RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 A0A0J9YY10 115 aa5.76□□□□□ -1.49
HLA-DPA3-207ENST00000454398 C2orf81A6NN90 581 aa5.76□□□□□ -1.49
HLA-DPA3-207ENST00000454398 CFAP99D6REC4 459 aa5.76□□□□□ -1.49
HLA-DPA3-207ENST00000454398 SOCS6O14544 535 aa5.76□□□□□ -1.49
HLA-DPA3-207ENST00000454398 KCNN4O15554 427 aa5.76□□□□□ -1.49
HLA-DPA3-207ENST00000454398 PJA2O43164 708 aa5.76□□□□□ -1.49
HLA-DPA3-207ENST00000454398 ZNHIT1O43257 154 aa5.76□□□□□ -1.49
HLA-DPA3-207ENST00000454398 PSTPIP1O43586 416 aa5.76□□□□□ -1.49
HLA-DPA3-207ENST00000454398 OR1I1O60431 355 aa5.76□□□□□ -1.49
HLA-DPA3-207ENST00000454398 STATHP02808 62 aa5.76□□□□□ -1.49
HLA-DPA3-207ENST00000454398 ATP1B2P14415 290 aaPredicted RBP5.76□□□□□ -1.49
HLA-DPA3-207ENST00000454398 ZFXP17010 805 aaPredicted RBP5.76□□□□□ -1.49
HLA-DPA3-207ENST00000454398 ALAS2P22557 587 aa5.76□□□□□ -1.49
HLA-DPA3-207ENST00000454398 ACRV1P26436 265 aa5.76□□□□□ -1.49
HLA-DPA3-207ENST00000454398 BDKRB1P46663 353 aa5.76□□□□□ -1.49
HLA-DPA3-207ENST00000454398 OR1D4P47884 311 aa5.76□□□□□ -1.49
HLA-DPA3-207ENST00000454398 SNRPNP63162 240 aaKnown RBP5.76□□□□□ -1.49
HLA-DPA3-207ENST00000454398 DCDP81605 110 aaKnown RBP5.76□□□□□ -1.49
HLA-DPA3-207ENST00000454398 EEF1A2Q05639 463 aaKnown RBP5.76□□□□□ -1.49
HLA-DPA3-207ENST00000454398 ZNF169Q14929 603 aaPredicted RBP5.76□□□□□ -1.49
HLA-DPA3-207ENST00000454398 ZRSR2Q15696 482 aaKnown RBP5.76□□□□□ -1.49
HLA-DPA3-207ENST00000454398 CCDC181Q5TID7 509 aa5.76□□□□□ -1.49
HLA-DPA3-207ENST00000454398 ZDHHC20Q5W0Z9 365 aa5.76□□□□□ -1.49
HLA-DPA3-207ENST00000454398 DENND5AQ6IQ26 1287 aa5.76□□□□□ -1.49
HLA-DPA3-207ENST00000454398 RHBDD2Q6NTF9 364 aa5.76□□□□□ -1.49
HLA-DPA3-207ENST00000454398 SARM1Q6SZW1 724 aa5.76□□□□□ -1.49
HLA-DPA3-207ENST00000454398 KIRREL2Q6UWL6 708 aa5.76□□□□□ -1.49
HLA-DPA3-207ENST00000454398 NCCRP1Q6ZVX7 275 aaPredicted RBP5.76□□□□□ -1.49
HLA-DPA3-207ENST00000454398 KCNMB4Q86W47 210 aa5.76□□□□□ -1.49
HLA-DPA3-207ENST00000454398 BPHLQ86WA6 291 aaPredicted RBP5.76□□□□□ -1.49
HLA-DPA3-207ENST00000454398 ZADH2Q8N4Q0 377 aa5.76□□□□□ -1.49
HLA-DPA3-207ENST00000454398 LINC01555Q8NAE3 123 aa5.76□□□□□ -1.49
HLA-DPA3-207ENST00000454398 TTC13Q8NBP0 860 aa5.76□□□□□ -1.49
HLA-DPA3-207ENST00000454398 ST6GALNAC3Q8NDV1 305 aa5.76□□□□□ -1.49
HLA-DPA3-207ENST00000454398 CFAP61Q8NHU2 1237 aa5.76□□□□□ -1.49
HLA-DPA3-207ENST00000454398 ACTL9Q8TC94 416 aa5.76□□□□□ -1.49
HLA-DPA3-207ENST00000454398 ELMO1Q92556 727 aa5.76□□□□□ -1.49
HLA-DPA3-207ENST00000454398 TFGQ92734 400 aaPredicted RBP5.76□□□□□ -1.49
HLA-DPA3-207ENST00000454398 LINC00615Q96LM1 132 aaPredicted RBP5.76□□□□□ -1.49
HLA-DPA3-207ENST00000454398 FER1L6-AS2Q96M78 137 aa5.76□□□□□ -1.49
HLA-DPA3-207ENST00000454398 SPSB2Q99619 263 aa5.76□□□□□ -1.49
HLA-DPA3-207ENST00000454398 TBL1YQ9BQ87 522 aa5.76□□□□□ -1.49
HLA-DPA3-207ENST00000454398 NDC1Q9BTX1 674 aa5.76□□□□□ -1.49
HLA-DPA3-207ENST00000454398 SYNPO2LQ9H987 977 aa5.76□□□□□ -1.49
HLA-DPA3-207ENST00000454398 ZNF160Q9HCG1 818 aa5.76□□□□□ -1.49
HLA-DPA3-207ENST00000454398 ZDHHC3Q9NYG2 299 aa5.76□□□□□ -1.49
HLA-DPA3-207ENST00000454398 PLA2G3Q9NZ20 509 aa5.76□□□□□ -1.49
HLA-DPA3-207ENST00000454398 SMARCAL1Q9NZC9 954 aa5.76□□□□□ -1.49
HLA-DPA3-207ENST00000454398 SERTAD3Q9UJW9 196 aa5.76□□□□□ -1.49
HLA-DPA3-207ENST00000454398 R3HDM2Q9Y2K5 976 aaKnown RBP5.76□□□□□ -1.49
HLA-DPA3-207ENST00000454398 HEBP2Q9Y5Z4 205 aa5.76□□□□□ -1.49
HLA-DPA3-207ENST00000454398 CPAMD8Q8IZJ3 1885 aa5.76□□□□□ -1.49
HLA-DPA3-207ENST00000454398 MED13LQ71F56 2210 aa5.76□□□□□ -1.49
HLA-DPA3-207ENST00000454398 A0A1B0GX78 115 aa5.75□□□□□ -1.49
HLA-DPA3-207ENST00000454398 IQCF5A8MTL0 148 aa5.75□□□□□ -1.49
HLA-DPA3-207ENST00000454398 ISM1B1AKI9 464 aa5.75□□□□□ -1.49
HLA-DPA3-207ENST00000454398 BHMG1C9JSJ3 638 aaPredicted RBP5.75□□□□□ -1.49
HLA-DPA3-207ENST00000454398 GOLGA6L19H0YKK7 550 aa5.75□□□□□ -1.49
HLA-DPA3-207ENST00000454398 AGPSO00116 658 aa5.75□□□□□ -1.49
HLA-DPA3-207ENST00000454398 MATN2O00339 956 aa5.75□□□□□ -1.49
HLA-DPA3-207ENST00000454398 KCNJ13O60928 360 aa5.75□□□□□ -1.49
HLA-DPA3-207ENST00000454398 KLHL18O94889 574 aa5.75□□□□□ -1.49
HLA-DPA3-207ENST00000454398 EPOP01588 193 aa5.75□□□□□ -1.49
HLA-DPA3-207ENST00000454398 F7P08709 466 aaPredicted RBP5.75□□□□□ -1.49
HLA-DPA3-207ENST00000454398 MSL3P1P0C860 447 aa5.75□□□□□ -1.49
HLA-DPA3-207ENST00000454398 RALBP11234 206 aa5.75□□□□□ -1.49
HLA-DPA3-207ENST00000454398 ELAVL4P26378 380 aaKnown RBP5.75□□□□□ -1.49
HLA-DPA3-207ENST00000454398 PKLRP30613 574 aa5.75□□□□□ -1.49
HLA-DPA3-207ENST00000454398 SHMT2P34897 504 aa5.75□□□□□ -1.49
HLA-DPA3-207ENST00000454398 GCGRP47871 477 aa5.75□□□□□ -1.49
HLA-DPA3-207ENST00000454398 NR2C2P49116 596 aa5.75□□□□□ -1.49
HLA-DPA3-207ENST00000454398 EFNA3P52797 238 aa5.75□□□□□ -1.49
HLA-DPA3-207ENST00000454398 GEMP55040 296 aa5.75□□□□□ -1.49
HLA-DPA3-207ENST00000454398 GDF10P55107 478 aa5.75□□□□□ -1.49
HLA-DPA3-207ENST00000454398 EIF3EP60228 445 aaKnown RBP5.75□□□□□ -1.49
HLA-DPA3-207ENST00000454398 YBX1P67809 324 aaKnown RBP5.75□□□□□ -1.49
HLA-DPA3-207ENST00000454398 TFDP2Q14188 446 aa5.75□□□□□ -1.49
HLA-DPA3-207ENST00000454398 SSPNQ14714 243 aa5.75□□□□□ -1.49
HLA-DPA3-207ENST00000454398 NAA30Q147X3 362 aaPredicted RBP5.75□□□□□ -1.49
HLA-DPA3-207ENST00000454398 CDSNQ15517 529 aa5.75□□□□□ -1.49
HLA-DPA3-207ENST00000454398 RBBP7Q16576 425 aa5.75□□□□□ -1.49
HLA-DPA3-207ENST00000454398 NKG7Q16617 165 aa5.75□□□□□ -1.49
HLA-DPA3-207ENST00000454398 CCSMST1Q4G0I0 132 aa5.75□□□□□ -1.49
HLA-DPA3-207ENST00000454398 TFDP3Q5H9I0 405 aa5.75□□□□□ -1.49
HLA-DPA3-207ENST00000454398 ANKRD20A2Q5SQ80 823 aa5.75□□□□□ -1.49
HLA-DPA3-207ENST00000454398 ANKRD20A1Q5TYW2 823 aa5.75□□□□□ -1.49
HLA-DPA3-207ENST00000454398 LRRC38Q5VT99 294 aa5.75□□□□□ -1.49
HLA-DPA3-207ENST00000454398 ANKRD20A3Q5VUR7 823 aa5.75□□□□□ -1.49
HLA-DPA3-207ENST00000454398 PRAMEF13Q5VWM6 474 aa5.75□□□□□ -1.49
HLA-DPA3-207ENST00000454398 B3GNTL1Q67FW5 361 aaPredicted RBP5.75□□□□□ -1.49
HLA-DPA3-207ENST00000454398 FAAH2Q6GMR7 532 aa5.75□□□□□ -1.49
HLA-DPA3-207ENST00000454398 MRPL14Q6P1L8 145 aaKnown RBP5.75□□□□□ -1.49
HLA-DPA3-207ENST00000454398 FAM180AQ6UWF9 173 aa5.75□□□□□ -1.49
HLA-DPA3-207ENST00000454398 IGFL3Q6UXB1 125 aa5.75□□□□□ -1.49
HLA-DPA3-207ENST00000454398 BBS12Q6ZW61 710 aa5.75□□□□□ -1.49
HLA-DPA3-207ENST00000454398 SNX20Q7Z614 316 aa5.75□□□□□ -1.49
HLA-DPA3-207ENST00000454398 LDB1Q86U70 411 aaPredicted RBP5.75□□□□□ -1.49
HLA-DPA3-207ENST00000454398 VSIG1Q86XK7 387 aa5.75□□□□□ -1.49
HLA-DPA3-207ENST00000454398 RHOT2Q8IXI1 618 aa5.75□□□□□ -1.49
HLA-DPA3-207ENST00000454398 KATNAL2Q8IYT4 538 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms