RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 PLAC1Q9HBJ0 212 aa22.88■■□□□ 1.25
VARS-217ENST00000440048 CIDEBQ9UHD4 219 aa22.88■■□□□ 1.25
VARS-217ENST00000440048 CHMP2BQ9UQN3 213 aa22.88■■□□□ 1.25
VARS-217ENST00000440048 RUVBL2Q9Y230 463 aaKnown RBP22.88■■□□□ 1.25
VARS-217ENST00000440048 FAM187AA6NFU0 413 aa22.87■■□□□ 1.25
VARS-217ENST00000440048 ATXN7O15265 892 aaPredicted RBP22.87■■□□□ 1.25
VARS-217ENST00000440048 KIAA0754O94854 1291 aa22.87■■□□□ 1.25
VARS-217ENST00000440048 HAUS5O94927 633 aa22.87■■□□□ 1.25
VARS-217ENST00000440048 TIAF1O95411 115 aa22.87■■□□□ 1.25
VARS-217ENST00000440048 PVRP15151 417 aa22.87■■□□□ 1.25
VARS-217ENST00000440048 UGT2B7P16662 529 aa22.87■■□□□ 1.25
VARS-217ENST00000440048 ATP5DP30049 168 aa22.87■■□□□ 1.25
VARS-217ENST00000440048 RAB28P51157 221 aa22.87■■□□□ 1.25
VARS-217ENST00000440048 CLCN7P51798 805 aa22.87■■□□□ 1.25
VARS-217ENST00000440048 ARL4CP56559 192 aa22.87■■□□□ 1.25
VARS-217ENST00000440048 TUBB4BP68371 445 aa22.87■■□□□ 1.25
VARS-217ENST00000440048 RHDQ02161 417 aa22.87■■□□□ 1.25
VARS-217ENST00000440048 TUBB2AQ13885 445 aa22.87■■□□□ 1.25
VARS-217ENST00000440048 MAP7Q14244 749 aa22.87■■□□□ 1.25
VARS-217ENST00000440048 GPR19Q15760 415 aa22.87■■□□□ 1.25
VARS-217ENST00000440048 CNSTQ6PJW8 725 aa22.87■■□□□ 1.25
VARS-217ENST00000440048 BPHLQ86WA6 291 aaPredicted RBP22.87■■□□□ 1.25
VARS-217ENST00000440048 FLVCR1-AS1Q8TAF5 88 aa22.87■■□□□ 1.25
VARS-217ENST00000440048 LRRC39Q96DD0 335 aa22.87■■□□□ 1.25
VARS-217ENST00000440048 CFAP36Q96G28 342 aa22.87■■□□□ 1.25
VARS-217ENST00000440048 WDR83Q9BRX9 315 aaKnown RBP22.87■■□□□ 1.25
VARS-217ENST00000440048 TUBB2BQ9BVA1 445 aa22.87■■□□□ 1.25
VARS-217ENST00000440048 KLHL25Q9H0H3 589 aa22.87■■□□□ 1.25
VARS-217ENST00000440048 CCDC68Q9H2F9 335 aa22.87■■□□□ 1.25
VARS-217ENST00000440048 TSR3Q9UJK0 312 aaKnown RBP22.87■■□□□ 1.25
VARS-217ENST00000440048 TEX264Q9Y6I9 313 aa22.87■■□□□ 1.25
VARS-217ENST00000440048 PIEZO2Q9H5I5 2752 aa22.86■■□□□ 1.25
VARS-217ENST00000440048 RAD51CO43502 376 aa22.86■■□□□ 1.25
VARS-217ENST00000440048 C1orf105O95561 183 aa22.86■■□□□ 1.25
VARS-217ENST00000440048 LIFP15018 202 aa22.86■■□□□ 1.25
VARS-217ENST00000440048 PEBP1P30086 187 aaKnown RBP22.86■■□□□ 1.25
VARS-217ENST00000440048 BDKRB1P46663 353 aa22.86■■□□□ 1.25
VARS-217ENST00000440048 ACSBG2Q5FVE4 666 aa22.86■■□□□ 1.25
VARS-217ENST00000440048 PWWP2BQ6NUJ5 590 aa22.86■■□□□ 1.25
VARS-217ENST00000440048 MAATS1Q7Z4T9 603 aa22.86■■□□□ 1.25
VARS-217ENST00000440048 TRIM73Q86UV7 250 aa22.86■■□□□ 1.25
VARS-217ENST00000440048 LINC01555Q8NAE3 123 aa22.86■■□□□ 1.25
VARS-217ENST00000440048 C2CD4AQ8NCU7 369 aaPredicted RBP22.86■■□□□ 1.25
VARS-217ENST00000440048 ZNF501Q96CX3 271 aaPredicted RBP22.86■■□□□ 1.25
VARS-217ENST00000440048 FOPNLQ96NB1 174 aa22.86■■□□□ 1.25
VARS-217ENST00000440048 IL17FQ96PD4 163 aa22.86■■□□□ 1.25
VARS-217ENST00000440048 BBC3Q96PG8 261 aaPredicted RBP22.86■■□□□ 1.25
VARS-217ENST00000440048 FCRL4Q96PJ5 515 aa22.86■■□□□ 1.25
VARS-217ENST00000440048 SLC30A3Q99726 388 aa22.86■■□□□ 1.25
VARS-217ENST00000440048 ERP44Q9BS26 406 aa22.86■■□□□ 1.25
VARS-217ENST00000440048 ZC3H7BQ9UGR2 993 aaKnown RBP22.86■■□□□ 1.25
VARS-217ENST00000440048 LNPEPQ9UIQ6 1025 aa22.86■■□□□ 1.25
VARS-217ENST00000440048 MED16Q9Y2X0 877 aa22.86■■□□□ 1.25
VARS-217ENST00000440048 PCDHGA4Q9Y5G9 962 aa22.86■■□□□ 1.25
VARS-217ENST00000440048 LOC101059948A0A1B0GTJ6 334 aa22.85■■□□□ 1.25
VARS-217ENST00000440048 ISM1B1AKI9 464 aa22.85■■□□□ 1.25
VARS-217ENST00000440048 MATN4O95460 622 aa22.85■■□□□ 1.25
VARS-217ENST00000440048 ABHD18Q0P651 414 aa22.85■■□□□ 1.25
VARS-217ENST00000440048 KIR2DS3Q14952 304 aa22.85■■□□□ 1.25
VARS-217ENST00000440048 CCSMST1Q4G0I0 132 aa22.85■■□□□ 1.25
VARS-217ENST00000440048 TTC23LQ6PF05 361 aa22.85■■□□□ 1.25
VARS-217ENST00000440048 C6orf15Q6UXA7 325 aaPredicted RBP22.85■■□□□ 1.25
VARS-217ENST00000440048 ESX1Q8N693 406 aa22.85■■□□□ 1.25
VARS-217ENST00000440048 LMNTD1Q8N9Z9 388 aa22.85■■□□□ 1.25
VARS-217ENST00000440048 GALNT6Q8NCL4 622 aa22.85■■□□□ 1.25
VARS-217ENST00000440048 GIMAP7Q8NHV1 300 aa22.85■■□□□ 1.25
VARS-217ENST00000440048 GABPB2Q8TAK5 448 aaPredicted RBP22.85■■□□□ 1.25
VARS-217ENST00000440048 KCNJ9Q92806 393 aa22.85■■□□□ 1.25
VARS-217ENST00000440048 RAD51AP1Q96B01 352 aa22.85■■□□□ 1.25
VARS-217ENST00000440048 CERS2Q96G23 380 aa22.85■■□□□ 1.25
VARS-217ENST00000440048 C16orf45Q96MC5 204 aaPredicted RBP22.85■■□□□ 1.25
VARS-217ENST00000440048 KLHL42Q9P2K6 505 aa22.85■■□□□ 1.25
VARS-217ENST00000440048 MRFAP1Q9Y605 127 aa22.85■■□□□ 1.25
VARS-217ENST00000440048 COMMD10Q9Y6G5 202 aa22.85■■□□□ 1.25
VARS-217ENST00000440048 ERVH48-1M5A8F1 160 aa22.84■■□□□ 1.25
VARS-217ENST00000440048 NDC80O14777 642 aa22.84■■□□□ 1.25
VARS-217ENST00000440048 RASGRF2O14827 1237 aa22.84■■□□□ 1.25
VARS-217ENST00000440048 CD9P21926 228 aa22.84■■□□□ 1.25
VARS-217ENST00000440048 KLHL38Q2WGJ6 581 aa22.84■■□□□ 1.25
VARS-217ENST00000440048 KIAA1614Q5VZ46 1190 aa22.84■■□□□ 1.25
VARS-217ENST00000440048 STEAP4Q687X5 459 aa22.84■■□□□ 1.25
VARS-217ENST00000440048 ANKMY2Q8IV38 441 aa22.84■■□□□ 1.25
VARS-217ENST00000440048 SPNS2Q8IVW8 549 aa22.84■■□□□ 1.25
VARS-217ENST00000440048 CNTN4Q8IWV2 1026 aa22.84■■□□□ 1.25
VARS-217ENST00000440048 C2orf73Q8N5S3 287 aaPredicted RBP22.84■■□□□ 1.25
VARS-217ENST00000440048 BBOF1Q8ND07 529 aa22.84■■□□□ 1.25
VARS-217ENST00000440048 OR2L8Q8NGY9 312 aa22.84■■□□□ 1.25
VARS-217ENST00000440048 OR8K5Q8NH50 307 aa22.84■■□□□ 1.25
VARS-217ENST00000440048 WBP1Q96G27 269 aa22.84■■□□□ 1.25
VARS-217ENST00000440048 AARSD1Q9BTE6 412 aaKnown RBP22.84■■□□□ 1.25
VARS-217ENST00000440048 DPH5Q9H2P9 285 aa22.84■■□□□ 1.25
VARS-217ENST00000440048 SLC39A10Q9ULF5 831 aa22.84■■□□□ 1.25
VARS-217ENST00000440048 COL6A6A6NMZ7 2263 aa22.84■■□□□ 1.25
VARS-217ENST00000440048 CFAP46Q8IYW2 2715 aa22.84■■□□□ 1.25
VARS-217ENST00000440048 A0A0J9YY10 115 aa22.83■■□□□ 1.25
VARS-217ENST00000440048 KRT87PA6NCN2 255 aa22.83■■□□□ 1.25
VARS-217ENST00000440048 MAP3K7O43318 606 aa22.83■■□□□ 1.25
VARS-217ENST00000440048 GABRB3P28472 473 aa22.83■■□□□ 1.25
VARS-217ENST00000440048 CCNFP41002 786 aa22.83■■□□□ 1.25
VARS-217ENST00000440048 STAT5AP42229 794 aa22.83■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms