RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 CCDC90BQ9GZT6 254 aa18.67■□□□□ 0.58
SDCBP-204ENST00000447182 TNKS2Q9H2K2 1166 aa18.67■□□□□ 0.58
SDCBP-204ENST00000447182 PLXNA4Q9HCM2 1894 aa18.67■□□□□ 0.58
SDCBP-204ENST00000447182 FBXO8Q9NRD0 319 aa18.67■□□□□ 0.58
SDCBP-204ENST00000447182 SLC6A13Q9NSD5 602 aa18.67■□□□□ 0.58
SDCBP-204ENST00000447182 TSR3Q9UJK0 312 aaKnown RBP18.67■□□□□ 0.58
SDCBP-204ENST00000447182 ERVW-1Q9UQF0 538 aa18.67■□□□□ 0.58
SDCBP-204ENST00000447182 A0A0U1RQS6 177 aa18.66■□□□□ 0.58
SDCBP-204ENST00000447182 MANBAO00462 879 aa18.66■□□□□ 0.58
SDCBP-204ENST00000447182 XPNPEP2O43895 674 aa18.66■□□□□ 0.58
SDCBP-204ENST00000447182 FZD6O60353 706 aa18.66■□□□□ 0.58
SDCBP-204ENST00000447182 CD160O95971 181 aa18.66■□□□□ 0.58
SDCBP-204ENST00000447182 HOXB9P17482 250 aaPredicted RBP18.66■□□□□ 0.58
SDCBP-204ENST00000447182 DGKAP23743 735 aa18.66■□□□□ 0.58
SDCBP-204ENST00000447182 PIK3CGP48736 1102 aa18.66■□□□□ 0.58
SDCBP-204ENST00000447182 ARF5P84085 180 aa18.66■□□□□ 0.58
SDCBP-204ENST00000447182 KEAP1Q14145 624 aa18.66■□□□□ 0.58
SDCBP-204ENST00000447182 CPZQ66K79 652 aa18.66■□□□□ 0.58
SDCBP-204ENST00000447182 NCCRP1Q6ZVX7 275 aaPredicted RBP18.66■□□□□ 0.58
SDCBP-204ENST00000447182 CNIH3Q8TBE1 160 aa18.66■□□□□ 0.58
SDCBP-204ENST00000447182 MCOLN3Q8TDD5 553 aa18.66■□□□□ 0.58
SDCBP-204ENST00000447182 EID2BQ96D98 161 aa18.66■□□□□ 0.58
SDCBP-204ENST00000447182 YIPF6Q96EC8 236 aa18.66■□□□□ 0.58
SDCBP-204ENST00000447182 SERHLQ9NQF3 203 aa18.66■□□□□ 0.58
SDCBP-204ENST00000447182 WWOXQ9NZC7 414 aa18.66■□□□□ 0.58
SDCBP-204ENST00000447182 FBXO10Q9UK96 956 aa18.66■□□□□ 0.58
SDCBP-204ENST00000447182 A0A1B0GVM2 712 aa18.65■□□□□ 0.58
SDCBP-204ENST00000447182 PER2O15055 1255 aa18.65■□□□□ 0.58
SDCBP-204ENST00000447182 AXIN1O15169 862 aa18.65■□□□□ 0.58
SDCBP-204ENST00000447182 ASGR1P07306 291 aa18.65■□□□□ 0.58
SDCBP-204ENST00000447182 BCKDHAP12694 445 aa18.65■□□□□ 0.58
SDCBP-204ENST00000447182 IGFBP5P24593 272 aa18.65■□□□□ 0.58
SDCBP-204ENST00000447182 CD6P30203 668 aa18.65■□□□□ 0.58
SDCBP-204ENST00000447182 PHC1P78364 1004 aa18.65■□□□□ 0.58
SDCBP-204ENST00000447182 SLC35A2P78381 396 aa18.65■□□□□ 0.58
SDCBP-204ENST00000447182 FAM189BP81408 668 aa18.65■□□□□ 0.58
SDCBP-204ENST00000447182 IL5RAQ01344 420 aa18.65■□□□□ 0.58
SDCBP-204ENST00000447182 SMARCB1Q12824 385 aa18.65■□□□□ 0.58
SDCBP-204ENST00000447182 CAPN13Q6MZZ7 669 aaPredicted RBP18.65■□□□□ 0.58
SDCBP-204ENST00000447182 RNF19BQ6ZMZ0 732 aa18.65■□□□□ 0.58
SDCBP-204ENST00000447182 FAM193BQ96PV7 902 aaPredicted RBP18.65■□□□□ 0.58
SDCBP-204ENST00000447182 EGFL8Q99944 293 aa18.65■□□□□ 0.58
SDCBP-204ENST00000447182 CWH43Q9H720 699 aa18.65■□□□□ 0.58
SDCBP-204ENST00000447182 EXD2Q9NVH0 621 aa18.65■□□□□ 0.58
SDCBP-204ENST00000447182 TPRKBQ9Y3C4 175 aa18.65■□□□□ 0.58
SDCBP-204ENST00000447182 WNT9AO14904 365 aa18.65■□□□□ 0.58
SDCBP-204ENST00000447182 ADAMTS4O75173 837 aa18.65■□□□□ 0.58
SDCBP-204ENST00000447182 GDF5P43026 501 aa18.65■□□□□ 0.58
SDCBP-204ENST00000447182 ABHD18Q0P651 414 aa18.65■□□□□ 0.58
SDCBP-204ENST00000447182 PHKG1Q16816 387 aa18.65■□□□□ 0.58
SDCBP-204ENST00000447182 DGUOKQ16854 277 aa18.65■□□□□ 0.58
SDCBP-204ENST00000447182 ADPRMQ3LIE5 342 aa18.65■□□□□ 0.58
SDCBP-204ENST00000447182 SYT6Q5T7P8 510 aaPredicted RBP18.65■□□□□ 0.58
SDCBP-204ENST00000447182 NEK10Q6ZWH5 1172 aa18.65■□□□□ 0.58
SDCBP-204ENST00000447182 B3GNT8Q7Z7M8 397 aa18.65■□□□□ 0.58
SDCBP-204ENST00000447182 SERPINA9Q86WD7 417 aa18.65■□□□□ 0.58
SDCBP-204ENST00000447182 DENND1CQ8IV53 801 aa18.65■□□□□ 0.58
SDCBP-204ENST00000447182 RBFAQ8N0V3 343 aa18.65■□□□□ 0.58
SDCBP-204ENST00000447182 C10orf111Q8N326 155 aa18.65■□□□□ 0.58
SDCBP-204ENST00000447182 TMEM132CQ8N3T6 1108 aa18.65■□□□□ 0.58
SDCBP-204ENST00000447182 NAT16Q8N8M0 369 aa18.65■□□□□ 0.58
SDCBP-204ENST00000447182 CCDC97Q96F63 343 aaPredicted RBP18.65■□□□□ 0.58
SDCBP-204ENST00000447182 PSD2Q9BQI7 771 aa18.65■□□□□ 0.58
SDCBP-204ENST00000447182 SLC29A3Q9BZD2 475 aa18.65■□□□□ 0.58
SDCBP-204ENST00000447182 GPR63Q9BZJ6 419 aa18.65■□□□□ 0.58
SDCBP-204ENST00000447182 PCDHGA10Q9Y5H3 936 aa18.65■□□□□ 0.58
SDCBP-204ENST00000447182 U3KQV3 271 aa18.65■□□□□ 0.58
SDCBP-204ENST00000447182 SLC38A8A6NNN8 435 aa18.64■□□□□ 0.57
SDCBP-204ENST00000447182 JRKO75564 520 aa18.64■□□□□ 0.57
SDCBP-204ENST00000447182 FTH1P02794 183 aa18.64■□□□□ 0.57
SDCBP-204ENST00000447182 ALOX5P09917 674 aa18.64■□□□□ 0.57
SDCBP-204ENST00000447182 PTPN6P29350 595 aa18.64■□□□□ 0.57
SDCBP-204ENST00000447182 HALP42357 657 aa18.64■□□□□ 0.57
SDCBP-204ENST00000447182 SGSHP51688 502 aa18.64■□□□□ 0.57
SDCBP-204ENST00000447182 CLDN8P56748 225 aa18.64■□□□□ 0.57
SDCBP-204ENST00000447182 CES5AQ6NT32 575 aa18.64■□□□□ 0.57
SDCBP-204ENST00000447182 CYP4Z1Q86W10 505 aa18.64■□□□□ 0.57
SDCBP-204ENST00000447182 MFSD4AQ8N468 514 aa18.64■□□□□ 0.57
SDCBP-204ENST00000447182 LKAAEAR1Q8TD35 194 aa18.64■□□□□ 0.57
SDCBP-204ENST00000447182 ZFP90Q8TF47 636 aa18.64■□□□□ 0.57
SDCBP-204ENST00000447182 ITCHQ96J02 903 aa18.64■□□□□ 0.57
SDCBP-204ENST00000447182 GPR62Q9BZJ7 368 aa18.64■□□□□ 0.57
SDCBP-204ENST00000447182 RDH14Q9HBH5 336 aa18.64■□□□□ 0.57
SDCBP-204ENST00000447182 VNN3Q9NY84 501 aa18.64■□□□□ 0.57
SDCBP-204ENST00000447182 LOC730098B7Z3J9 87 aa18.64■□□□□ 0.57
SDCBP-204ENST00000447182 M0R3G1 203 aa18.64■□□□□ 0.57
SDCBP-204ENST00000447182 ARVCFO00192 962 aa18.64■□□□□ 0.57
SDCBP-204ENST00000447182 MRPS14O60783 128 aaKnown RBP18.64■□□□□ 0.57
SDCBP-204ENST00000447182 PRAMEF12O95522 483 aa18.64■□□□□ 0.57
SDCBP-204ENST00000447182 SERPINB10P48595 397 aa18.64■□□□□ 0.57
SDCBP-204ENST00000447182 HNRNPFP52597 415 aaKnown RBP18.64■□□□□ 0.57
SDCBP-204ENST00000447182 NPTX1Q15818 432 aa18.64■□□□□ 0.57
SDCBP-204ENST00000447182 RNF219Q5W0B1 726 aaPredicted RBP18.64■□□□□ 0.57
SDCBP-204ENST00000447182 CXorf57Q6NSI4 855 aaKnown RBP18.64■□□□□ 0.57
SDCBP-204ENST00000447182 SNX20Q7Z614 316 aa18.64■□□□□ 0.57
SDCBP-204ENST00000447182 ZDHHC21Q8IVQ6 265 aa18.64■□□□□ 0.57
SDCBP-204ENST00000447182 LINC01599Q8WXQ3 324 aa18.64■□□□□ 0.57
SDCBP-204ENST00000447182 PLD4Q96BZ4 506 aa18.64■□□□□ 0.57
SDCBP-204ENST00000447182 ZNF300Q96RE9 604 aaPredicted RBP18.64■□□□□ 0.57
SDCBP-204ENST00000447182 C19orf43Q9BQ61 176 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms