RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 KLHL6Q8WZ60 621 aa8.45□□□□□ -1.06
LSM5-208ENST00000450169 ISG20Q96AZ6 181 aaKnown RBP8.45□□□□□ -1.06
LSM5-208ENST00000450169 TEX37Q96LM6 180 aa8.45□□□□□ -1.06
LSM5-208ENST00000450169 KCTD15Q96SI1 283 aaPredicted RBP8.45□□□□□ -1.06
LSM5-208ENST00000450169 TGIF2Q9GZN2 237 aa8.45□□□□□ -1.06
LSM5-208ENST00000450169 SPNS1Q9H2V7 528 aa8.45□□□□□ -1.06
LSM5-208ENST00000450169 CATSPERBQ9H7T0 1116 aa8.45□□□□□ -1.06
LSM5-208ENST00000450169 SMURF1Q9HCE7 757 aa8.45□□□□□ -1.06
LSM5-208ENST00000450169 KLHL8Q9P2G9 620 aaPredicted RBP8.45□□□□□ -1.06
LSM5-208ENST00000450169 ERVW-1Q9UQF0 538 aa8.45□□□□□ -1.06
LSM5-208ENST00000450169 PKP3Q9Y446 797 aa8.45□□□□□ -1.06
LSM5-208ENST00000450169 GPR45Q9Y5Y3 372 aa8.45□□□□□ -1.06
LSM5-208ENST00000450169 UBIAD1Q9Y5Z9 338 aa8.45□□□□□ -1.06
LSM5-208ENST00000450169 U3KQ87 197 aa8.45□□□□□ -1.06
LSM5-208ENST00000450169 NT5C1B-RDH14C9J2C7 533 aa8.44□□□□□ -1.06
LSM5-208ENST00000450169 SMLR1H3BR10 107 aa8.44□□□□□ -1.06
LSM5-208ENST00000450169 K7ERI5 159 aa8.44□□□□□ -1.06
LSM5-208ENST00000450169 ANKRD28O15084 1053 aa8.44□□□□□ -1.06
LSM5-208ENST00000450169 ZNF623O75123 536 aa8.44□□□□□ -1.06
LSM5-208ENST00000450169 PAHP00439 452 aa8.44□□□□□ -1.06
LSM5-208ENST00000450169 CSF2P04141 144 aa8.44□□□□□ -1.06
LSM5-208ENST00000450169 TPH1P17752 444 aa8.44□□□□□ -1.06
LSM5-208ENST00000450169 PFKLP17858 780 aa8.44□□□□□ -1.06
LSM5-208ENST00000450169 CPN2P22792 545 aa8.44□□□□□ -1.06
LSM5-208ENST00000450169 RPS3P23396 243 aaKnown RBP eCLIP8.44□□□□□ -1.06
LSM5-208ENST00000450169 TKTL1P51854 596 aa8.44□□□□□ -1.06
LSM5-208ENST00000450169 EPHA4P54764 986 aa8.44□□□□□ -1.06
LSM5-208ENST00000450169 MTPNP58546 118 aa8.44□□□□□ -1.06
LSM5-208ENST00000450169 GPR85P60893 370 aa8.44□□□□□ -1.06
LSM5-208ENST00000450169 ALDH6A1Q02252 535 aaKnown RBP8.44□□□□□ -1.06
LSM5-208ENST00000450169 CTBP1Q13363 440 aa8.44□□□□□ -1.06
LSM5-208ENST00000450169 MAD2L1BPQ15013 274 aaPredicted RBP8.44□□□□□ -1.06
LSM5-208ENST00000450169 QPRTQ15274 297 aa8.44□□□□□ -1.06
LSM5-208ENST00000450169 TBCEQ15813 527 aaPredicted RBP8.44□□□□□ -1.06
LSM5-208ENST00000450169 STXBP2Q15833 593 aa8.44□□□□□ -1.06
LSM5-208ENST00000450169 ZNF79Q15937 498 aa8.44□□□□□ -1.06
LSM5-208ENST00000450169 TATDN3Q17R31 274 aa8.44□□□□□ -1.06
LSM5-208ENST00000450169 CDC42EP5Q6NZY7 148 aa8.44□□□□□ -1.06
LSM5-208ENST00000450169 LRRC8DQ7L1W4 858 aa8.44□□□□□ -1.06
LSM5-208ENST00000450169 HIPK1Q86Z02 1210 aa8.44□□□□□ -1.06
LSM5-208ENST00000450169 C9orf62Q8N4C0 152 aa8.44□□□□□ -1.06
LSM5-208ENST00000450169 ZNF680Q8NEM1 530 aa8.44□□□□□ -1.06
LSM5-208ENST00000450169 COQ8BQ96D53 544 aa8.44□□□□□ -1.06
LSM5-208ENST00000450169 MCCC1Q96RQ3 725 aaPredicted RBP8.44□□□□□ -1.06
LSM5-208ENST00000450169 APOL2Q9BQE5 337 aa8.44□□□□□ -1.06
LSM5-208ENST00000450169 C3orf14Q9HBI5 128 aa8.44□□□□□ -1.06
LSM5-208ENST00000450169 PDLIM7Q9NR12 457 aa8.44□□□□□ -1.06
LSM5-208ENST00000450169 CPNE7Q9UBL6 633 aa8.44□□□□□ -1.06
LSM5-208ENST00000450169 GTF2IRD1Q9UHL9 959 aa8.44□□□□□ -1.06
LSM5-208ENST00000450169 POLG2Q9UHN1 485 aa8.44□□□□□ -1.06
LSM5-208ENST00000450169 TRHDEQ9UKU6 1024 aa8.44□□□□□ -1.06
LSM5-208ENST00000450169 COL1A2P08123 1366 aa8.44□□□□□ -1.06
LSM5-208ENST00000450169 NRXN2Q9P2S2 1712 aa8.44□□□□□ -1.06
LSM5-208ENST00000450169 A0A075B6Q4 140 aa8.43□□□□□ -1.06
LSM5-208ENST00000450169 KCNK1O00180 336 aa8.43□□□□□ -1.06
LSM5-208ENST00000450169 NPPAP01160 153 aa8.43□□□□□ -1.06
LSM5-208ENST00000450169 ZNF37AP17032 561 aaPredicted RBP8.43□□□□□ -1.06
LSM5-208ENST00000450169 ALAS2P22557 587 aa8.43□□□□□ -1.06
LSM5-208ENST00000450169 ARL4AP40617 200 aa8.43□□□□□ -1.06
LSM5-208ENST00000450169 BRCC3P46736 316 aa8.43□□□□□ -1.06
LSM5-208ENST00000450169 ZFP36L2P47974 494 aaKnown RBP8.43□□□□□ -1.06
LSM5-208ENST00000450169 LIMK1P53667 647 aa8.43□□□□□ -1.06
LSM5-208ENST00000450169 SH3BP2P78314 561 aa8.43□□□□□ -1.06
LSM5-208ENST00000450169 ELP6Q0PNE2 266 aa8.43□□□□□ -1.06
LSM5-208ENST00000450169 BTN1A1Q13410 526 aa8.43□□□□□ -1.06
LSM5-208ENST00000450169 IKZF1Q13422 519 aa8.43□□□□□ -1.06
LSM5-208ENST00000450169 ANGPT1Q15389 498 aa8.43□□□□□ -1.06
LSM5-208ENST00000450169 GPR19Q15760 415 aa8.43□□□□□ -1.06
LSM5-208ENST00000450169 TAF12Q16514 161 aa8.43□□□□□ -1.06
LSM5-208ENST00000450169 PTCHD3Q3KNS1 767 aa8.43□□□□□ -1.06
LSM5-208ENST00000450169 ZNF678Q5SXM1 525 aa8.43□□□□□ -1.06
LSM5-208ENST00000450169 SLC35F1Q5T1Q4 408 aa8.43□□□□□ -1.06
LSM5-208ENST00000450169 IL31Q6EBC2 164 aa8.43□□□□□ -1.06
LSM5-208ENST00000450169 DPP9Q86TI2 863 aa8.43□□□□□ -1.06
LSM5-208ENST00000450169 GPAT4Q86UL3 456 aa8.43□□□□□ -1.06
LSM5-208ENST00000450169 RASAL3Q86YV0 1011 aa8.43□□□□□ -1.06
LSM5-208ENST00000450169 GPALPP1Q8IXQ4 340 aa8.43□□□□□ -1.06
LSM5-208ENST00000450169 AADATQ8N5Z0 425 aa8.43□□□□□ -1.06
LSM5-208ENST00000450169 ZNF366Q8N895 744 aa8.43□□□□□ -1.06
LSM5-208ENST00000450169 C7orf57Q8NEG2 295 aa8.43□□□□□ -1.06
LSM5-208ENST00000450169 VPS37AQ8NEZ2 397 aa8.43□□□□□ -1.06
LSM5-208ENST00000450169 SLC16A10Q8TF71 515 aa8.43□□□□□ -1.06
LSM5-208ENST00000450169 BCL7CQ8WUZ0 217 aaPredicted RBP8.43□□□□□ -1.06
LSM5-208ENST00000450169 TNIP3Q96KP6 325 aa8.43□□□□□ -1.06
LSM5-208ENST00000450169 HYLS1Q96M11 299 aa8.43□□□□□ -1.06
LSM5-208ENST00000450169 CAMKK2Q96RR4 588 aa8.43□□□□□ -1.06
LSM5-208ENST00000450169 FAM129BQ96TA1 746 aa8.43□□□□□ -1.06
LSM5-208ENST00000450169 COPS4Q9BT78 406 aa8.43□□□□□ -1.06
LSM5-208ENST00000450169 TBCDQ9BTW9 1192 aa8.43□□□□□ -1.06
LSM5-208ENST00000450169 ELOVL4Q9GZR5 314 aa8.43□□□□□ -1.06
LSM5-208ENST00000450169 SRRQ9GZT4 340 aa8.43□□□□□ -1.06
LSM5-208ENST00000450169 C11orf54Q9H0W9 315 aaPredicted RBP8.43□□□□□ -1.06
LSM5-208ENST00000450169 SLC6A17Q9H1V8 727 aa8.43□□□□□ -1.06
LSM5-208ENST00000450169 GORASP2Q9H8Y8 452 aa8.43□□□□□ -1.06
LSM5-208ENST00000450169 TMPRSS4Q9NRS4 437 aa8.43□□□□□ -1.06
LSM5-208ENST00000450169 RASSF1Q9NS23 344 aa8.43□□□□□ -1.06
LSM5-208ENST00000450169 ABCB8Q9NUT2 735 aa8.43□□□□□ -1.06
LSM5-208ENST00000450169 PGAP2Q9UHJ9 254 aa8.43□□□□□ -1.06
LSM5-208ENST00000450169 SCML1Q9UN30 329 aa8.43□□□□□ -1.06
LSM5-208ENST00000450169 USP3Q9Y6I4 520 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms