RNA–Protein interactions for RNA: ENST00000449880.6

ITGB4-202, Transcript of integrin subunit beta 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ITGB4, Length 5,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-202ENST00000449880 GRIA1P42261 906 aa13.66□□□□□ -0.22
ITGB4-202ENST00000449880 FAM91A1Q658Y4 838 aa13.66□□□□□ -0.22
ITGB4-202ENST00000449880 OR2T5Q6IEZ7 315 aa13.66□□□□□ -0.22
ITGB4-202ENST00000449880 CXorf57Q6NSI4 855 aaKnown RBP13.66□□□□□ -0.22
ITGB4-202ENST00000449880 ZNF367Q7RTV3 350 aa13.66□□□□□ -0.22
ITGB4-202ENST00000449880 SLC37A3Q8NCC5 494 aa13.66□□□□□ -0.22
ITGB4-202ENST00000449880 OR2T29Q8NH02 315 aa13.66□□□□□ -0.22
ITGB4-202ENST00000449880 THUMPD1Q9NXG2 353 aaKnown RBP13.66□□□□□ -0.22
ITGB4-202ENST00000449880 CD48P09326 243 aa13.66□□□□□ -0.22
ITGB4-202ENST00000449880 F8A1P23610 371 aa13.66□□□□□ -0.22
ITGB4-202ENST00000449880 HNRNPFP52597 415 aaKnown RBP13.66□□□□□ -0.22
ITGB4-202ENST00000449880 TLR1Q15399 786 aa13.66□□□□□ -0.22
ITGB4-202ENST00000449880 TMEM17Q86X19 198 aa13.66□□□□□ -0.22
ITGB4-202ENST00000449880 ADGRG2Q8IZP9 1017 aa13.66□□□□□ -0.22
ITGB4-202ENST00000449880 KLHL36Q8N4N3 616 aa13.66□□□□□ -0.22
ITGB4-202ENST00000449880 OR10G2Q8NGC3 310 aa13.66□□□□□ -0.22
ITGB4-202ENST00000449880 APOLD1Q96LR9 279 aa13.66□□□□□ -0.22
ITGB4-202ENST00000449880 TMPRSS4Q9NRS4 437 aa13.66□□□□□ -0.22
ITGB4-202ENST00000449880 FAM105AQ9NUU6 356 aa13.66□□□□□ -0.22
ITGB4-202ENST00000449880 INTS7Q9NVH2 962 aaKnown RBP13.66□□□□□ -0.22
ITGB4-202ENST00000449880 PCDHGB6Q9Y5F9 930 aa13.66□□□□□ -0.22
ITGB4-202ENST00000449880 C4BP0C0L5 1744 aa13.66□□□□□ -0.22
ITGB4-202ENST00000449880 RIIAD1A6NNX1 92 aa13.66□□□□□ -0.22
ITGB4-202ENST00000449880 GTPBP1O00178 669 aaKnown RBP13.66□□□□□ -0.22
ITGB4-202ENST00000449880 BUD23O43709 281 aaKnown RBP13.66□□□□□ -0.22
ITGB4-202ENST00000449880 GSK3BP49841 420 aa13.66□□□□□ -0.22
ITGB4-202ENST00000449880 DNASE1L3Q13609 305 aa13.66□□□□□ -0.22
ITGB4-202ENST00000449880 CHERPQ8IWX8 916 aaKnown RBP13.66□□□□□ -0.22
ITGB4-202ENST00000449880 PHC3Q8NDX5 983 aa13.66□□□□□ -0.22
ITGB4-202ENST00000449880 CMASQ8NFW8 434 aaPredicted RBP13.66□□□□□ -0.22
ITGB4-202ENST00000449880 ERLEC1Q96DZ1 483 aa13.66□□□□□ -0.22
ITGB4-202ENST00000449880 CGREF1Q99674 301 aa13.66□□□□□ -0.22
ITGB4-202ENST00000449880 AGO3Q9H9G7 860 aaKnown RBP13.66□□□□□ -0.22
ITGB4-202ENST00000449880 SLC27A5Q9Y2P5 690 aa13.66□□□□□ -0.22
ITGB4-202ENST00000449880 SMIM28A0A1B0GU29 152 aa13.66□□□□□ -0.22
ITGB4-202ENST00000449880 K7EPI3 171 aa13.66□□□□□ -0.22
ITGB4-202ENST00000449880 RPS14P62263 151 aaKnown RBP13.66□□□□□ -0.22
ITGB4-202ENST00000449880 NRG1Q02297 640 aaPredicted RBP13.66□□□□□ -0.22
ITGB4-202ENST00000449880 MXD1Q05195 221 aa13.66□□□□□ -0.22
ITGB4-202ENST00000449880 ZNF311Q5JNZ3 666 aa13.66□□□□□ -0.22
ITGB4-202ENST00000449880 ZNF613Q6PF04 617 aa13.66□□□□□ -0.22
ITGB4-202ENST00000449880 FAM98AQ8NCA5 519 aaKnown RBP13.66□□□□□ -0.22
ITGB4-202ENST00000449880 SGK2Q9HBY8 427 aa13.66□□□□□ -0.22
ITGB4-202ENST00000449880 SLC35C2Q9NQQ7 365 aa13.66□□□□□ -0.22
ITGB4-202ENST00000449880 C14orf105Q9NVL8 296 aa13.66□□□□□ -0.22
ITGB4-202ENST00000449880 HSPE1-MOB4S4R3N1 261 aa13.66□□□□□ -0.22
ITGB4-202ENST00000449880 FUOMA2VDF0 154 aa13.65□□□□□ -0.22
ITGB4-202ENST00000449880 SLC19A2O60779 497 aa13.65□□□□□ -0.22
ITGB4-202ENST00000449880 PAPSS2O95340 614 aaPredicted RBP13.65□□□□□ -0.22
ITGB4-202ENST00000449880 MTHFD1P11586 935 aaKnown RBP13.65□□□□□ -0.22
ITGB4-202ENST00000449880 COL6A1P12109 1028 aa13.65□□□□□ -0.22
ITGB4-202ENST00000449880 LAG3P18627 525 aa13.65□□□□□ -0.22
ITGB4-202ENST00000449880 GPR156Q8NFN8 814 aa13.65□□□□□ -0.22
ITGB4-202ENST00000449880 TTPALQ9BTX7 342 aa13.65□□□□□ -0.22
ITGB4-202ENST00000449880 LMAN2LQ9H0V9 348 aa13.65□□□□□ -0.22
ITGB4-202ENST00000449880 LIN28AQ9H9Z2 209 aaKnown RBP13.65□□□□□ -0.22
ITGB4-202ENST00000449880 TBC1D14Q9P2M4 693 aa13.65□□□□□ -0.22
ITGB4-202ENST00000449880 UBQLN2Q9UHD9 624 aa13.65□□□□□ -0.22
ITGB4-202ENST00000449880 MEMO1Q9Y316 297 aa13.65□□□□□ -0.22
ITGB4-202ENST00000449880 ASB3Q9Y575 518 aa13.65□□□□□ -0.22
ITGB4-202ENST00000449880 hCG_2039718K7EN88 272 aa13.65□□□□□ -0.22
ITGB4-202ENST00000449880 VNN1O95497 513 aa13.65□□□□□ -0.22
ITGB4-202ENST00000449880 SMPD1P17405 629 aa13.65□□□□□ -0.22
ITGB4-202ENST00000449880 PIK3CBP42338 1070 aa13.65□□□□□ -0.22
ITGB4-202ENST00000449880 MANFP55145 182 aaKnown RBP13.65□□□□□ -0.22
ITGB4-202ENST00000449880 PCLAFQ15004 111 aa13.65□□□□□ -0.22
ITGB4-202ENST00000449880 PLEKHG7Q6ZR37 379 aa13.65□□□□□ -0.22
ITGB4-202ENST00000449880 ZNF767PQ75MW2 155 aa13.65□□□□□ -0.22
ITGB4-202ENST00000449880 CEP68Q76N32 757 aa13.65□□□□□ -0.22
ITGB4-202ENST00000449880 ELMOD2Q8IZ81 293 aa13.65□□□□□ -0.22
ITGB4-202ENST00000449880 KLHL6Q8WZ60 621 aa13.65□□□□□ -0.22
ITGB4-202ENST00000449880 AKAP1Q92667 903 aaKnown RBP eCLIP13.65□□□□□ -0.22
ITGB4-202ENST00000449880 BPIFA1Q9NP55 256 aa13.65□□□□□ -0.22
ITGB4-202ENST00000449880 RBPJLQ9UBG7 517 aa13.65□□□□□ -0.22
ITGB4-202ENST00000449880 ATPIF1Q9UII2 106 aa13.65□□□□□ -0.22
ITGB4-202ENST00000449880 ADAMTS6Q9UKP5 1117 aa13.65□□□□□ -0.22
ITGB4-202ENST00000449880 ASF1AQ9Y294 204 aa13.65□□□□□ -0.22
ITGB4-202ENST00000449880 ZNF487B1APH4 448 aa13.65□□□□□ -0.22
ITGB4-202ENST00000449880 H7C2Y5 167 aa13.65□□□□□ -0.22
ITGB4-202ENST00000449880 SLC25A14O95258 325 aaPredicted RBP13.65□□□□□ -0.22
ITGB4-202ENST00000449880 ELFN1P0C7U0 828 aa13.65□□□□□ -0.22
ITGB4-202ENST00000449880 CXCR3P49682 368 aa13.65□□□□□ -0.22
ITGB4-202ENST00000449880 TUSC3Q13454 348 aa13.65□□□□□ -0.22
ITGB4-202ENST00000449880 EIF5AL1Q6IS14 154 aaKnown RBP13.65□□□□□ -0.22
ITGB4-202ENST00000449880 CPNE9Q8IYJ1 553 aa13.65□□□□□ -0.22
ITGB4-202ENST00000449880 PRICKLE1Q96MT3 831 aaPredicted RBP13.65□□□□□ -0.22
ITGB4-202ENST00000449880 FERD3LQ96RJ6 166 aa13.65□□□□□ -0.22
ITGB4-202ENST00000449880 RC3H2Q9HBD1 1191 aaKnown RBP13.65□□□□□ -0.22
ITGB4-202ENST00000449880 TM9SF3Q9HD45 589 aa13.65□□□□□ -0.22
ITGB4-202ENST00000449880 MTMR10Q9NXD2 777 aa13.65□□□□□ -0.22
ITGB4-202ENST00000449880 MYH3P11055 1940 aa13.65□□□□□ -0.22
ITGB4-202ENST00000449880 A0A1W2PP18 115 aa13.65□□□□□ -0.22
ITGB4-202ENST00000449880 RHOQP17081 205 aa13.65□□□□□ -0.22
ITGB4-202ENST00000449880 YAP1P46937 504 aaKnown RBP13.65□□□□□ -0.22
ITGB4-202ENST00000449880 YBEYP58557 167 aaPredicted RBP13.65□□□□□ -0.22
ITGB4-202ENST00000449880 BTBD16Q32M84 506 aa13.65□□□□□ -0.22
ITGB4-202ENST00000449880 POM121L1PQ3SYA9 428 aa13.65□□□□□ -0.22
ITGB4-202ENST00000449880 TBRG1Q3YBR2 411 aa13.65□□□□□ -0.22
ITGB4-202ENST00000449880 CAPN13Q6MZZ7 669 aaPredicted RBP13.65□□□□□ -0.22
ITGB4-202ENST00000449880 PCDH19Q8TAB3 1148 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms