-202ENST00000462289 KIF18AQ8NI77 898 aa5.63□□□□□ -1.51
VPS36-202ENST00000462289 ADAMTS14Q8WXS8 1223 aa5.63□□□□□ -1.51
VPS36-202ENST00000462289 TSACCQ96A04 125 aaPredicted RBP5.63□□□□□ -1.51
VPS36-202ENST00000462289 ULK4Q96C45 1275 aa5.63□□□□□ -1.51
VPS36-202ENST00000462289 MFSD3Q96ES6 412 aa5.63□□□□□ -1.51
VPS36-202ENST00000462289 SNF8Q96H20 258 aa5.63□□□□□ -1.51
VPS36-202ENST00000462289 BIRC8Q96P09 236 aa5.63□□□□□ -1.51
VPS36-202ENST00000462289 OR2M4Q96R27 311 aa5.63□□□□□ -1.51
VPS36-202ENST00000462289 KRT12Q99456 494 aa5.63□□□□□ -1.51
VPS36-202ENST00000462289 CDC6Q99741 560 aa5.63□□□□□ -1.51
VPS36-202ENST00000462289 EBNA1BP2Q99848 306 aaKnown RBP5.63□□□□□ -1.51
VPS36-202ENST00000462289 TRIM51Q9BSJ1 452 aa5.63□□□□□ -1.51
VPS36-202ENST00000462289 SPATA16Q9BXB7 569 aa5.63□□□□□ -1.51
VPS36-202ENST00000462289 P2RY12Q9H244 342 aa5.63□□□□□ -1.51
VPS36-202ENST00000462289 SUDS3Q9H7L9 328 aaPredicted RBP5.63□□□□□ -1.51
VPS36-202ENST00000462289 UCK1Q9HA47 277 aa5.63□□□□□ -1.51
VPS36-202ENST00000462289 UGT1A7Q9HAW7 530 aa5.63□□□□□ -1.51
VPS36-202ENST00000462289 UGT1A10Q9HAW8 530 aa5.63□□□□□ -1.51
VPS36-202ENST00000462289 UGT1A8Q9HAW9 530 aa5.63□□□□□ -1.51
VPS36-202ENST00000462289 BPIFA1Q9NP55 256 aa5.63□□□□□ -1.51
VPS36-202ENST00000462289 MRPL40Q9NQ50 206 aaKnown RBP5.63□□□□□ -1.51
VPS36-202ENST00000462289 PIH1D1Q9NWS0 290 aaKnown RBP5.63□□□□□ -1.51
VPS36-202ENST00000462289 DNAJC28Q9NX36 388 aa5.63□□□□□ -1.51
VPS36-202ENST00000462289 SYBUQ9NX95 663 aa5.63□□□□□ -1.51
VPS36-202ENST00000462289 MOCS1Q9NZB8 636 aa5.63□□□□□ -1.51
VPS36-202ENST00000462289 NCKIPSDQ9NZQ3 722 aa5.63□□□□□ -1.51
VPS36-202ENST00000462289 SLC23A2Q9UGH3 650 aa5.63□□□□□ -1.51
VPS36-202ENST00000462289 CNOT11Q9UKZ1 510 aaKnown RBP5.63□□□□□ -1.51
VPS36-202ENST00000462289 CDYLQ9Y232 598 aa5.63□□□□□ -1.51
VPS36-202ENST00000462289 FAM169AQ9Y6X4 670 aa5.63□□□□□ -1.51
VPS36-202ENST00000462289 PMF1-BGLAPU3KQ54 211 aa5.63□□□□□ -1.51
VPS36-202ENST00000462289 FER1L5A0AVI2 2057 aa5.62□□□□□ -1.51
VPS36-202ENST00000462289 SPTBP11277 2137 aa5.62□□□□□ -1.51
VPS36-202ENST00000462289 PKD1L2Q7Z442 2459 aa5.62□□□□□ -1.51
VPS36-202ENST00000462289 E7EVH7 732 aa5.62□□□□□ -1.51
VPS36-202ENST00000462289 CCL22O00626 93 aa5.62□□□□□ -1.51
VPS36-202ENST00000462289 NTN3O00634 580 aaPredicted RBP5.62□□□□□ -1.51
VPS36-202ENST00000462289 KMOO15229 486 aa5.62□□□□□ -1.51
VPS36-202ENST00000462289 INPP4BO15327 924 aa5.62□□□□□ -1.51
VPS36-202ENST00000462289 GRID2O43424 1007 aa5.62□□□□□ -1.51
VPS36-202ENST00000462289 NUDT21O43809 227 aaKnown RBP5.62□□□□□ -1.51
VPS36-202ENST00000462289 GPC4O75487 556 aa5.62□□□□□ -1.51
VPS36-202ENST00000462289 AP2A2O94973 939 aa5.62□□□□□ -1.51
VPS36-202ENST00000462289 TTC4O95801 387 aa5.62□□□□□ -1.51
VPS36-202ENST00000462289 EML2O95834 649 aa5.62□□□□□ -1.51
VPS36-202ENST00000462289 GOT2P00505 430 aaKnown RBP5.62□□□□□ -1.51
VPS36-202ENST00000462289 TNFP01375 233 aa5.62□□□□□ -1.51
VPS36-202ENST00000462289 CAPNS1P04632 268 aa5.62□□□□□ -1.51
VPS36-202ENST00000462289 ADRB1P08588 477 aa5.62□□□□□ -1.51
VPS36-202ENST00000462289 ZNF7P17097 686 aaPredicted RBP5.62□□□□□ -1.51
VPS36-202ENST00000462289 CKMT2P17540 419 aa5.62□□□□□ -1.51
VPS36-202ENST00000462289 ITGALP20701 1170 aa5.62□□□□□ -1.51
VPS36-202ENST00000462289 VAMP1P23763 118 aa5.62□□□□□ -1.51
VPS36-202ENST00000462289 MGAT1P26572 445 aa5.62□□□□□ -1.51
VPS36-202ENST00000462289 PMLP29590 882 aa5.62□□□□□ -1.51
VPS36-202ENST00000462289 MC4RP32245 332 aa5.62□□□□□ -1.51
VPS36-202ENST00000462289 MC3RP41968 323 aa5.62□□□□□ -1.51
VPS36-202ENST00000462289 NSG1P42857 185 aa5.62□□□□□ -1.51
VPS36-202ENST00000462289 TNNT3P45378 269 aaPredicted RBP5.62□□□□□ -1.51
VPS36-202ENST00000462289 GIPRP48546 466 aa5.62□□□□□ -1.51
VPS36-202ENST00000462289 CSRP3P50461 194 aa5.62□□□□□ -1.51
VPS36-202ENST00000462289 ITGA8P53708 1063 aa5.62□□□□□ -1.51
VPS36-202ENST00000462289 UBE2IP63279 158 aaKnown RBP5.62□□□□□ -1.51
VPS36-202ENST00000462289 CRADDP78560 199 aa5.62□□□□□ -1.51
VPS36-202ENST00000462289 SARNPP82979 210 aaKnown RBP5.62□□□□□ -1.51
VPS36-202ENST00000462289 TIAL1Q01085 375 aaKnown RBP eCLIP5.62□□□□□ -1.51
VPS36-202ENST00000462289 C2orf54Q08AI8 447 aa5.62□□□□□ -1.51
VPS36-202ENST00000462289 RPA4Q13156 261 aa5.62□□□□□ -1.51
VPS36-202ENST00000462289 CRYMQ14894 314 aa5.62□□□□□ -1.51
VPS36-202ENST00000462289 PPP1R7Q15435 360 aa5.62□□□□□ -1.51
VPS36-202ENST00000462289 TRADDQ15628 312 aa5.62□□□□□ -1.51
VPS36-202ENST00000462289 SMAD1Q15797 465 aaKnown RBP5.62□□□□□ -1.51
VPS36-202ENST00000462289 CLPPQ16740 277 aaPredicted RBP5.62□□□□□ -1.51
VPS36-202ENST00000462289 INAVAQ3KP66 663 aa5.62□□□□□ -1.51
VPS36-202ENST00000462289 CCDC38Q502W7 563 aa5.62□□□□□ -1.51
VPS36-202ENST00000462289 ZNF542PQ5EBM4 170 aa5.62□□□□□ -1.51
VPS36-202ENST00000462289 LYPLAL1Q5VWZ2 237 aa5.62□□□□□ -1.51
VPS36-202ENST00000462289 IZUMO3Q5VZ72 239 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms