RNA–Protein interactions for RNA: ENST00000460558.5

ECHDC1-211, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 301 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-211ENST00000460558 PSMD6Q15008 389 aa3.94□□□□□ -1.78
ECHDC1-211ENST00000460558 PRKD1Q15139 912 aaPredicted RBP3.94□□□□□ -1.78
ECHDC1-211ENST00000460558 SNRNP35Q16560 246 aaKnown RBP3.94□□□□□ -1.78
ECHDC1-211ENST00000460558 MLANAQ16655 118 aa3.94□□□□□ -1.78
ECHDC1-211ENST00000460558 WSCD2Q2TBF2 565 aa3.94□□□□□ -1.78
ECHDC1-211ENST00000460558 ZNF805Q5CZA5 627 aa3.94□□□□□ -1.78
ECHDC1-211ENST00000460558 KHDC1LQ5JSQ8 128 aa3.94□□□□□ -1.78
ECHDC1-211ENST00000460558 AFMIDQ63HM1 303 aa3.94□□□□□ -1.78
ECHDC1-211ENST00000460558 RAP1GAP2Q684P5 730 aa3.94□□□□□ -1.78
ECHDC1-211ENST00000460558 HIST2H2BDQ6DRA6 164 aa3.94□□□□□ -1.78
ECHDC1-211ENST00000460558 BHLHB9Q6PI77 547 aa3.94□□□□□ -1.78
ECHDC1-211ENST00000460558 SLC30A9Q6PML9 568 aa3.94□□□□□ -1.78
ECHDC1-211ENST00000460558 BHLHA9Q7RTU4 235 aa3.94□□□□□ -1.78
ECHDC1-211ENST00000460558 ADGRE4PQ86SQ3 457 aa3.94□□□□□ -1.78
ECHDC1-211ENST00000460558 CIR1Q86X95 450 aaPredicted RBP3.94□□□□□ -1.78
ECHDC1-211ENST00000460558 ZNF761Q86XN6 746 aaPredicted RBP3.94□□□□□ -1.78
ECHDC1-211ENST00000460558 PDSS2Q86YH6 399 aa3.94□□□□□ -1.78
ECHDC1-211ENST00000460558 RAB43Q86YS6 212 aa3.94□□□□□ -1.78
ECHDC1-211ENST00000460558 CMTM4Q8IZR5 234 aa3.94□□□□□ -1.78
ECHDC1-211ENST00000460558 SIX6OS1Q8N1H7 587 aa3.94□□□□□ -1.78
ECHDC1-211ENST00000460558 GALNT16Q8N428 558 aa3.94□□□□□ -1.78
ECHDC1-211ENST00000460558 ANKRD42Q8N9B4 389 aa3.94□□□□□ -1.78
ECHDC1-211ENST00000460558 DNAJB14Q8TBM8 379 aa3.94□□□□□ -1.78
ECHDC1-211ENST00000460558 MR1Q95460 341 aa3.94□□□□□ -1.78
ECHDC1-211ENST00000460558 CALML4Q96GE6 196 aa3.94□□□□□ -1.78
ECHDC1-211ENST00000460558 CNDP1Q96KN2 507 aa3.94□□□□□ -1.78
ECHDC1-211ENST00000460558 FER1L6-AS2Q96M78 137 aa3.94□□□□□ -1.78
ECHDC1-211ENST00000460558 SERPINB11Q96P15 392 aa3.94□□□□□ -1.78
ECHDC1-211ENST00000460558 IP6K3Q96PC2 410 aa3.94□□□□□ -1.78
ECHDC1-211ENST00000460558 FCRL4Q96PJ5 515 aa3.94□□□□□ -1.78
ECHDC1-211ENST00000460558 GPHA2Q96T91 129 aa3.94□□□□□ -1.78
ECHDC1-211ENST00000460558 C1orf43Q9BWL3 253 aa3.94□□□□□ -1.78
ECHDC1-211ENST00000460558 STRA6Q9BX79 667 aa3.94□□□□□ -1.78
ECHDC1-211ENST00000460558 SPRTNQ9H040 489 aaPredicted RBP3.94□□□□□ -1.78
ECHDC1-211ENST00000460558 VPS11Q9H270 941 aa3.94□□□□□ -1.78
ECHDC1-211ENST00000460558 LIME1Q9H400 295 aa3.94□□□□□ -1.78
ECHDC1-211ENST00000460558 STN1Q9H668 368 aaKnown RBP3.94□□□□□ -1.78
ECHDC1-211ENST00000460558 TRNAU1APQ9NX07 287 aaKnown RBP3.94□□□□□ -1.78
ECHDC1-211ENST00000460558 MYO1AQ9UBC5 1043 aa3.94□□□□□ -1.78
ECHDC1-211ENST00000460558 LRCH1Q9Y2L9 728 aa3.94□□□□□ -1.78
ECHDC1-211ENST00000460558 CSAG2Q9Y5P2 127 aa3.94□□□□□ -1.78
ECHDC1-211ENST00000460558 SNX13Q9Y5W8 968 aa3.94□□□□□ -1.78
ECHDC1-211ENST00000460558 HS3ST4Q9Y661 456 aa3.94□□□□□ -1.78
ECHDC1-211ENST00000460558 CYP46A1Q9Y6A2 500 aa3.94□□□□□ -1.78
ECHDC1-211ENST00000460558 SLC30A1Q9Y6M5 507 aa3.94□□□□□ -1.78
ECHDC1-211ENST00000460558 MORC2Q9Y6X9 1032 aaPredicted RBP3.94□□□□□ -1.78
ECHDC1-211ENST00000460558 CPAMD8Q8IZJ3 1885 aa3.94□□□□□ -1.78
ECHDC1-211ENST00000460558 SCO2A0A1W2PP80 73 aa3.93□□□□□ -1.78
ECHDC1-211ENST00000460558 CLCA1A8K7I4 914 aa3.93□□□□□ -1.78
ECHDC1-211ENST00000460558 ETV2O00321 342 aaPredicted RBP3.93□□□□□ -1.78
ECHDC1-211ENST00000460558 MATN2O00339 956 aa3.93□□□□□ -1.78
ECHDC1-211ENST00000460558 FFAR3O14843 346 aa3.93□□□□□ -1.78
ECHDC1-211ENST00000460558 TOX3O15405 576 aaPredicted RBP3.93□□□□□ -1.78
ECHDC1-211ENST00000460558 PHF1O43189 567 aaPredicted RBP3.93□□□□□ -1.78
ECHDC1-211ENST00000460558 SNAP91O60641 907 aa3.93□□□□□ -1.78
ECHDC1-211ENST00000460558 SLC19A2O60779 497 aa3.93□□□□□ -1.78
ECHDC1-211ENST00000460558 SLC43A1O75387 559 aa3.93□□□□□ -1.78
ECHDC1-211ENST00000460558 CTDNEP1O95476 244 aa3.93□□□□□ -1.78
ECHDC1-211ENST00000460558 AHSGP02765 367 aa3.93□□□□□ -1.78
ECHDC1-211ENST00000460558 RAF1P04049 648 aa3.93□□□□□ -1.78
ECHDC1-211ENST00000460558 PCCBP05166 539 aa3.93□□□□□ -1.78
ECHDC1-211ENST00000460558 KLK3P07288 261 aaPredicted RBP3.93□□□□□ -1.78
ECHDC1-211ENST00000460558 SBK3P0C264 359 aa3.93□□□□□ -1.78
ECHDC1-211ENST00000460558 FDPSP14324 419 aaKnown RBP3.93□□□□□ -1.78
ECHDC1-211ENST00000460558 CD19P15391 556 aa3.93□□□□□ -1.78
ECHDC1-211ENST00000460558 GAP43P17677 238 aa3.93□□□□□ -1.78
ECHDC1-211ENST00000460558 AK4P27144 223 aaPredicted RBP3.93□□□□□ -1.78
ECHDC1-211ENST00000460558 CA5AP35218 305 aa3.93□□□□□ -1.78
ECHDC1-211ENST00000460558 MAPK9P45984 424 aa3.93□□□□□ -1.78
ECHDC1-211ENST00000460558 HSPA7P48741 367 aa3.93□□□□□ -1.78
ECHDC1-211ENST00000460558 GZMKP49863 264 aa3.93□□□□□ -1.78
ECHDC1-211ENST00000460558 AP3M2P53677 418 aa3.93□□□□□ -1.78
ECHDC1-211ENST00000460558 SOX8P57073 446 aa3.93□□□□□ -1.78
ECHDC1-211ENST00000460558 BPIFB4P59827 614 aa3.93□□□□□ -1.78
ECHDC1-211ENST00000460558 CYP24A1Q07973 514 aa3.93□□□□□ -1.78
ECHDC1-211ENST00000460558 DMPKQ09013 629 aa3.93□□□□□ -1.78
ECHDC1-211ENST00000460558 PMS2P11Q13670 270 aa3.93□□□□□ -1.78
ECHDC1-211ENST00000460558 SSPNQ14714 243 aa3.93□□□□□ -1.78
ECHDC1-211ENST00000460558 SYCP1Q15431 976 aa3.93□□□□□ -1.78
ECHDC1-211ENST00000460558 IL17AQ16552 155 aa3.93□□□□□ -1.78
ECHDC1-211ENST00000460558 MPEG1Q2M385 716 aa3.93□□□□□ -1.78
ECHDC1-211ENST00000460558 SGSM1Q2NKQ1 1148 aa3.93□□□□□ -1.78
ECHDC1-211ENST00000460558 DEFB113Q30KQ7 82 aa3.93□□□□□ -1.78
ECHDC1-211ENST00000460558 SHEQ5VZ18 495 aa3.93□□□□□ -1.78
ECHDC1-211ENST00000460558 ZNF324BQ6AW86 544 aaPredicted RBP3.93□□□□□ -1.78
ECHDC1-211ENST00000460558 RPUSD3Q6P087 351 aaKnown RBP3.93□□□□□ -1.78
ECHDC1-211ENST00000460558 NCCRP1Q6ZVX7 275 aaPredicted RBP3.93□□□□□ -1.78
ECHDC1-211ENST00000460558 NRROSQ86YC3 692 aa3.93□□□□□ -1.78
ECHDC1-211ENST00000460558 ZBTB2Q8N680 514 aa3.93□□□□□ -1.78
ECHDC1-211ENST00000460558 PCDH20Q8N6Y1 951 aaKnown RBP3.93□□□□□ -1.78
ECHDC1-211ENST00000460558 ENDOVQ8N8Q3 282 aaKnown RBP3.93□□□□□ -1.78
ECHDC1-211ENST00000460558 DNAAF3Q8N9W5 541 aa3.93□□□□□ -1.78
ECHDC1-211ENST00000460558 RASSF8Q8NHQ8 419 aa3.93□□□□□ -1.78
ECHDC1-211ENST00000460558 DACT3Q96B18 629 aaPredicted RBP3.93□□□□□ -1.78
ECHDC1-211ENST00000460558 SH3KBP1Q96B97 665 aa3.93□□□□□ -1.78
ECHDC1-211ENST00000460558 BTN2A3PQ96KV6 586 aa3.93□□□□□ -1.78
ECHDC1-211ENST00000460558 C9orf72Q96LT7 481 aa3.93□□□□□ -1.78
ECHDC1-211ENST00000460558 GBP5Q96PP8 586 aa3.93□□□□□ -1.78
ECHDC1-211ENST00000460558 TWNKQ96RR1 684 aa3.93□□□□□ -1.78
ECHDC1-211ENST00000460558 NDC1Q9BTX1 674 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms