RNA–Protein interactions for RNA: ENST00000447360.6

LRRC28-203, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-203ENST00000447360 ITGA9Q13797 1035 aa6.81□□□□□ -1.32
LRRC28-203ENST00000447360 PIGHQ14442 188 aaPredicted RBP6.81□□□□□ -1.32
LRRC28-203ENST00000447360 KRT81Q14533 505 aa6.81□□□□□ -1.32
LRRC28-203ENST00000447360 SLC14A2Q15849 920 aa6.81□□□□□ -1.32
LRRC28-203ENST00000447360 NKG7Q16617 165 aa6.81□□□□□ -1.32
LRRC28-203ENST00000447360 FNBP1LQ5T0N5 605 aa6.81□□□□□ -1.32
LRRC28-203ENST00000447360 GPRC6AQ5T6X5 926 aa6.81□□□□□ -1.32
LRRC28-203ENST00000447360 NCBP2-AS2Q69YL0 99 aa6.81□□□□□ -1.32
LRRC28-203ENST00000447360 CCDC70Q6NSX1 233 aa6.81□□□□□ -1.32
LRRC28-203ENST00000447360 SPESP1Q6UW49 350 aa6.81□□□□□ -1.32
LRRC28-203ENST00000447360 MEX3BQ6ZN04 569 aaKnown RBP6.81□□□□□ -1.32
LRRC28-203ENST00000447360 Q6ZPB1 254 aaPredicted RBP6.81□□□□□ -1.32
LRRC28-203ENST00000447360 HOOK3Q86VS8 718 aa6.81□□□□□ -1.32
LRRC28-203ENST00000447360 AMIGO1Q86WK6 493 aa6.81□□□□□ -1.32
LRRC28-203ENST00000447360 CPNE8Q86YQ8 564 aa6.81□□□□□ -1.32
LRRC28-203ENST00000447360 VSTM4Q8IW00 320 aa6.81□□□□□ -1.32
LRRC28-203ENST00000447360 TMEM151BQ8IW70 566 aa6.81□□□□□ -1.32
LRRC28-203ENST00000447360 ADGRF3Q8IZF5 1079 aa6.81□□□□□ -1.32
LRRC28-203ENST00000447360 ZNF655Q8N720 491 aaPredicted RBP6.81□□□□□ -1.32
LRRC28-203ENST00000447360 RNF214Q8ND24 703 aa6.81□□□□□ -1.32
LRRC28-203ENST00000447360 OR8K1Q8NGG5 319 aa6.81□□□□□ -1.32
LRRC28-203ENST00000447360 FAM71BQ8TC56 605 aa6.81□□□□□ -1.32
LRRC28-203ENST00000447360 THAP3Q8WTV1 239 aaPredicted RBP6.81□□□□□ -1.32
LRRC28-203ENST00000447360 DLG3Q92796 817 aa6.81□□□□□ -1.32
LRRC28-203ENST00000447360 TADA1Q96BN2 335 aa6.81□□□□□ -1.32
LRRC28-203ENST00000447360 TRIM11Q96F44 468 aa6.81□□□□□ -1.32
LRRC28-203ENST00000447360 IMP4Q96G21 291 aaKnown RBP6.81□□□□□ -1.32
LRRC28-203ENST00000447360 LINC00615Q96LM1 132 aaPredicted RBP6.81□□□□□ -1.32
LRRC28-203ENST00000447360 DNAJC7Q99615 494 aa6.81□□□□□ -1.32
LRRC28-203ENST00000447360 SPSB2Q99619 263 aa6.81□□□□□ -1.32
LRRC28-203ENST00000447360 CHP1Q99653 195 aa6.81□□□□□ -1.32
LRRC28-203ENST00000447360 PACSIN1Q9BY11 444 aa6.81□□□□□ -1.32
LRRC28-203ENST00000447360 KLHL25Q9H0H3 589 aa6.81□□□□□ -1.32
LRRC28-203ENST00000447360 TSPY26PQ9H489 355 aa6.81□□□□□ -1.32
LRRC28-203ENST00000447360 TRABDQ9H4I3 376 aa6.81□□□□□ -1.32
LRRC28-203ENST00000447360 FAM60AQ9NP50 221 aa6.81□□□□□ -1.32
LRRC28-203ENST00000447360 ACTR10Q9NZ32 417 aa6.81□□□□□ -1.32
LRRC28-203ENST00000447360 ZNF835Q9Y2P0 537 aa6.81□□□□□ -1.32
LRRC28-203ENST00000447360 MEMO1Q9Y316 297 aa6.81□□□□□ -1.32
LRRC28-203ENST00000447360 MRPS2Q9Y399 296 aaKnown RBP6.81□□□□□ -1.32
LRRC28-203ENST00000447360 PCDHGB6Q9Y5F9 930 aa6.81□□□□□ -1.32
LRRC28-203ENST00000447360 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.81□□□□□ -1.32
LRRC28-203ENST00000447360 FLNAP21333 2647 aaKnown RBP6.8□□□□□ -1.32
LRRC28-203ENST00000447360 C17orf113A0A1B0GUU1 675 aa6.8□□□□□ -1.32
LRRC28-203ENST00000447360 A0A1B0GX78 115 aa6.8□□□□□ -1.32
LRRC28-203ENST00000447360 FOXO6A8MYZ6 492 aa6.8□□□□□ -1.32
LRRC28-203ENST00000447360 COL6A5A8TX70 2615 aa6.8□□□□□ -1.32
LRRC28-203ENST00000447360 AURKAO14965 403 aa6.8□□□□□ -1.32
LRRC28-203ENST00000447360 HCRTR1O43613 425 aa6.8□□□□□ -1.32
LRRC28-203ENST00000447360 UGT1A9O60656 530 aa6.8□□□□□ -1.32
LRRC28-203ENST00000447360 MT-CYBP00156 380 aaPredicted RBP6.8□□□□□ -1.32
LRRC28-203ENST00000447360 HPP00738 406 aa6.8□□□□□ -1.32
LRRC28-203ENST00000447360 IGFBP2P18065 325 aa6.8□□□□□ -1.32
LRRC28-203ENST00000447360 UGT1A6P19224 532 aa6.8□□□□□ -1.32
LRRC28-203ENST00000447360 MSH3P20585 1137 aa6.8□□□□□ -1.32
LRRC28-203ENST00000447360 UGT1A1P22309 533 aa6.8□□□□□ -1.32
LRRC28-203ENST00000447360 UGT1A4P22310 534 aa6.8□□□□□ -1.32
LRRC28-203ENST00000447360 ALAS2P22557 587 aa6.8□□□□□ -1.32
LRRC28-203ENST00000447360 PBLDP30039 288 aaPredicted RBP6.8□□□□□ -1.32
LRRC28-203ENST00000447360 DNAJA1P31689 397 aaKnown RBP6.8□□□□□ -1.32
LRRC28-203ENST00000447360 SPAM1P38567 509 aa6.8□□□□□ -1.32
LRRC28-203ENST00000447360 ARSEP51690 589 aa6.8□□□□□ -1.32
LRRC28-203ENST00000447360 ARSFP54793 590 aa6.8□□□□□ -1.32
LRRC28-203ENST00000447360 IFI35P80217 286 aaPredicted RBP6.8□□□□□ -1.32
LRRC28-203ENST00000447360 SLC25A11Q02978 314 aaKnown RBP6.8□□□□□ -1.32
LRRC28-203ENST00000447360 TBX2Q13207 712 aaPredicted RBP6.8□□□□□ -1.32
LRRC28-203ENST00000447360 ZIC1Q15915 447 aa6.8□□□□□ -1.32
LRRC28-203ENST00000447360 PPP2R5EQ16537 467 aa6.8□□□□□ -1.32
LRRC28-203ENST00000447360 SLC18A3Q16572 532 aa6.8□□□□□ -1.32
LRRC28-203ENST00000447360 RBBP7Q16576 425 aa6.8□□□□□ -1.32
LRRC28-203ENST00000447360 C3AR1Q16581 482 aa6.8□□□□□ -1.32
LRRC28-203ENST00000447360 BCL7AQ4VC05 210 aa6.8□□□□□ -1.32
LRRC28-203ENST00000447360 ATP13A4Q4VNC1 1196 aa6.8□□□□□ -1.32
LRRC28-203ENST00000447360 KRTCAP3Q53RY4 240 aa6.8□□□□□ -1.32
LRRC28-203ENST00000447360 OXLD1Q5BKU9 147 aa6.8□□□□□ -1.32
LRRC28-203ENST00000447360 SARM1Q6SZW1 724 aa6.8□□□□□ -1.32
LRRC28-203ENST00000447360 NT5DC3Q86UY8 548 aa6.8□□□□□ -1.32
LRRC28-203ENST00000447360 SPPL2CQ8IUH8 684 aa6.8□□□□□ -1.32
LRRC28-203ENST00000447360 KBTBD2Q8IY47 623 aa6.8□□□□□ -1.32
LRRC28-203ENST00000447360 CFAP206Q8IYR0 622 aa6.8□□□□□ -1.32
LRRC28-203ENST00000447360 CNTD1Q8N815 330 aa6.8□□□□□ -1.32
LRRC28-203ENST00000447360 NIPA2Q8N8Q9 360 aa6.8□□□□□ -1.32
LRRC28-203ENST00000447360 CCNYQ8ND76 341 aa6.8□□□□□ -1.32
LRRC28-203ENST00000447360 OR52E1Q8NGJ3 308 aa6.8□□□□□ -1.32
LRRC28-203ENST00000447360 SUN3Q8TAQ9 357 aa6.8□□□□□ -1.32
LRRC28-203ENST00000447360 CCDC110Q8TBZ0 833 aa6.8□□□□□ -1.32
LRRC28-203ENST00000447360 NANOS1Q8WY41 292 aaKnown RBP6.8□□□□□ -1.32
LRRC28-203ENST00000447360 PSMF1Q92530 271 aa6.8□□□□□ -1.32
LRRC28-203ENST00000447360 NINJ1Q92982 152 aa6.8□□□□□ -1.32
LRRC28-203ENST00000447360 MAGED4Q96JG8 741 aa6.8□□□□□ -1.32
LRRC28-203ENST00000447360 RMDN2Q96LZ7 410 aa6.8□□□□□ -1.32
LRRC28-203ENST00000447360 FERD3LQ96RJ6 166 aa6.8□□□□□ -1.32
LRRC28-203ENST00000447360 RNF32Q9H0A6 362 aa6.8□□□□□ -1.32
LRRC28-203ENST00000447360 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.8□□□□□ -1.32
LRRC28-203ENST00000447360 MVB12BQ9H7P6 319 aa6.8□□□□□ -1.32
LRRC28-203ENST00000447360 UGT1A7Q9HAW7 530 aa6.8□□□□□ -1.32
LRRC28-203ENST00000447360 UGT1A10Q9HAW8 530 aa6.8□□□□□ -1.32
LRRC28-203ENST00000447360 UGT1A8Q9HAW9 530 aa6.8□□□□□ -1.32
LRRC28-203ENST00000447360 BPIFA1Q9NP55 256 aa6.8□□□□□ -1.32
LRRC28-203ENST00000447360 SMOXQ9NWM0 555 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms