RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 CCL22O00626 93 aa7.73□□□□□ -1.17
SMG1-202ENST00000446231 FHP07954 510 aa7.73□□□□□ -1.17
SMG1-202ENST00000446231 GPC1P35052 558 aa7.73□□□□□ -1.17
SMG1-202ENST00000446231 CLVS2Q5SYC1 327 aa7.73□□□□□ -1.17
SMG1-202ENST00000446231 ZNF730Q6ZMV8 503 aa7.73□□□□□ -1.17
SMG1-202ENST00000446231 IDO2Q6ZQW0 420 aa7.73□□□□□ -1.17
SMG1-202ENST00000446231 TBC1D19Q8N5T2 526 aa7.73□□□□□ -1.17
SMG1-202ENST00000446231 FZD10Q9ULW2 581 aa7.73□□□□□ -1.17
SMG1-202ENST00000446231 SLC12A8A0AV02 714 aa7.73□□□□□ -1.17
SMG1-202ENST00000446231 RRN3P2A6NIE6 340 aa7.73□□□□□ -1.17
SMG1-202ENST00000446231 STK16O75716 305 aa7.73□□□□□ -1.17
SMG1-202ENST00000446231 ARHGEF15O94989 841 aa7.73□□□□□ -1.17
SMG1-202ENST00000446231 KELP23276 732 aa7.73□□□□□ -1.17
SMG1-202ENST00000446231 EPHX2P34913 555 aa7.73□□□□□ -1.17
SMG1-202ENST00000446231 FCRL2Q96LA5 508 aaPredicted RBP7.73□□□□□ -1.17
SMG1-202ENST00000446231 OAS3Q9Y6K5 1087 aaKnown RBP7.73□□□□□ -1.17
SMG1-202ENST00000446231 RORAP35398 523 aa7.73□□□□□ -1.17
SMG1-202ENST00000446231 STK11Q15831 433 aa7.73□□□□□ -1.17
SMG1-202ENST00000446231 ADCK2Q7Z695 626 aa7.73□□□□□ -1.17
SMG1-202ENST00000446231 ZFP42Q96MM3 310 aa7.73□□□□□ -1.17
SMG1-202ENST00000446231 EIF2B4Q9UI10 523 aaKnown RBP7.73□□□□□ -1.17
SMG1-202ENST00000446231 LHCGRP22888 699 aa7.72□□□□□ -1.17
SMG1-202ENST00000446231 TOMM5Q8N4H5 51 aa7.72□□□□□ -1.17
SMG1-202ENST00000446231 ZNF675Q8TD23 568 aa7.72□□□□□ -1.17
SMG1-202ENST00000446231 FUZQ9BT04 418 aa7.72□□□□□ -1.17
SMG1-202ENST00000446231 ENAMQ9NRM1 1142 aa7.72□□□□□ -1.17
SMG1-202ENST00000446231 PITPNAQ00169 270 aa7.72□□□□□ -1.17
SMG1-202ENST00000446231 DUOXA1Q1HG43 343 aa7.72□□□□□ -1.17
SMG1-202ENST00000446231 PIGZQ86VD9 579 aa7.72□□□□□ -1.17
SMG1-202ENST00000446231 LGI2Q8N0V4 545 aa7.72□□□□□ -1.17
SMG1-202ENST00000446231 PTERQ96BW5 349 aa7.72□□□□□ -1.17
SMG1-202ENST00000446231 SHPRHQ149N8 1683 aa7.72□□□□□ -1.17
SMG1-202ENST00000446231 EIF2DP41214 584 aaKnown RBP7.72□□□□□ -1.17
SMG1-202ENST00000446231 TAS2R41P59536 307 aa7.72□□□□□ -1.17
SMG1-202ENST00000446231 NANOGP8Q6NSW7 305 aa7.72□□□□□ -1.17
SMG1-202ENST00000446231 SMARCD1Q96GM5 515 aa7.72□□□□□ -1.17
SMG1-202ENST00000446231 TMEM80Q96HE8 168 aa7.72□□□□□ -1.17
SMG1-202ENST00000446231 SLC25A51Q9H1U9 297 aa7.72□□□□□ -1.17
SMG1-202ENST00000446231 KCNN2Q9H2S1 579 aa7.72□□□□□ -1.17
SMG1-202ENST00000446231 PAICSP22234 425 aaKnown RBP7.72□□□□□ -1.17
SMG1-202ENST00000446231 LAPTM4AQ15012 233 aa7.72□□□□□ -1.17
SMG1-202ENST00000446231 SPOUT1Q5T280 376 aaKnown RBP7.72□□□□□ -1.17
SMG1-202ENST00000446231 ART5Q96L15 291 aa7.72□□□□□ -1.17
SMG1-202ENST00000446231 SEMA3GQ9NS98 782 aa7.72□□□□□ -1.17
SMG1-202ENST00000446231 CSTF2P33240 577 aaKnown RBP eCLIP7.72□□□□□ -1.171e-7■■□□□ 12.1
SMG1-202ENST00000446231 CPSF6Q16630 551 aaKnown RBP eCLIP7.72□□□□□ -1.17
SMG1-202ENST00000446231 PDE12Q6L8Q7 609 aaKnown RBP7.72□□□□□ -1.17
SMG1-202ENST00000446231 ZNF69Q9UC07 566 aa7.72□□□□□ -1.17
SMG1-202ENST00000446231 RPP40O75818 363 aaKnown RBP7.72□□□□□ -1.17
SMG1-202ENST00000446231 ENGP17813 658 aa7.72□□□□□ -1.17
SMG1-202ENST00000446231 CDK5R2Q13319 367 aa7.72□□□□□ -1.17
SMG1-202ENST00000446231 TSTD2Q5T7W7 516 aa7.72□□□□□ -1.17
SMG1-202ENST00000446231 MIB1Q86YT6 1006 aa7.72□□□□□ -1.17
SMG1-202ENST00000446231 NIPAL2Q9H841 368 aa7.72□□□□□ -1.17
SMG1-202ENST00000446231 RNF121Q9H920 327 aa7.72□□□□□ -1.17
SMG1-202ENST00000446231 THUMPD1Q9NXG2 353 aaKnown RBP7.72□□□□□ -1.17
SMG1-202ENST00000446231 AKAP8O43823 692 aaKnown RBP7.72□□□□□ -1.17
SMG1-202ENST00000446231 SLC28A2O43868 658 aa7.72□□□□□ -1.17
SMG1-202ENST00000446231 HCN1O60741 890 aa7.72□□□□□ -1.17
SMG1-202ENST00000446231 CNTN5O94779 1100 aa7.72□□□□□ -1.17
SMG1-202ENST00000446231 RPL35P42766 123 aaKnown RBP7.72□□□□□ -1.17
SMG1-202ENST00000446231 FAM182AQ5T1J6 154 aa7.72□□□□□ -1.17
SMG1-202ENST00000446231 KIAA0930Q6ICG6 404 aaPredicted RBP7.72□□□□□ -1.17
SMG1-202ENST00000446231 OR10Q1Q8NGQ4 319 aa7.72□□□□□ -1.17
SMG1-202ENST00000446231 NUDT4Q9NZJ9 180 aa7.72□□□□□ -1.17
SMG1-202ENST00000446231 OR2AT4A6NND4 320 aa7.72□□□□□ -1.17
SMG1-202ENST00000446231 H3BM21 787 aa7.72□□□□□ -1.17
SMG1-202ENST00000446231 TLR4O00206 839 aa7.72□□□□□ -1.17
SMG1-202ENST00000446231 PIRTP0C851 137 aa7.72□□□□□ -1.17
SMG1-202ENST00000446231 NNMTP40261 264 aa7.72□□□□□ -1.17
SMG1-202ENST00000446231 BPHLQ86WA6 291 aaPredicted RBP7.72□□□□□ -1.17
SMG1-202ENST00000446231 RAVER1Q8IY67 606 aaKnown RBP7.72□□□□□ -1.17
SMG1-202ENST00000446231 MAPK15Q8TD08 544 aa7.72□□□□□ -1.17
SMG1-202ENST00000446231 C3orf14Q9HBI5 128 aa7.72□□□□□ -1.17
SMG1-202ENST00000446231 KLHL28Q9NXS3 571 aa7.72□□□□□ -1.17
SMG1-202ENST00000446231 CAP2P40123 477 aa7.72□□□□□ -1.17
SMG1-202ENST00000446231 MAGEA6P43360 314 aa7.72□□□□□ -1.17
SMG1-202ENST00000446231 NUDT6P53370 316 aa7.72□□□□□ -1.17
SMG1-202ENST00000446231 CNTN2Q02246 1040 aa7.72□□□□□ -1.17
SMG1-202ENST00000446231 VWA5B2Q8N398 1253 aa7.72□□□□□ -1.17
SMG1-202ENST00000446231 MINDY1Q8N5J2 469 aa7.72□□□□□ -1.17
SMG1-202ENST00000446231 HYLS1Q96M11 299 aa7.72□□□□□ -1.17
SMG1-202ENST00000446231 MAPKAP1Q9BPZ7 522 aa7.72□□□□□ -1.17
SMG1-202ENST00000446231 RBCK1Q9BYM8 510 aa7.72□□□□□ -1.17
SMG1-202ENST00000446231 PIGUQ9H490 435 aa7.72□□□□□ -1.17
SMG1-202ENST00000446231 SEC14L2O76054 403 aa7.72□□□□□ -1.17
SMG1-202ENST00000446231 ADORA2AP29274 412 aa7.72□□□□□ -1.17
SMG1-202ENST00000446231 MACC1Q6ZN28 852 aa7.72□□□□□ -1.17
SMG1-202ENST00000446231 SYVN1Q86TM6 617 aa7.72□□□□□ -1.17
SMG1-202ENST00000446231 LGI4Q8N135 537 aa7.72□□□□□ -1.17
SMG1-202ENST00000446231 INO80EQ8NBZ0 244 aaPredicted RBP7.72□□□□□ -1.17
SMG1-202ENST00000446231 CNTN3Q9P232 1028 aa7.72□□□□□ -1.17
SMG1-202ENST00000446231 EEF1E1O43324 174 aaKnown RBP7.72□□□□□ -1.17
SMG1-202ENST00000446231 CREG1O75629 220 aa7.72□□□□□ -1.17
SMG1-202ENST00000446231 ALDH1A2O94788 518 aa7.72□□□□□ -1.17
SMG1-202ENST00000446231 ENDOD1O94919 500 aa7.72□□□□□ -1.17
SMG1-202ENST00000446231 RHBDL3P58872 404 aa7.72□□□□□ -1.17
SMG1-202ENST00000446231 IRF8Q02556 426 aa7.72□□□□□ -1.17
SMG1-202ENST00000446231 KRT78Q8N1N4 520 aa7.72□□□□□ -1.17
SMG1-202ENST00000446231 EBPLQ9BY08 206 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms