RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 DPEP2Q9H4A9 486 aa8.74□□□□□ -1.01
VPS50-207ENST00000458530 ZNF395Q9H8N7 513 aaPredicted RBP8.74□□□□□ -1.01
VPS50-207ENST00000458530 KCNK13Q9HB14 408 aa8.74□□□□□ -1.01
VPS50-207ENST00000458530 SLC24A3Q9HC58 644 aa8.74□□□□□ -1.01
VPS50-207ENST00000458530 MID1IP1Q9NPA3 183 aa8.74□□□□□ -1.01
VPS50-207ENST00000458530 TCF7L2Q9NQB0 619 aa8.74□□□□□ -1.01
VPS50-207ENST00000458530 ABCF3Q9NUQ8 709 aa8.74□□□□□ -1.01
VPS50-207ENST00000458530 ARL15Q9NXU5 204 aa8.74□□□□□ -1.01
VPS50-207ENST00000458530 ATXN10Q9UBB4 475 aa8.74□□□□□ -1.01
VPS50-207ENST00000458530 OPTCQ9UBM4 332 aa8.74□□□□□ -1.01
VPS50-207ENST00000458530 SERGEFQ9UGK8 458 aa8.74□□□□□ -1.01
VPS50-207ENST00000458530 PCTPQ9UKL6 214 aa8.74□□□□□ -1.01
VPS50-207ENST00000458530 CNOT6Q9ULM6 557 aaKnown RBP8.74□□□□□ -1.01
VPS50-207ENST00000458530 CACNA1EQ15878 2313 aa8.73□□□□□ -1.01
VPS50-207ENST00000458530 SLC5A10A0PJK1 596 aa8.73□□□□□ -1.01
VPS50-207ENST00000458530 MGAT4DA6NG13 374 aa8.73□□□□□ -1.01
VPS50-207ENST00000458530 GFYI3L273 518 aa8.73□□□□□ -1.01
VPS50-207ENST00000458530 K7EPI3 171 aa8.73□□□□□ -1.01
VPS50-207ENST00000458530 K7ESM1 405 aa8.73□□□□□ -1.01
VPS50-207ENST00000458530 FPGTO14772 594 aa8.73□□□□□ -1.01
VPS50-207ENST00000458530 AZIN1O14977 448 aa8.73□□□□□ -1.01
VPS50-207ENST00000458530 CHUKO15111 745 aa8.73□□□□□ -1.01
VPS50-207ENST00000458530 SLC22A2O15244 555 aa8.73□□□□□ -1.01
VPS50-207ENST00000458530 ST8SIA5O15466 376 aa8.73□□□□□ -1.01
VPS50-207ENST00000458530 SGTAO43765 313 aa8.73□□□□□ -1.01
VPS50-207ENST00000458530 UBOX5O94941 541 aa8.73□□□□□ -1.01
VPS50-207ENST00000458530 ESRRBO95718 433 aa8.73□□□□□ -1.01
VPS50-207ENST00000458530 ENO1P06733 434 aaKnown RBP8.73□□□□□ -1.01
VPS50-207ENST00000458530 FGF4P08620 206 aa8.73□□□□□ -1.01
VPS50-207ENST00000458530 HOXC4P09017 264 aaPredicted RBP8.73□□□□□ -1.01
VPS50-207ENST00000458530 SERPINB3P29508 390 aa8.73□□□□□ -1.01
VPS50-207ENST00000458530 AKT2P31751 481 aa8.73□□□□□ -1.01
VPS50-207ENST00000458530 TRIM23P36406 574 aa8.73□□□□□ -1.01
VPS50-207ENST00000458530 ARL1P40616 181 aaPredicted RBP8.73□□□□□ -1.01
VPS50-207ENST00000458530 KCNC1P48547 511 aa8.73□□□□□ -1.01
VPS50-207ENST00000458530 IDH3AP50213 366 aa8.73□□□□□ -1.01
VPS50-207ENST00000458530 CTSCP53634 463 aa8.73□□□□□ -1.01
VPS50-207ENST00000458530 INHBCP55103 352 aa8.73□□□□□ -1.01
VPS50-207ENST00000458530 KRT72Q14CN4 511 aa8.73□□□□□ -1.01
VPS50-207ENST00000458530 KHDC1Q4VXA5 237 aaKnown RBP8.73□□□□□ -1.01
VPS50-207ENST00000458530 EPGNQ6UW88 154 aa8.73□□□□□ -1.01
VPS50-207ENST00000458530 UNC5DQ6UXZ4 953 aa8.73□□□□□ -1.01
VPS50-207ENST00000458530 CYHR1Q6ZMK1 362 aa8.73□□□□□ -1.01
VPS50-207ENST00000458530 GPRIN3Q6ZVF9 776 aa8.73□□□□□ -1.01
VPS50-207ENST00000458530 CLNKQ7Z7G1 428 aa8.73□□□□□ -1.01
VPS50-207ENST00000458530 MTDHQ86UE4 582 aaKnown RBP8.73□□□□□ -1.01
VPS50-207ENST00000458530 AMZ2Q86W34 360 aa8.73□□□□□ -1.01
VPS50-207ENST00000458530 LSMEM2Q8N112 164 aa8.73□□□□□ -1.01
VPS50-207ENST00000458530 PGBD3Q8N328 593 aa8.73□□□□□ -1.01
VPS50-207ENST00000458530 OXR1Q8N573 874 aa8.73□□□□□ -1.01
VPS50-207ENST00000458530 TP53I13Q8NBR0 393 aaPredicted RBP8.73□□□□□ -1.01
VPS50-207ENST00000458530 FBXO15Q8NCQ5 510 aaPredicted RBP8.73□□□□□ -1.01
VPS50-207ENST00000458530 PHC3Q8NDX5 983 aa8.73□□□□□ -1.01
VPS50-207ENST00000458530 OR2L2Q8NH16 312 aa8.73□□□□□ -1.01
VPS50-207ENST00000458530 AGR3Q8TD06 166 aa8.73□□□□□ -1.01
VPS50-207ENST00000458530 HMGB4Q8WW32 186 aa8.73□□□□□ -1.01
VPS50-207ENST00000458530 ATP6V1E2Q96A05 226 aa8.73□□□□□ -1.01
VPS50-207ENST00000458530 TIMM29Q9BSF4 260 aa8.73□□□□□ -1.01
VPS50-207ENST00000458530 HGH1Q9BTY7 390 aa8.73□□□□□ -1.01
VPS50-207ENST00000458530 MYLK2Q9H1R3 596 aa8.73□□□□□ -1.01
VPS50-207ENST00000458530 CD248Q9HCU0 757 aa8.73□□□□□ -1.01
VPS50-207ENST00000458530 UTP6Q9NYH9 597 aaKnown RBP8.73□□□□□ -1.01
VPS50-207ENST00000458530 USP36Q9P275 1121 aaKnown RBP8.73□□□□□ -1.01
VPS50-207ENST00000458530 EIF2B4Q9UI10 523 aaKnown RBP8.73□□□□□ -1.01
VPS50-207ENST00000458530 ZDHHC2Q9UIJ5 367 aa8.73□□□□□ -1.01
VPS50-207ENST00000458530 PTBP2Q9UKA9 531 aaKnown RBP8.73□□□□□ -1.01
VPS50-207ENST00000458530 ZFR2Q9UPR6 939 aaKnown RBP8.73□□□□□ -1.01
VPS50-207ENST00000458530 TRAF6Q9Y4K3 522 aa8.73□□□□□ -1.01
VPS50-207ENST00000458530 FREM2Q5SZK8 3169 aa8.72□□□□□ -1.01
VPS50-207ENST00000458530 PCM1Q15154 2024 aa8.72□□□□□ -1.01
VPS50-207ENST00000458530 ZNF839A8K0R7 811 aa8.72□□□□□ -1.01
VPS50-207ENST00000458530 IFRD1O00458 451 aaPredicted RBP8.72□□□□□ -1.01
VPS50-207ENST00000458530 E2F3O00716 465 aa8.72□□□□□ -1.01
VPS50-207ENST00000458530 FCHO1O14526 889 aa8.72□□□□□ -1.01
VPS50-207ENST00000458530 AXIN1O15169 862 aa8.72□□□□□ -1.01
VPS50-207ENST00000458530 GRID2O43424 1007 aa8.72□□□□□ -1.01
VPS50-207ENST00000458530 KDM1AO60341 852 aa8.72□□□□□ -1.01
VPS50-207ENST00000458530 CCNT2O60583 730 aaKnown RBP8.72□□□□□ -1.01
VPS50-207ENST00000458530 ZNF217O75362 1048 aa8.72□□□□□ -1.01
VPS50-207ENST00000458530 PSIP1O75475 530 aaKnown RBP8.72□□□□□ -1.01
VPS50-207ENST00000458530 STK16O75716 305 aa8.72□□□□□ -1.01
VPS50-207ENST00000458530 POP7O75817 140 aaKnown RBP8.72□□□□□ -1.01
VPS50-207ENST00000458530 SIX3O95343 332 aaPredicted RBP8.72□□□□□ -1.01
VPS50-207ENST00000458530 MATN4O95460 622 aa8.72□□□□□ -1.01
VPS50-207ENST00000458530 SEMA4FO95754 770 aa8.72□□□□□ -1.01
VPS50-207ENST00000458530 GUCA1CO95843 209 aa8.72□□□□□ -1.01
VPS50-207ENST00000458530 PAK4O96013 591 aaPredicted RBP8.72□□□□□ -1.01
VPS50-207ENST00000458530 IGLV3-19P01714 112 aa8.72□□□□□ -1.01
VPS50-207ENST00000458530 UROSP10746 265 aa8.72□□□□□ -1.01
VPS50-207ENST00000458530 EPB42P16452 691 aa8.72□□□□□ -1.01
VPS50-207ENST00000458530 ZNF8P17098 575 aaPredicted RBP8.72□□□□□ -1.01
VPS50-207ENST00000458530 JUNDP17535 347 aa8.72□□□□□ -1.01
VPS50-207ENST00000458530 GABRG2P18507 467 aa8.72□□□□□ -1.01
VPS50-207ENST00000458530 CSRP1P21291 193 aaKnown RBP8.72□□□□□ -1.01
VPS50-207ENST00000458530 HNRNPA2B1P22626 353 aaKnown RBP8.72□□□□□ -1.01
VPS50-207ENST00000458530 HTR1BP28222 390 aa8.72□□□□□ -1.01
VPS50-207ENST00000458530 ADSLP30566 484 aaPredicted RBP8.72□□□□□ -1.01
VPS50-207ENST00000458530 ARRB2P32121 409 aa8.72□□□□□ -1.01
VPS50-207ENST00000458530 MPLP40238 635 aa8.72□□□□□ -1.01
VPS50-207ENST00000458530 TPMTP51580 245 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms