RNA–Protein interactions for RNA: ENST00000447124.1

SDC1-205, Transcript of syndecan 1, humanhuman

TSL 4

Gene SDC1, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-205ENST00000447124 SYBUQ9NX95 663 aa20.03■□□□□ 0.8
SDC1-205ENST00000447124 CIDEBQ9UHD4 219 aa20.03■□□□□ 0.8
SDC1-205ENST00000447124 ANAPC5Q9UJX4 755 aa20.03■□□□□ 0.8
SDC1-205ENST00000447124 ANAPC2Q9UJX6 822 aa20.03■□□□□ 0.8
SDC1-205ENST00000447124 TTC7AQ9ULT0 858 aaPredicted RBP20.03■□□□□ 0.8
SDC1-205ENST00000447124 SNRNP200O75643 2136 aaKnown RBP20.03■□□□□ 0.8
SDC1-205ENST00000447124 ISM1B1AKI9 464 aa20.02■□□□□ 0.8
SDC1-205ENST00000447124 E7EQ34 232 aa20.02■□□□□ 0.8
SDC1-205ENST00000447124 MKRN2OSH3BPM6 223 aa20.02■□□□□ 0.8
SDC1-205ENST00000447124 MAP3K7O43318 606 aa20.02■□□□□ 0.8
SDC1-205ENST00000447124 RFPL1O75677 317 aa20.02■□□□□ 0.8
SDC1-205ENST00000447124 CBSLP0DN79 551 aa20.02■□□□□ 0.8
SDC1-205ENST00000447124 PKLRP30613 574 aa20.02■□□□□ 0.8
SDC1-205ENST00000447124 CBSP35520 551 aa20.02■□□□□ 0.8
SDC1-205ENST00000447124 PPARGP37231 505 aaPredicted RBP20.02■□□□□ 0.8
SDC1-205ENST00000447124 TERF1P54274 439 aa20.02■□□□□ 0.8
SDC1-205ENST00000447124 CHAF1BQ13112 559 aa20.02■□□□□ 0.8
SDC1-205ENST00000447124 DEFB110Q30KQ9 67 aa20.02■□□□□ 0.8
SDC1-205ENST00000447124 CPZQ66K79 652 aa20.02■□□□□ 0.8
SDC1-205ENST00000447124 C2orf73Q8N5S3 287 aaPredicted RBP20.02■□□□□ 0.8
SDC1-205ENST00000447124 ASZ1Q8WWH4 475 aa20.02■□□□□ 0.8
SDC1-205ENST00000447124 THAP4Q8WY91 577 aa20.02■□□□□ 0.8
SDC1-205ENST00000447124 IL17FQ96PD4 163 aa20.02■□□□□ 0.8
SDC1-205ENST00000447124 TCFL5Q9UL49 500 aa20.02■□□□□ 0.8
SDC1-205ENST00000447124 KLHL20Q9Y2M5 609 aa20.02■□□□□ 0.8
SDC1-205ENST00000447124 A0A0J9YY10 115 aa20.01■□□□□ 0.79
SDC1-205ENST00000447124 F8W8V4 182 aa20.01■□□□□ 0.79
SDC1-205ENST00000447124 AVILO75366 819 aa20.01■□□□□ 0.79
SDC1-205ENST00000447124 APOA4P06727 396 aa20.01■□□□□ 0.79
SDC1-205ENST00000447124 TPSB2P20231 275 aa20.01■□□□□ 0.79
SDC1-205ENST00000447124 TTPAP49638 278 aa20.01■□□□□ 0.79
SDC1-205ENST00000447124 KIR2DS3Q14952 304 aa20.01■□□□□ 0.79
SDC1-205ENST00000447124 TPSAB1Q15661 275 aa20.01■□□□□ 0.79
SDC1-205ENST00000447124 IGFBP7Q16270 282 aa20.01■□□□□ 0.79
SDC1-205ENST00000447124 SLC5A12Q1EHB4 618 aa20.01■□□□□ 0.79
SDC1-205ENST00000447124 AARS2Q5JTZ9 985 aaKnown RBP20.01■□□□□ 0.79
SDC1-205ENST00000447124 PTRHD1Q6GMV3 140 aaKnown RBP20.01■□□□□ 0.79
SDC1-205ENST00000447124 TTC27Q6P3X3 843 aa20.01■□□□□ 0.79
SDC1-205ENST00000447124 HOOK3Q86VS8 718 aa20.01■□□□□ 0.79
SDC1-205ENST00000447124 SEC14L1Q92503 715 aa20.01■□□□□ 0.79
SDC1-205ENST00000447124 ARGFXA6NJG6 315 aa20■□□□□ 0.79
SDC1-205ENST00000447124 GOLGA8KD6RF30 607 aa20■□□□□ 0.79
SDC1-205ENST00000447124 GOLGA8TH3BQL2 631 aa20■□□□□ 0.79
SDC1-205ENST00000447124 NDUFS3O75489 264 aa20■□□□□ 0.79
SDC1-205ENST00000447124 VAPBO95292 243 aa20■□□□□ 0.79
SDC1-205ENST00000447124 RPS3P23396 243 aaKnown RBP eCLIP20■□□□□ 0.797e-11■■■□□ 18.3
SDC1-205ENST00000447124 RAB28P51157 221 aa20■□□□□ 0.79
SDC1-205ENST00000447124 KCNJ11Q14654 390 aa20■□□□□ 0.79
SDC1-205ENST00000447124 CTSL3PQ5NE16 218 aa20■□□□□ 0.79
SDC1-205ENST00000447124 ANKRD22Q5VYY1 191 aa20■□□□□ 0.79
SDC1-205ENST00000447124 ASB18Q6ZVZ8 466 aa20■□□□□ 0.79
SDC1-205ENST00000447124 MPP5Q8N3R9 675 aa20■□□□□ 0.79
SDC1-205ENST00000447124 MS4A14Q96JA4 679 aa20■□□□□ 0.79
SDC1-205ENST00000447124 BIRC8Q96P09 236 aa20■□□□□ 0.79
SDC1-205ENST00000447124 TSSK1BQ9BXA7 367 aa20■□□□□ 0.79
SDC1-205ENST00000447124 MRM3Q9HC36 420 aaKnown RBP20■□□□□ 0.79
SDC1-205ENST00000447124 HOMER3Q9NSC5 361 aa20■□□□□ 0.79
SDC1-205ENST00000447124 SOX13Q9UN79 622 aa20■□□□□ 0.79
SDC1-205ENST00000447124 FER1L5A0AVI2 2057 aa19.99■□□□□ 0.79
SDC1-205ENST00000447124 UBR5O95071 2799 aaPredicted RBP19.99■□□□□ 0.79
SDC1-205ENST00000447124 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP19.99■□□□□ 0.79
SDC1-205ENST00000447124 AP3B1O00203 1094 aa19.99■□□□□ 0.79
SDC1-205ENST00000447124 OR2B3O76000 313 aa19.99■□□□□ 0.79
SDC1-205ENST00000447124 CD9P21926 228 aa19.99■□□□□ 0.79
SDC1-205ENST00000447124 PTGIRP43119 386 aa19.99■□□□□ 0.79
SDC1-205ENST00000447124 MAGEA6P43360 314 aa19.99■□□□□ 0.79
SDC1-205ENST00000447124 VPS41P49754 854 aa19.99■□□□□ 0.79
SDC1-205ENST00000447124 CCL11P51671 97 aa19.99■□□□□ 0.79
SDC1-205ENST00000447124 CDK16Q00536 496 aa19.99■□□□□ 0.79
SDC1-205ENST00000447124 KLRB1Q12918 225 aa19.99■□□□□ 0.79
SDC1-205ENST00000447124 CCSMST1Q4G0I0 132 aa19.99■□□□□ 0.79
SDC1-205ENST00000447124 UNC5DQ6UXZ4 953 aa19.99■□□□□ 0.79
SDC1-205ENST00000447124 CAND1Q86VP6 1230 aaKnown RBP19.99■□□□□ 0.79
SDC1-205ENST00000447124 RASGEF1CQ8N431 466 aa19.99■□□□□ 0.79
SDC1-205ENST00000447124 ZBTB2Q8N680 514 aa19.99■□□□□ 0.79
SDC1-205ENST00000447124 TRIM56Q9BRZ2 755 aaKnown RBP19.99■□□□□ 0.79
SDC1-205ENST00000447124 SLC7A5P2Q9GIP4 190 aa19.99■□□□□ 0.79
SDC1-205ENST00000447124 ING2Q9H160 280 aa19.99■□□□□ 0.79
SDC1-205ENST00000447124 SNX7Q9UNH6 387 aa19.99■□□□□ 0.79
SDC1-205ENST00000447124 NFS1Q9Y697 457 aa19.99■□□□□ 0.79
SDC1-205ENST00000447124 PRICKLE3O43900 615 aaPredicted RBP19.98■□□□□ 0.79
SDC1-205ENST00000447124 KRT14P02533 472 aa19.98■□□□□ 0.79
SDC1-205ENST00000447124 HBQ1P09105 142 aa19.98■□□□□ 0.79
SDC1-205ENST00000447124 FMO4P31512 558 aa19.98■□□□□ 0.79
SDC1-205ENST00000447124 GPS1Q13098 491 aa19.98■□□□□ 0.79
SDC1-205ENST00000447124 NCF4Q15080 339 aa19.98■□□□□ 0.79
SDC1-205ENST00000447124 C1orf189Q5VU69 101 aa19.98■□□□□ 0.79
SDC1-205ENST00000447124 LRRC6Q86X45 466 aa19.98■□□□□ 0.79
SDC1-205ENST00000447124 TMEM151BQ8IW70 566 aa19.98■□□□□ 0.79
SDC1-205ENST00000447124 DCUN1D3Q8IWE4 304 aa19.98■□□□□ 0.79
SDC1-205ENST00000447124 GPR135Q8IZ08 494 aa19.98■□□□□ 0.79
SDC1-205ENST00000447124 ZNF655Q8N720 491 aaPredicted RBP19.98■□□□□ 0.79
SDC1-205ENST00000447124 OR2L8Q8NGY9 312 aa19.98■□□□□ 0.79
SDC1-205ENST00000447124 LPGAT1Q92604 370 aa19.98■□□□□ 0.79
SDC1-205ENST00000447124 N4BP2L2Q92802 583 aaPredicted RBP19.98■□□□□ 0.79
SDC1-205ENST00000447124 GBP5Q96PP8 586 aa19.98■□□□□ 0.79
SDC1-205ENST00000447124 MLXIPLQ9NP71 852 aa19.98■□□□□ 0.79
SDC1-205ENST00000447124 GALPQ9UBC7 116 aa19.98■□□□□ 0.79
SDC1-205ENST00000447124 GNPTGQ9UJJ9 305 aa19.98■□□□□ 0.79
SDC1-205ENST00000447124 PLCL2Q9UPR0 1127 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms