RNA–Protein interactions for RNA: ENST00000443016.1

USP6NL-203, Transcript of USP6 N-terminal like, humanhuman

TSL 2

Gene USP6NL, Length 2,491 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-203ENST00000443016 COG4Q9H9E3 785 aa8.52□□□□□ -1.05
USP6NL-203ENST00000443016 FGF21Q9NSA1 209 aa8.52□□□□□ -1.05
USP6NL-203ENST00000443016 GRHL1Q9NZI5 618 aa8.52□□□□□ -1.05
USP6NL-203ENST00000443016 IL17BQ9UHF5 180 aa8.52□□□□□ -1.05
USP6NL-203ENST00000443016 PRRC2CQ9Y520 2896 aaKnown RBP8.52□□□□□ -1.05
USP6NL-203ENST00000443016 HEATR9A2RTY3 570 aa8.52□□□□□ -1.05
USP6NL-203ENST00000443016 GSAPA4D1B5 854 aa8.52□□□□□ -1.05
USP6NL-203ENST00000443016 BHMG1C9JSJ3 638 aaPredicted RBP8.52□□□□□ -1.05
USP6NL-203ENST00000443016 J3QKU1 62 aa8.52□□□□□ -1.05
USP6NL-203ENST00000443016 SGTAO43765 313 aa8.52□□□□□ -1.05
USP6NL-203ENST00000443016 SPAG6O75602 509 aa8.52□□□□□ -1.05
USP6NL-203ENST00000443016 POLR2CP19387 275 aaPredicted RBP8.52□□□□□ -1.05
USP6NL-203ENST00000443016 CDH3P22223 829 aa8.52□□□□□ -1.05
USP6NL-203ENST00000443016 IVDP26440 423 aa8.52□□□□□ -1.05
USP6NL-203ENST00000443016 DLSTP36957 453 aa8.52□□□□□ -1.05
USP6NL-203ENST00000443016 STAT5AP42229 794 aa8.52□□□□□ -1.05
USP6NL-203ENST00000443016 NSG1P42857 185 aa8.52□□□□□ -1.05
USP6NL-203ENST00000443016 VSNL1P62760 191 aa8.52□□□□□ -1.05
USP6NL-203ENST00000443016 HSD11B2P80365 405 aa8.52□□□□□ -1.05
USP6NL-203ENST00000443016 LAMB3Q13751 1172 aa8.52□□□□□ -1.05
USP6NL-203ENST00000443016 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.52□□□□□ -1.05
USP6NL-203ENST00000443016 DNAJC21Q5F1R6 531 aaKnown RBP8.52□□□□□ -1.05
USP6NL-203ENST00000443016 TMTC4Q5T4D3 741 aa8.52□□□□□ -1.05
USP6NL-203ENST00000443016 KLHDC8BQ8IXV7 354 aa8.52□□□□□ -1.05
USP6NL-203ENST00000443016 PIANPQ8IYJ0 282 aa8.52□□□□□ -1.05
USP6NL-203ENST00000443016 PDIK1LQ8N165 341 aa8.52□□□□□ -1.05
USP6NL-203ENST00000443016 ACVR1CQ8NER5 493 aa8.52□□□□□ -1.05
USP6NL-203ENST00000443016 OR6P1Q8NGX9 317 aa8.52□□□□□ -1.05
USP6NL-203ENST00000443016 RMDN2Q96LZ7 410 aa8.52□□□□□ -1.05
USP6NL-203ENST00000443016 PHACTR1Q9C0D0 580 aa8.52□□□□□ -1.05
USP6NL-203ENST00000443016 RAB21Q9UL25 225 aa8.52□□□□□ -1.05
USP6NL-203ENST00000443016 PADI1Q9ULC6 663 aa8.52□□□□□ -1.05
USP6NL-203ENST00000443016 NFU1Q9UMS0 254 aa8.52□□□□□ -1.05
USP6NL-203ENST00000443016 COL12A1Q99715 3063 aa8.51□□□□□ -1.05
USP6NL-203ENST00000443016 CCDC151A5D8V7 595 aa8.51□□□□□ -1.05
USP6NL-203ENST00000443016 QSOX1O00391 747 aa8.51□□□□□ -1.05
USP6NL-203ENST00000443016 ZBTB11O95625 1053 aaPredicted RBP8.51□□□□□ -1.05
USP6NL-203ENST00000443016 DLGAP3O95886 979 aa8.51□□□□□ -1.05
USP6NL-203ENST00000443016 MT-ND3P03897 115 aa8.51□□□□□ -1.05
USP6NL-203ENST00000443016 EBLN1P0CF75 366 aa8.51□□□□□ -1.05
USP6NL-203ENST00000443016 FGF5P12034 268 aa8.51□□□□□ -1.05
USP6NL-203ENST00000443016 FOLR1P15328 257 aa8.51□□□□□ -1.05
USP6NL-203ENST00000443016 PREPP48147 710 aa8.51□□□□□ -1.05
USP6NL-203ENST00000443016 CARSP49589 748 aaKnown RBP8.51□□□□□ -1.05
USP6NL-203ENST00000443016 PRAMEP78395 509 aa8.51□□□□□ -1.05
USP6NL-203ENST00000443016 PRKG2Q13237 762 aa8.51□□□□□ -1.05
USP6NL-203ENST00000443016 DBN1Q16643 649 aa8.51□□□□□ -1.05
USP6NL-203ENST00000443016 HIF1AQ16665 826 aa8.51□□□□□ -1.05
USP6NL-203ENST00000443016 CAPRIN2Q6IMN6 1127 aaKnown RBP8.51□□□□□ -1.05
USP6NL-203ENST00000443016 C16orf54Q6UWD8 224 aa8.51□□□□□ -1.05
USP6NL-203ENST00000443016 CENPUQ71F23 418 aa8.51□□□□□ -1.05
USP6NL-203ENST00000443016 KMT5CQ86Y97 462 aa8.51□□□□□ -1.05
USP6NL-203ENST00000443016 NAT8LQ8N9F0 302 aa8.51□□□□□ -1.05
USP6NL-203ENST00000443016 MCUQ8NE86 351 aa8.51□□□□□ -1.05
USP6NL-203ENST00000443016 FBXO25Q8TCJ0 367 aa8.51□□□□□ -1.05
USP6NL-203ENST00000443016 SLC41A2Q96JW4 573 aa8.51□□□□□ -1.05
USP6NL-203ENST00000443016 KCND3Q9UK17 655 aa8.51□□□□□ -1.05
USP6NL-203ENST00000443016 CROTQ9UKG9 612 aa8.51□□□□□ -1.05
USP6NL-203ENST00000443016 ASH1LQ9NR48 2969 aaKnown RBP8.51□□□□□ -1.05
USP6NL-203ENST00000443016 IGLV3-16A0A075B6K0 115 aa8.51□□□□□ -1.05
USP6NL-203ENST00000443016 TRBV5-4A0A0C4DH59 114 aa8.51□□□□□ -1.05
USP6NL-203ENST00000443016 MROH6A6NGR9 719 aa8.51□□□□□ -1.05
USP6NL-203ENST00000443016 OR51F1A6NGY5 319 aa8.51□□□□□ -1.05
USP6NL-203ENST00000443016 MATN2O00339 956 aa8.51□□□□□ -1.05
USP6NL-203ENST00000443016 SUN1O94901 812 aa8.51□□□□□ -1.05
USP6NL-203ENST00000443016 FTH1P02794 183 aa8.51□□□□□ -1.05
USP6NL-203ENST00000443016 NTRK1P04629 796 aa8.51□□□□□ -1.05
USP6NL-203ENST00000443016 MLNP12872 115 aa8.51□□□□□ -1.05
USP6NL-203ENST00000443016 VARSP26640 1264 aaKnown RBP8.51□□□□□ -1.05
USP6NL-203ENST00000443016 PDHA2P29803 388 aa8.51□□□□□ -1.05
USP6NL-203ENST00000443016 POLE2P56282 527 aa8.51□□□□□ -1.05
USP6NL-203ENST00000443016 CDC20Q12834 499 aa8.51□□□□□ -1.05
USP6NL-203ENST00000443016 RPA4Q13156 261 aa8.51□□□□□ -1.05
USP6NL-203ENST00000443016 BOP1Q14137 746 aaKnown RBP8.51□□□□□ -1.05
USP6NL-203ENST00000443016 MAP7Q14244 749 aa8.51□□□□□ -1.05
USP6NL-203ENST00000443016 SYTL3Q4VX76 610 aa8.51□□□□□ -1.05
USP6NL-203ENST00000443016 PWWP2BQ6NUJ5 590 aa8.51□□□□□ -1.05
USP6NL-203ENST00000443016 EMBQ6PCB8 327 aa8.51□□□□□ -1.05
USP6NL-203ENST00000443016 MICALCLQ6ZW33 695 aa8.51□□□□□ -1.05
USP6NL-203ENST00000443016 BPHLQ86WA6 291 aaPredicted RBP8.51□□□□□ -1.05
USP6NL-203ENST00000443016 TMEM126BQ8IUX1 230 aa8.51□□□□□ -1.05
USP6NL-203ENST00000443016 PHC3Q8NDX5 983 aa8.51□□□□□ -1.05
USP6NL-203ENST00000443016 ELMO1Q92556 727 aa8.51□□□□□ -1.05
USP6NL-203ENST00000443016 TFGQ92734 400 aaPredicted RBP8.51□□□□□ -1.05
USP6NL-203ENST00000443016 HDAC10Q969S8 669 aa8.51□□□□□ -1.05
USP6NL-203ENST00000443016 HGH1Q9BTY7 390 aa8.51□□□□□ -1.05
USP6NL-203ENST00000443016 SLC25A18Q9H1K4 315 aa8.51□□□□□ -1.05
USP6NL-203ENST00000443016 FANCEQ9HB96 536 aa8.51□□□□□ -1.05
USP6NL-203ENST00000443016 ASF1AQ9Y294 204 aa8.51□□□□□ -1.05
USP6NL-203ENST00000443016 CCDC162PA2VCL2 907 aa8.5□□□□□ -1.05
USP6NL-203ENST00000443016 F8W8V4 182 aa8.5□□□□□ -1.05
USP6NL-203ENST00000443016 EIF3HO15372 352 aaKnown RBP eCLIP8.5□□□□□ -1.05
USP6NL-203ENST00000443016 TMEM63AO94886 807 aa8.5□□□□□ -1.05
USP6NL-203ENST00000443016 AP2A2O94973 939 aa8.5□□□□□ -1.05
USP6NL-203ENST00000443016 PGRP06401 933 aa8.5□□□□□ -1.05
USP6NL-203ENST00000443016 OR56A5P0C7T3 313 aa8.5□□□□□ -1.05
USP6NL-203ENST00000443016 ADRA1DP25100 572 aa8.5□□□□□ -1.05
USP6NL-203ENST00000443016 PPARGP37231 505 aaPredicted RBP8.5□□□□□ -1.05
USP6NL-203ENST00000443016 GRIA1P42261 906 aa8.5□□□□□ -1.05
USP6NL-203ENST00000443016 ERV3-1Q14264 604 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms