RNA–Protein interactions for RNA: ENST00000455220.6

CCDC90B-202, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-202ENST00000455220 FBXL8Q96CD0 374 aa16.13■□□□□ 0.17
CCDC90B-202ENST00000455220 CAMK1GQ96NX5 476 aa16.13■□□□□ 0.17
CCDC90B-202ENST00000455220 PKP4Q99569 1192 aa16.13■□□□□ 0.17
CCDC90B-202ENST00000455220 EP300Q09472 2414 aaPredicted RBP16.12■□□□□ 0.17
CCDC90B-202ENST00000455220 KRT87PA6NCN2 255 aa16.12■□□□□ 0.17
CCDC90B-202ENST00000455220 PABPN1LA6NDY0 278 aaKnown RBP16.12■□□□□ 0.17
CCDC90B-202ENST00000455220 SMIM24O75264 130 aa16.12■□□□□ 0.17
CCDC90B-202ENST00000455220 VIPP01282 170 aa16.12■□□□□ 0.17
CCDC90B-202ENST00000455220 BPGMP07738 259 aa16.12■□□□□ 0.17
CCDC90B-202ENST00000455220 ALPPL2P10696 532 aa16.12■□□□□ 0.17
CCDC90B-202ENST00000455220 TGM1P22735 817 aa16.12■□□□□ 0.17
CCDC90B-202ENST00000455220 HNMTP50135 292 aa16.12■□□□□ 0.17
CCDC90B-202ENST00000455220 MAZP56270 477 aaKnown RBP16.12■□□□□ 0.17
CCDC90B-202ENST00000455220 PRKG2Q13237 762 aa16.12■□□□□ 0.17
CCDC90B-202ENST00000455220 KRT33BQ14525 404 aa16.12■□□□□ 0.17
CCDC90B-202ENST00000455220 C14orf28Q4W4Y0 310 aa16.12■□□□□ 0.17
CCDC90B-202ENST00000455220 SULT1C3Q6IMI6 304 aa16.12■□□□□ 0.17
CCDC90B-202ENST00000455220 ZCCHC8Q6NZY4 707 aaKnown RBP16.12■□□□□ 0.17
CCDC90B-202ENST00000455220 DBX2Q6ZNG2 339 aa16.12■□□□□ 0.17
CCDC90B-202ENST00000455220 TRIM48Q8IWZ4 208 aa16.12■□□□□ 0.17
CCDC90B-202ENST00000455220 FBXO39Q8N4B4 442 aa16.12■□□□□ 0.17
CCDC90B-202ENST00000455220 FAM181AQ8N9Y4 354 aa16.12■□□□□ 0.17
CCDC90B-202ENST00000455220 KYQ8NBH2 561 aa16.12■□□□□ 0.17
CCDC90B-202ENST00000455220 PARD6AQ9NPB6 346 aa16.12■□□□□ 0.17
CCDC90B-202ENST00000455220 CD274Q9NZQ7 290 aa16.12■□□□□ 0.17
CCDC90B-202ENST00000455220 SPATA7Q9P0W8 599 aa16.12■□□□□ 0.17
CCDC90B-202ENST00000455220 SIRPGQ9P1W8 387 aa16.12■□□□□ 0.17
CCDC90B-202ENST00000455220 PTBP2Q9UKA9 531 aaKnown RBP16.12■□□□□ 0.17
CCDC90B-202ENST00000455220 TDRKHQ9Y2W6 561 aaKnown RBP16.12■□□□□ 0.17
CCDC90B-202ENST00000455220 NCF1BA6NI72 391 aaPredicted RBP16.11■□□□□ 0.17
CCDC90B-202ENST00000455220 NCF1CA8MVU1 366 aaPredicted RBP16.11■□□□□ 0.17
CCDC90B-202ENST00000455220 STX16-NPEPL1H3BU86 382 aa16.11■□□□□ 0.17
CCDC90B-202ENST00000455220 TRIM38O00635 465 aa16.11■□□□□ 0.17
CCDC90B-202ENST00000455220 CDX4O14627 284 aaPredicted RBP16.11■□□□□ 0.17
CCDC90B-202ENST00000455220 STX16O14662 325 aa16.11■□□□□ 0.17
CCDC90B-202ENST00000455220 BIRC5O15392 142 aa16.11■□□□□ 0.17
CCDC90B-202ENST00000455220 IPO13O94829 963 aaKnown RBP16.11■□□□□ 0.17
CCDC90B-202ENST00000455220 GUCA1CO95843 209 aa16.11■□□□□ 0.17
CCDC90B-202ENST00000455220 SLC16A8O95907 504 aa16.11■□□□□ 0.17
CCDC90B-202ENST00000455220 S100BP04271 92 aaPredicted RBP16.11■□□□□ 0.17
CCDC90B-202ENST00000455220 GFAPP14136 432 aa16.11■□□□□ 0.17
CCDC90B-202ENST00000455220 NCF1P14598 390 aaPredicted RBP16.11■□□□□ 0.17
CCDC90B-202ENST00000455220 CHN1P15882 459 aa16.11■□□□□ 0.17
CCDC90B-202ENST00000455220 IMPA1P29218 277 aa16.11■□□□□ 0.17
CCDC90B-202ENST00000455220 GGT5P36269 586 aa16.11■□□□□ 0.17
CCDC90B-202ENST00000455220 ALDH18A1P54886 795 aaKnown RBP16.11■□□□□ 0.17
CCDC90B-202ENST00000455220 HHEXQ03014 270 aa16.11■□□□□ 0.17
CCDC90B-202ENST00000455220 ARHGAP19Q14CB8 494 aa16.11■□□□□ 0.17
CCDC90B-202ENST00000455220 SETDB1Q15047 1291 aa16.11■□□□□ 0.17
CCDC90B-202ENST00000455220 ZXDCQ2QGD7 858 aaPredicted RBP16.11■□□□□ 0.17
CCDC90B-202ENST00000455220 HHATQ5VTY9 493 aa16.11■□□□□ 0.17
CCDC90B-202ENST00000455220 SLC22A9Q8IVM8 553 aa16.11■□□□□ 0.17
CCDC90B-202ENST00000455220 SLC35F3Q8IY50 421 aa16.11■□□□□ 0.17
CCDC90B-202ENST00000455220 TCAIMQ8N3R3 496 aa16.11■□□□□ 0.17
CCDC90B-202ENST00000455220 OR52E1Q8NGJ3 308 aa16.11■□□□□ 0.17
CCDC90B-202ENST00000455220 FAM76AQ8TAV0 307 aa16.11■□□□□ 0.17
CCDC90B-202ENST00000455220 MGARPQ8TDB4 240 aa16.11■□□□□ 0.17
CCDC90B-202ENST00000455220 UBTD2Q8WUN7 234 aa16.11■□□□□ 0.17
CCDC90B-202ENST00000455220 ATL1Q8WXF7 558 aa16.11■□□□□ 0.17
CCDC90B-202ENST00000455220 CCDC126Q96EE4 140 aa16.11■□□□□ 0.17
CCDC90B-202ENST00000455220 EGFL8Q99944 293 aa16.11■□□□□ 0.17
CCDC90B-202ENST00000455220 UCK1Q9HA47 277 aa16.11■□□□□ 0.17
CCDC90B-202ENST00000455220 MLXIPLQ9NP71 852 aa16.11■□□□□ 0.17
CCDC90B-202ENST00000455220 OXSMQ9NWU1 459 aa16.11■□□□□ 0.17
CCDC90B-202ENST00000455220 STOX2Q9P2F5 926 aaPredicted RBP16.11■□□□□ 0.17
CCDC90B-202ENST00000455220 TAPBPO15533 448 aa16.1■□□□□ 0.17
CCDC90B-202ENST00000455220 KDM1AO60341 852 aa16.1■□□□□ 0.17
CCDC90B-202ENST00000455220 KCNA4P22459 653 aa16.1■□□□□ 0.17
CCDC90B-202ENST00000455220 PKLRP30613 574 aa16.1■□□□□ 0.17
CCDC90B-202ENST00000455220 ALDH3A1P30838 453 aa16.1■□□□□ 0.17
CCDC90B-202ENST00000455220 HSD17B2P37059 387 aa16.1■□□□□ 0.17
CCDC90B-202ENST00000455220 RAB28P51157 221 aa16.1■□□□□ 0.17
CCDC90B-202ENST00000455220 PRKAA2P54646 552 aa16.1■□□□□ 0.17
CCDC90B-202ENST00000455220 DNAJB13P59910 316 aa16.1■□□□□ 0.17
CCDC90B-202ENST00000455220 GPR18Q14330 331 aa16.1■□□□□ 0.17
CCDC90B-202ENST00000455220 SUZ12Q15022 739 aaKnown RBP16.1■□□□□ 0.17
CCDC90B-202ENST00000455220 CYP2A13Q16696 494 aa16.1■□□□□ 0.17
CCDC90B-202ENST00000455220 PFKFB4Q16877 469 aa16.1■□□□□ 0.17
CCDC90B-202ENST00000455220 TMEM26Q6ZUK4 368 aa16.1■□□□□ 0.17
CCDC90B-202ENST00000455220 C10orf107Q8IVU9 208 aa16.1■□□□□ 0.17
CCDC90B-202ENST00000455220 PTGR2Q8N8N7 351 aaPredicted RBP16.1■□□□□ 0.17
CCDC90B-202ENST00000455220 ZNF480Q8WV37 535 aa16.1■□□□□ 0.17
CCDC90B-202ENST00000455220 TMEM79Q9BSE2 394 aa16.1■□□□□ 0.17
CCDC90B-202ENST00000455220 MECRQ9BV79 373 aa16.1■□□□□ 0.17
CCDC90B-202ENST00000455220 EDEM2Q9BV94 578 aa16.1■□□□□ 0.17
CCDC90B-202ENST00000455220 RAB11FIP5Q9BXF6 653 aa16.1■□□□□ 0.17
CCDC90B-202ENST00000455220 STN1Q9H668 368 aaKnown RBP16.1■□□□□ 0.17
CCDC90B-202ENST00000455220 NCKIPSDQ9NZQ3 722 aa16.1■□□□□ 0.17
CCDC90B-202ENST00000455220 CIDEBQ9UHD4 219 aa16.1■□□□□ 0.17
CCDC90B-202ENST00000455220 FOXD2O60548 495 aaPredicted RBP16.09■□□□□ 0.17
CCDC90B-202ENST00000455220 SLC6A12P48065 614 aa16.09■□□□□ 0.17
CCDC90B-202ENST00000455220 ATP1A2P50993 1020 aa16.09■□□□□ 0.17
CCDC90B-202ENST00000455220 SLC14A1Q13336 389 aa16.09■□□□□ 0.17
CCDC90B-202ENST00000455220 LIPMQ5VYY2 423 aa16.09■□□□□ 0.17
CCDC90B-202ENST00000455220 METTL2BQ6P1Q9 378 aaKnown RBP16.09■□□□□ 0.17
CCDC90B-202ENST00000455220 AGTRAPQ6RW13 159 aa16.09■□□□□ 0.17
CCDC90B-202ENST00000455220 PRR23CQ6ZRP0 262 aa16.09■□□□□ 0.17
CCDC90B-202ENST00000455220 KLHDC8AQ8IYD2 350 aa16.09■□□□□ 0.17
CCDC90B-202ENST00000455220 LRRC56Q8IYG6 542 aaPredicted RBP16.09■□□□□ 0.17
CCDC90B-202ENST00000455220 HMGCLL1Q8TB92 370 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms