RNA–Protein interactions for RNA: ENST00000439724.7

SMAD3-202, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-202ENST00000439724 SNX6Q9UNH7 406 aa11.48□□□□□ -0.57
SMAD3-202ENST00000439724 LRCH1Q9Y2L9 728 aa11.48□□□□□ -0.57
SMAD3-202ENST00000439724 PCDHA9Q9Y5H5 950 aa11.48□□□□□ -0.57
SMAD3-202ENST00000439724 STON1Q9Y6Q2 735 aa11.48□□□□□ -0.57
SMAD3-202ENST00000439724 C15orf38-AP3S2A0A0A6YYH1 394 aa11.47□□□□□ -0.57
SMAD3-202ENST00000439724 K7ESM1 405 aa11.47□□□□□ -0.57
SMAD3-202ENST00000439724 NPC1O15118 1278 aa11.47□□□□□ -0.57
SMAD3-202ENST00000439724 AP1G1O43747 822 aa11.47□□□□□ -0.57
SMAD3-202ENST00000439724 VEGFDO43915 354 aa11.47□□□□□ -0.57
SMAD3-202ENST00000439724 PEX1O43933 1283 aa11.47□□□□□ -0.57
SMAD3-202ENST00000439724 PCSK2P16519 638 aa11.47□□□□□ -0.57
SMAD3-202ENST00000439724 GDI1P31150 447 aa11.47□□□□□ -0.57
SMAD3-202ENST00000439724 PREPP48147 710 aa11.47□□□□□ -0.57
SMAD3-202ENST00000439724 HMGCS1Q01581 520 aa11.47□□□□□ -0.57
SMAD3-202ENST00000439724 PCDH1Q08174 1060 aa11.47□□□□□ -0.57
SMAD3-202ENST00000439724 CNTN1Q12860 1018 aa11.47□□□□□ -0.57
SMAD3-202ENST00000439724 ABRQ12979 859 aa11.47□□□□□ -0.57
SMAD3-202ENST00000439724 BNIP2Q12982 314 aa11.47□□□□□ -0.57
SMAD3-202ENST00000439724 ADAM15Q13444 863 aa11.47□□□□□ -0.57
SMAD3-202ENST00000439724 CAMK2GQ13555 558 aaPredicted RBP11.47□□□□□ -0.57
SMAD3-202ENST00000439724 GTF2H3Q13889 308 aa11.47□□□□□ -0.57
SMAD3-202ENST00000439724 IMPG1Q17R60 797 aa11.47□□□□□ -0.57
SMAD3-202ENST00000439724 TIGD2Q4W5G0 525 aa11.47□□□□□ -0.57
SMAD3-202ENST00000439724 PAGE3Q5JUK9 113 aa11.47□□□□□ -0.57
SMAD3-202ENST00000439724 IRAK1BP1Q5VVH5 260 aa11.47□□□□□ -0.57
SMAD3-202ENST00000439724 CES5AQ6NT32 575 aa11.47□□□□□ -0.57
SMAD3-202ENST00000439724 PARM1Q6UWI2 310 aa11.47□□□□□ -0.57
SMAD3-202ENST00000439724 IZUMO2Q6UXV1 221 aa11.47□□□□□ -0.57
SMAD3-202ENST00000439724 ARPINQ7Z6K5 226 aa11.47□□□□□ -0.57
SMAD3-202ENST00000439724 SPATA24Q86W54 205 aa11.47□□□□□ -0.57
SMAD3-202ENST00000439724 VPS33AQ96AX1 596 aa11.47□□□□□ -0.57
SMAD3-202ENST00000439724 LRCH3Q96II8 777 aa11.47□□□□□ -0.57
SMAD3-202ENST00000439724 FOPNLQ96NB1 174 aa11.47□□□□□ -0.57
SMAD3-202ENST00000439724 ECSITQ9BQ95 431 aa11.47□□□□□ -0.57
SMAD3-202ENST00000439724 ACPTQ9BZG2 426 aa11.47□□□□□ -0.57
SMAD3-202ENST00000439724 RSPH9Q9H1X1 276 aaPredicted RBP11.47□□□□□ -0.57
SMAD3-202ENST00000439724 S1PR5Q9H228 398 aa11.47□□□□□ -0.57
SMAD3-202ENST00000439724 MUC13Q9H3R2 512 aa11.47□□□□□ -0.57
SMAD3-202ENST00000439724 IL1RL2Q9HB29 575 aa11.47□□□□□ -0.57
SMAD3-202ENST00000439724 C1orf109Q9NX04 203 aa11.47□□□□□ -0.57
SMAD3-202ENST00000439724 CMTM6Q9NX76 183 aa11.47□□□□□ -0.57
SMAD3-202ENST00000439724 STOX2Q9P2F5 926 aaPredicted RBP11.47□□□□□ -0.57
SMAD3-202ENST00000439724 GULP1Q9UBP9 304 aa11.47□□□□□ -0.57
SMAD3-202ENST00000439724 SLC22A14Q9Y267 594 aa11.47□□□□□ -0.57
SMAD3-202ENST00000439724 C17orf113A0A1B0GUU1 675 aa11.46□□□□□ -0.57
SMAD3-202ENST00000439724 TCRBV3S1A0A5B6 114 aa11.46□□□□□ -0.57
SMAD3-202ENST00000439724 ANTXRLA6NF34 631 aa11.46□□□□□ -0.57
SMAD3-202ENST00000439724 H3BM21 787 aa11.46□□□□□ -0.57
SMAD3-202ENST00000439724 PRAMEF4O60810 478 aa11.46□□□□□ -0.57
SMAD3-202ENST00000439724 STAMBPO95630 424 aa11.46□□□□□ -0.57
SMAD3-202ENST00000439724 PDYNP01213 254 aa11.46□□□□□ -0.57
SMAD3-202ENST00000439724 JUPP14923 745 aa11.46□□□□□ -0.57
SMAD3-202ENST00000439724 VARSP26640 1264 aaKnown RBP11.46□□□□□ -0.57
SMAD3-202ENST00000439724 PBLDP30039 288 aaPredicted RBP11.46□□□□□ -0.57
SMAD3-202ENST00000439724 DRD3P35462 400 aa11.46□□□□□ -0.57
SMAD3-202ENST00000439724 BDKRB1P46663 353 aa11.46□□□□□ -0.57
SMAD3-202ENST00000439724 RHDQ02161 417 aa11.46□□□□□ -0.57
SMAD3-202ENST00000439724 PLOD1Q02809 727 aaPredicted RBP11.46□□□□□ -0.57
SMAD3-202ENST00000439724 ADGRE1Q14246 886 aa11.46□□□□□ -0.57
SMAD3-202ENST00000439724 KIAA0040Q15053 153 aa11.46□□□□□ -0.57
SMAD3-202ENST00000439724 CPSF6Q16630 551 aaKnown RBP eCLIP11.46□□□□□ -0.57
SMAD3-202ENST00000439724 SGO1Q5FBB7 561 aa11.46□□□□□ -0.57
SMAD3-202ENST00000439724 OGFRL1Q5TC84 451 aaPredicted RBP11.46□□□□□ -0.57
SMAD3-202ENST00000439724 CACHD1Q5VU97 1274 aa11.46□□□□□ -0.57
SMAD3-202ENST00000439724 PRAMEF9Q5VWM5 478 aa11.46□□□□□ -0.57
SMAD3-202ENST00000439724 LIPJQ5W064 366 aa11.46□□□□□ -0.57
SMAD3-202ENST00000439724 AGTRAPQ6RW13 159 aa11.46□□□□□ -0.57
SMAD3-202ENST00000439724 ADAMTSL4Q6UY14 1074 aa11.46□□□□□ -0.57
SMAD3-202ENST00000439724 TRIM74Q86UV6 250 aa11.46□□□□□ -0.57
SMAD3-202ENST00000439724 LILRA3Q8N6C8 439 aaPredicted RBP11.46□□□□□ -0.57
SMAD3-202ENST00000439724 GLB1L3Q8NCI6 653 aaPredicted RBP11.46□□□□□ -0.57
SMAD3-202ENST00000439724 OR56A3Q8NH54 315 aa11.46□□□□□ -0.57
SMAD3-202ENST00000439724 SELENOMQ8WWX9 145 aa11.46□□□□□ -0.57
SMAD3-202ENST00000439724 FGF14Q92915 247 aa11.46□□□□□ -0.57
SMAD3-202ENST00000439724 ZUFSPQ96AP4 578 aa11.46□□□□□ -0.57
SMAD3-202ENST00000439724 TMEM125Q96AQ2 219 aa11.46□□□□□ -0.57
SMAD3-202ENST00000439724 PYCR2Q96C36 320 aa11.46□□□□□ -0.57
SMAD3-202ENST00000439724 ZBTB18Q99592 522 aa11.46□□□□□ -0.57
SMAD3-202ENST00000439724 GDF15Q99988 308 aa11.46□□□□□ -0.57
SMAD3-202ENST00000439724 TRMT61BQ9BVS5 477 aaKnown RBP11.46□□□□□ -0.57
SMAD3-202ENST00000439724 KLHL4Q9C0H6 718 aa11.46□□□□□ -0.57
SMAD3-202ENST00000439724 ATG10Q9H0Y0 220 aa11.46□□□□□ -0.57
SMAD3-202ENST00000439724 PCDHAC1Q9H158 963 aa11.46□□□□□ -0.57
SMAD3-202ENST00000439724 OR2AG1Q9H205 316 aa11.46□□□□□ -0.57
SMAD3-202ENST00000439724 ELOVL6Q9H5J4 265 aa11.46□□□□□ -0.57
SMAD3-202ENST00000439724 CLEC1BQ9P126 229 aa11.46□□□□□ -0.57
SMAD3-202ENST00000439724 ATXN10Q9UBB4 475 aa11.46□□□□□ -0.57
SMAD3-202ENST00000439724 FAM8A1Q9UBU6 413 aa11.46□□□□□ -0.57
SMAD3-202ENST00000439724 RIMS3Q9UJD0 308 aa11.46□□□□□ -0.57
SMAD3-202ENST00000439724 GPR34Q9UPC5 381 aa11.46□□□□□ -0.57
SMAD3-202ENST00000439724 KRT87PA6NCN2 255 aa11.45□□□□□ -0.58
SMAD3-202ENST00000439724 SEC22BO75396 215 aa11.45□□□□□ -0.58
SMAD3-202ENST00000439724 ADH1BP00325 375 aa11.45□□□□□ -0.58
SMAD3-202ENST00000439724 ACPPP15309 386 aa11.45□□□□□ -0.58
SMAD3-202ENST00000439724 ITPKAP23677 461 aa11.45□□□□□ -0.58
SMAD3-202ENST00000439724 PEX2P28328 305 aa11.45□□□□□ -0.58
SMAD3-202ENST00000439724 PDHA2P29803 388 aa11.45□□□□□ -0.58
SMAD3-202ENST00000439724 EEFSECP57772 596 aaKnown RBP11.45□□□□□ -0.58
SMAD3-202ENST00000439724 CHIT1Q13231 466 aa11.45□□□□□ -0.58
SMAD3-202ENST00000439724 CAPRIN1Q14444 709 aaKnown RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms