RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 CDYLQ9Y232 598 aa14.76□□□□□ -0.05
CHD3-205ENST00000449744 ASH1LQ9NR48 2969 aaKnown RBP14.76□□□□□ -0.05
CHD3-205ENST00000449744 ZNF749O43361 778 aa14.75□□□□□ -0.05
CHD3-205ENST00000449744 RFPL1O75677 317 aa14.75□□□□□ -0.05
CHD3-205ENST00000449744 RAB40ALP0C0E4 278 aa14.75□□□□□ -0.05
CHD3-205ENST00000449744 TPBGLP0DKB5 382 aa14.75□□□□□ -0.05
CHD3-205ENST00000449744 AGXTP21549 392 aa14.75□□□□□ -0.05
CHD3-205ENST00000449744 RPS3P23396 243 aaKnown RBP eCLIP14.75□□□□□ -0.05
CHD3-205ENST00000449744 PKLRP30613 574 aa14.75□□□□□ -0.05
CHD3-205ENST00000449744 RORAP35398 523 aa14.75□□□□□ -0.05
CHD3-205ENST00000449744 KCNC4Q03721 635 aa14.75□□□□□ -0.05
CHD3-205ENST00000449744 KYNUQ16719 465 aa14.75□□□□□ -0.05
CHD3-205ENST00000449744 UGT8Q16880 541 aa14.75□□□□□ -0.05
CHD3-205ENST00000449744 SLC5A12Q1EHB4 618 aa14.75□□□□□ -0.05
CHD3-205ENST00000449744 LACTB2Q53H82 288 aaPredicted RBP14.75□□□□□ -0.05
CHD3-205ENST00000449744 ZNF789Q5FWF6 425 aa14.75□□□□□ -0.05
CHD3-205ENST00000449744 RNF187Q5TA31 235 aaPredicted RBP14.75□□□□□ -0.05
CHD3-205ENST00000449744 ZNF517Q6ZMY9 492 aaPredicted RBP14.75□□□□□ -0.05
CHD3-205ENST00000449744 OTOAQ7RTW8 1153 aa14.75□□□□□ -0.05
CHD3-205ENST00000449744 SYTL1Q8IYJ3 562 aa14.75□□□□□ -0.05
CHD3-205ENST00000449744 RASGEF1CQ8N431 466 aa14.75□□□□□ -0.05
CHD3-205ENST00000449744 SLC22A18Q96BI1 424 aa14.75□□□□□ -0.05
CHD3-205ENST00000449744 MS4A14Q96JA4 679 aa14.75□□□□□ -0.05
CHD3-205ENST00000449744 CLMPQ9H6B4 373 aa14.75□□□□□ -0.05
CHD3-205ENST00000449744 FAM60AQ9NP50 221 aa14.75□□□□□ -0.05
CHD3-205ENST00000449744 PCMTD2Q9NV79 361 aa14.75□□□□□ -0.05
CHD3-205ENST00000449744 SAMD15Q9P1V8 674 aa14.75□□□□□ -0.05
CHD3-205ENST00000449744 MRFAP1Q9Y605 127 aa14.75□□□□□ -0.05
CHD3-205ENST00000449744 C9J4A7 227 aa14.74□□□□□ -0.05
CHD3-205ENST00000449744 GOLGA8KD6RF30 607 aa14.74□□□□□ -0.05
CHD3-205ENST00000449744 GOLGA8TH3BQL2 631 aa14.74□□□□□ -0.05
CHD3-205ENST00000449744 OR2B3O76000 313 aa14.74□□□□□ -0.05
CHD3-205ENST00000449744 SLCO2B1O94956 709 aa14.74□□□□□ -0.05
CHD3-205ENST00000449744 WISP1O95388 367 aa14.74□□□□□ -0.05
CHD3-205ENST00000449744 CD9P21926 228 aa14.74□□□□□ -0.05
CHD3-205ENST00000449744 PMS2P54278 862 aa14.74□□□□□ -0.05
CHD3-205ENST00000449744 KCNJ11Q14654 390 aa14.74□□□□□ -0.05
CHD3-205ENST00000449744 DEFB110Q30KQ9 67 aa14.74□□□□□ -0.05
CHD3-205ENST00000449744 PTCHD3Q3KNS1 767 aa14.74□□□□□ -0.05
CHD3-205ENST00000449744 ARMC3Q5W041 872 aa14.74□□□□□ -0.05
CHD3-205ENST00000449744 TTC27Q6P3X3 843 aa14.74□□□□□ -0.05
CHD3-205ENST00000449744 CCDC137Q6PK04 289 aaKnown RBP14.74□□□□□ -0.05
CHD3-205ENST00000449744 RAB42Q8N4Z0 105 aa14.74□□□□□ -0.05
CHD3-205ENST00000449744 ENDOVQ8N8Q3 282 aaKnown RBP14.74□□□□□ -0.05
CHD3-205ENST00000449744 FOPNLQ96NB1 174 aa14.74□□□□□ -0.05
CHD3-205ENST00000449744 DPH2Q9BQC3 489 aaPredicted RBP14.74□□□□□ -0.05
CHD3-205ENST00000449744 NLNQ9BYT8 704 aa14.74□□□□□ -0.05
CHD3-205ENST00000449744 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.74□□□□□ -0.05
CHD3-205ENST00000449744 CIDEBQ9UHD4 219 aa14.74□□□□□ -0.05
CHD3-205ENST00000449744 ANAPC2Q9UJX6 822 aa14.74□□□□□ -0.05
CHD3-205ENST00000449744 AP1M2Q9Y6Q5 423 aa14.74□□□□□ -0.05
CHD3-205ENST00000449744 H3BMM5 538 aa14.73□□□□□ -0.05
CHD3-205ENST00000449744 PGRMC1O00264 195 aaKnown RBP14.73□□□□□ -0.05
CHD3-205ENST00000449744 ZSCAN12O43309 604 aa14.73□□□□□ -0.05
CHD3-205ENST00000449744 AVILO75366 819 aa14.73□□□□□ -0.05
CHD3-205ENST00000449744 ARNTP27540 789 aa14.73□□□□□ -0.05
CHD3-205ENST00000449744 PEBP1P30086 187 aaKnown RBP14.73□□□□□ -0.05
CHD3-205ENST00000449744 FMO4P31512 558 aa14.73□□□□□ -0.05
CHD3-205ENST00000449744 COILP38432 576 aaPredicted RBP14.73□□□□□ -0.05
CHD3-205ENST00000449744 MAGEA6P43360 314 aa14.73□□□□□ -0.05
CHD3-205ENST00000449744 ZIC1Q15915 447 aa14.73□□□□□ -0.05
CHD3-205ENST00000449744 KIAA0930Q6ICG6 404 aaPredicted RBP14.73□□□□□ -0.05
CHD3-205ENST00000449744 LCN10Q6JVE6 187 aa14.73□□□□□ -0.05
CHD3-205ENST00000449744 TAX1BP1Q86VP1 789 aa14.73□□□□□ -0.05
CHD3-205ENST00000449744 APLFQ8IW19 511 aaPredicted RBP14.73□□□□□ -0.05
CHD3-205ENST00000449744 C2orf73Q8N5S3 287 aaPredicted RBP14.73□□□□□ -0.05
CHD3-205ENST00000449744 FLVCR1-AS1Q8TAF5 88 aa14.73□□□□□ -0.05
CHD3-205ENST00000449744 RAD51AP1Q96B01 352 aa14.73□□□□□ -0.05
CHD3-205ENST00000449744 IL17FQ96PD4 163 aa14.73□□□□□ -0.05
CHD3-205ENST00000449744 TCF12Q99081 682 aa14.73□□□□□ -0.05
CHD3-205ENST00000449744 C17orf62Q9BQA9 187 aa14.73□□□□□ -0.05
CHD3-205ENST00000449744 RAB11FIP5Q9BXF6 653 aa14.73□□□□□ -0.05
CHD3-205ENST00000449744 CHRNA10Q9GZZ6 450 aa14.73□□□□□ -0.05
CHD3-205ENST00000449744 GRPEL1Q9HAV7 217 aa14.73□□□□□ -0.05
CHD3-205ENST00000449744 TXLNGQ9NUQ3 528 aa14.73□□□□□ -0.05
CHD3-205ENST00000449744 INTS7Q9NVH2 962 aaKnown RBP14.73□□□□□ -0.05
CHD3-205ENST00000449744 TCFL5Q9UL49 500 aa14.73□□□□□ -0.05
CHD3-205ENST00000449744 PLCL2Q9UPR0 1127 aa14.73□□□□□ -0.05
CHD3-205ENST00000449744 TP53TG5Q9Y2B4 290 aa14.73□□□□□ -0.05
CHD3-205ENST00000449744 SPTA1P02549 2419 aa14.72□□□□□ -0.05
CHD3-205ENST00000449744 GOLGA6L10A0A0M3HER8 536 aa14.72□□□□□ -0.05
CHD3-205ENST00000449744 MAGEB16A2A368 324 aa14.72□□□□□ -0.05
CHD3-205ENST00000449744 ARGFXA6NJG6 315 aa14.72□□□□□ -0.05
CHD3-205ENST00000449744 SDR42E2A6NKP2 422 aa14.72□□□□□ -0.05
CHD3-205ENST00000449744 RASGRF2O14827 1237 aa14.72□□□□□ -0.05
CHD3-205ENST00000449744 ZSCAN9O15535 394 aaPredicted RBP14.72□□□□□ -0.05
CHD3-205ENST00000449744 S1PR4O95977 384 aa14.72□□□□□ -0.05
CHD3-205ENST00000449744 MLNP12872 115 aa14.72□□□□□ -0.05
CHD3-205ENST00000449744 CHRM3P20309 590 aa14.72□□□□□ -0.05
CHD3-205ENST00000449744 OGNP20774 298 aaKnown RBP14.72□□□□□ -0.05
CHD3-205ENST00000449744 MAGP20916 626 aa14.72□□□□□ -0.05
CHD3-205ENST00000449744 CSRP3P50461 194 aa14.72□□□□□ -0.05
CHD3-205ENST00000449744 TLE1Q04724 770 aa14.72□□□□□ -0.05
CHD3-205ENST00000449744 IL10RAQ13651 578 aa14.72□□□□□ -0.05
CHD3-205ENST00000449744 DHX34Q14147 1143 aaKnown RBP14.72□□□□□ -0.05
CHD3-205ENST00000449744 SF1Q15637 639 aaKnown RBP14.72□□□□□ -0.05
CHD3-205ENST00000449744 CYP1B1Q16678 543 aa14.72□□□□□ -0.05
CHD3-205ENST00000449744 TYSND1Q2T9J0 566 aa14.72□□□□□ -0.05
CHD3-205ENST00000449744 CTSL3PQ5NE16 218 aa14.72□□□□□ -0.05
CHD3-205ENST00000449744 ANKRD22Q5VYY1 191 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms