RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 EPN1Q9Y6I3 576 aaPredicted RBP20.77■□□□□ 0.92
CPNE1-220ENST00000458038 MROH6A6NGR9 719 aa20.76■□□□□ 0.91
CPNE1-220ENST00000458038 PTMAP06454 111 aaKnown RBP20.76■□□□□ 0.91
CPNE1-220ENST00000458038 TPH1P17752 444 aa20.76■□□□□ 0.91
CPNE1-220ENST00000458038 POU6F1Q14863 301 aa20.76■□□□□ 0.91
CPNE1-220ENST00000458038 ZIC1Q15915 447 aa20.76■□□□□ 0.91
CPNE1-220ENST00000458038 NKAIN1Q4KMZ8 207 aa20.76■□□□□ 0.91
CPNE1-220ENST00000458038 PRR30Q53SZ7 412 aaPredicted RBP20.76■□□□□ 0.91
CPNE1-220ENST00000458038 DLG3Q92796 817 aa20.76■□□□□ 0.91
CPNE1-220ENST00000458038 SNRNP40Q96DI7 357 aaKnown RBP20.76■□□□□ 0.91
CPNE1-220ENST00000458038 NDC1Q9BTX1 674 aa20.76■□□□□ 0.91
CPNE1-220ENST00000458038 SPRTNQ9H040 489 aaPredicted RBP20.76■□□□□ 0.91
CPNE1-220ENST00000458038 P4HTMQ9NXG6 502 aa20.76■□□□□ 0.91
CPNE1-220ENST00000458038 PCM1Q15154 2024 aa20.76■□□□□ 0.91
CPNE1-220ENST00000458038 DOCK10Q96BY6 2186 aa20.75■□□□□ 0.91
CPNE1-220ENST00000458038 SLC5A10A0PJK1 596 aa20.75■□□□□ 0.91
CPNE1-220ENST00000458038 WIPF3A6NGB9 483 aa20.75■□□□□ 0.91
CPNE1-220ENST00000458038 GAS8O95995 478 aa20.75■□□□□ 0.91
CPNE1-220ENST00000458038 MSNP26038 577 aaKnown RBP20.75■□□□□ 0.91
CPNE1-220ENST00000458038 MRPL49Q13405 166 aaKnown RBP20.75■□□□□ 0.91
CPNE1-220ENST00000458038 RAPSNQ13702 412 aa20.75■□□□□ 0.91
CPNE1-220ENST00000458038 SYTL3Q4VX76 610 aa20.75■□□□□ 0.91
CPNE1-220ENST00000458038 MRPL14Q6P1L8 145 aaKnown RBP20.75■□□□□ 0.91
CPNE1-220ENST00000458038 TRIM73Q86UV7 250 aa20.75■□□□□ 0.91
CPNE1-220ENST00000458038 ZADH2Q8N4Q0 377 aa20.75■□□□□ 0.91
CPNE1-220ENST00000458038 DNAJC22Q8N4W6 341 aa20.75■□□□□ 0.91
CPNE1-220ENST00000458038 FAM71DQ8N9W8 422 aa20.75■□□□□ 0.91
CPNE1-220ENST00000458038 FLVCR1-AS1Q8TAF5 88 aa20.75■□□□□ 0.91
CPNE1-220ENST00000458038 ALG3Q92685 438 aa20.75■□□□□ 0.91
CPNE1-220ENST00000458038 PANX2Q96RD6 677 aa20.75■□□□□ 0.91
CPNE1-220ENST00000458038 ATP13A2Q9NQ11 1180 aa20.75■□□□□ 0.91
CPNE1-220ENST00000458038 SPHK1Q9NYA1 384 aa20.75■□□□□ 0.91
CPNE1-220ENST00000458038 TDRKHQ9Y2W6 561 aaKnown RBP20.75■□□□□ 0.91
CPNE1-220ENST00000458038 CCDC78A2IDD5 438 aa20.74■□□□□ 0.91
CPNE1-220ENST00000458038 ERI2A8K979 691 aaKnown RBP20.74■□□□□ 0.91
CPNE1-220ENST00000458038 ISM1B1AKI9 464 aa20.74■□□□□ 0.91
CPNE1-220ENST00000458038 BHMG1C9JSJ3 638 aaPredicted RBP20.74■□□□□ 0.91
CPNE1-220ENST00000458038 CBX6O95503 412 aa20.74■□□□□ 0.91
CPNE1-220ENST00000458038 METTL18O95568 372 aa20.74■□□□□ 0.91
CPNE1-220ENST00000458038 RPN2P04844 631 aa20.74■□□□□ 0.91
CPNE1-220ENST00000458038 PRSS56P0CW18 603 aa20.74■□□□□ 0.91
CPNE1-220ENST00000458038 PIM1P11309 404 aaPredicted RBP20.74■□□□□ 0.91
CPNE1-220ENST00000458038 PPARGP37231 505 aaPredicted RBP20.74■□□□□ 0.91
CPNE1-220ENST00000458038 ARSFP54793 590 aa20.74■□□□□ 0.91
CPNE1-220ENST00000458038 CYP2A13Q16696 494 aa20.74■□□□□ 0.91
CPNE1-220ENST00000458038 DNAJC21Q5F1R6 531 aaKnown RBP20.74■□□□□ 0.91
CPNE1-220ENST00000458038 C1orf189Q5VU69 101 aa20.74■□□□□ 0.91
CPNE1-220ENST00000458038 ZNF655Q8N720 491 aaPredicted RBP20.74■□□□□ 0.91
CPNE1-220ENST00000458038 PCSK5Q92824 1860 aa20.74■□□□□ 0.91
CPNE1-220ENST00000458038 SLC22A18Q96BI1 424 aa20.74■□□□□ 0.91
CPNE1-220ENST00000458038 ILKAPQ9H0C8 392 aaPredicted RBP20.74■□□□□ 0.91
CPNE1-220ENST00000458038 ZNF552Q9H707 407 aaPredicted RBP20.74■□□□□ 0.91
CPNE1-220ENST00000458038 IRAK4Q9NWZ3 460 aa20.74■□□□□ 0.91
CPNE1-220ENST00000458038 NUP210LQ5VU65 1888 aa20.73■□□□□ 0.91
CPNE1-220ENST00000458038 RCCD1A6NED2 376 aa20.73■□□□□ 0.91
CPNE1-220ENST00000458038 AIMP2Q13155 320 aaKnown RBP20.73■□□□□ 0.91
CPNE1-220ENST00000458038 BRD3Q15059 726 aa20.73■□□□□ 0.91
CPNE1-220ENST00000458038 NR6A1Q15406 480 aa20.73■□□□□ 0.91
CPNE1-220ENST00000458038 DEFB110Q30KQ9 67 aa20.73■□□□□ 0.91
CPNE1-220ENST00000458038 MAMDC2Q7Z304 686 aaPredicted RBP20.73■□□□□ 0.91
CPNE1-220ENST00000458038 CISD2Q8N5K1 135 aaKnown RBP20.73■□□□□ 0.91
CPNE1-220ENST00000458038 UBL4BQ8N7F7 174 aa20.73■□□□□ 0.91
CPNE1-220ENST00000458038 LRRC57Q8N9N7 239 aa20.73■□□□□ 0.91
CPNE1-220ENST00000458038 COG1Q8WTW3 980 aa20.73■□□□□ 0.91
CPNE1-220ENST00000458038 FKBP10Q96AY3 582 aa20.73■□□□□ 0.91
CPNE1-220ENST00000458038 TSSK1BQ9BXA7 367 aa20.73■□□□□ 0.91
CPNE1-220ENST00000458038 ASF1BQ9NVP2 202 aa20.73■□□□□ 0.91
CPNE1-220ENST00000458038 DHCR7Q9UBM7 475 aaKnown RBP20.73■□□□□ 0.91
CPNE1-220ENST00000458038 AMFRQ9UKV5 643 aa20.73■□□□□ 0.91
CPNE1-220ENST00000458038 RIMKLBQ9ULI2 386 aa20.73■□□□□ 0.91
CPNE1-220ENST00000458038 CDYLQ9Y232 598 aa20.73■□□□□ 0.91
CPNE1-220ENST00000458038 SLC5A6Q9Y289 635 aa20.73■□□□□ 0.91
CPNE1-220ENST00000458038 PRSS21Q9Y6M0 314 aa20.73■□□□□ 0.91
CPNE1-220ENST00000458038 DUSP10Q9Y6W6 482 aa20.73■□□□□ 0.91
CPNE1-220ENST00000458038 DIDO1Q9BTC0 2240 aaKnown RBP20.73■□□□□ 0.91
CPNE1-220ENST00000458038 MIF4GDA9UHW6 222 aaKnown RBP20.72■□□□□ 0.91
CPNE1-220ENST00000458038 AGPSO00116 658 aa20.72■□□□□ 0.91
CPNE1-220ENST00000458038 HCRTR1O43613 425 aa20.72■□□□□ 0.91
CPNE1-220ENST00000458038 ALBP02768 609 aa20.72■□□□□ 0.91
CPNE1-220ENST00000458038 TPBGLP0DKB5 382 aa20.72■□□□□ 0.91
CPNE1-220ENST00000458038 FOXN2P32314 431 aa20.72■□□□□ 0.91
CPNE1-220ENST00000458038 RAB28P51157 221 aa20.72■□□□□ 0.91
CPNE1-220ENST00000458038 ELOAQ14241 798 aaKnown RBP20.72■□□□□ 0.91
CPNE1-220ENST00000458038 YOD1Q5VVQ6 348 aaPredicted RBP20.72■□□□□ 0.91
CPNE1-220ENST00000458038 HIST2H2BCQ6DN03 193 aa20.72■□□□□ 0.91
CPNE1-220ENST00000458038 AADACL2Q6P093 401 aa20.72■□□□□ 0.91
CPNE1-220ENST00000458038 C19orf60Q96EN9 201 aa20.72■□□□□ 0.91
CPNE1-220ENST00000458038 BARD1Q99728 777 aaKnown RBP20.72■□□□□ 0.91
CPNE1-220ENST00000458038 WDR54Q9H977 334 aa20.72■□□□□ 0.91
CPNE1-220ENST00000458038 INTS7Q9NVH2 962 aaKnown RBP20.72■□□□□ 0.91
CPNE1-220ENST00000458038 EURLQ9NYK6 297 aa20.72■□□□□ 0.91
CPNE1-220ENST00000458038 COPG1Q9Y678 874 aaKnown RBP20.72■□□□□ 0.91
CPNE1-220ENST00000458038 HEATR9A2RTY3 570 aa20.71■□□□□ 0.91
CPNE1-220ENST00000458038 ANKUB1A6NFN9 424 aa20.71■□□□□ 0.91
CPNE1-220ENST00000458038 ONECUT2O95948 504 aa20.71■□□□□ 0.91
CPNE1-220ENST00000458038 STIP1P31948 543 aaKnown RBP20.71■□□□□ 0.91
CPNE1-220ENST00000458038 CDH17Q12864 832 aa20.71■□□□□ 0.91
CPNE1-220ENST00000458038 Q6ZS92 163 aa20.71■□□□□ 0.91
CPNE1-220ENST00000458038 PEX26Q7Z412 305 aa20.71■□□□□ 0.91
CPNE1-220ENST00000458038 PPP1R32Q7Z5V6 425 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms