RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 ZPBPQ9BS86 351 aa11.45□□□□□ -0.58
HSPG2-206ENST00000439717 MCMBPQ9BTE3 642 aa11.45□□□□□ -0.58
HSPG2-206ENST00000439717 MENTQ9BUN1 341 aa11.45□□□□□ -0.58
HSPG2-206ENST00000439717 ASPSCR1Q9BZE9 553 aa11.45□□□□□ -0.58
HSPG2-206ENST00000439717 RHOJQ9H4E5 214 aa11.45□□□□□ -0.58
HSPG2-206ENST00000439717 SMYD2Q9NRG4 433 aa11.45□□□□□ -0.58
HSPG2-206ENST00000439717 OCIAD1Q9NX40 245 aa11.45□□□□□ -0.58
HSPG2-206ENST00000439717 SIDT1Q9NXL6 827 aaKnown RBP11.45□□□□□ -0.58
HSPG2-206ENST00000439717 SLC39A1Q9NY26 324 aa11.45□□□□□ -0.58
HSPG2-206ENST00000439717 ACTR10Q9NZ32 417 aa11.45□□□□□ -0.58
HSPG2-206ENST00000439717 TXNDC16Q9P2K2 825 aa11.45□□□□□ -0.58
HSPG2-206ENST00000439717 ACSL6Q9UKU0 697 aa11.45□□□□□ -0.58
HSPG2-206ENST00000439717 SLC39A10Q9ULF5 831 aa11.45□□□□□ -0.58
HSPG2-206ENST00000439717 ZMIZ1Q9ULJ6 1067 aa11.45□□□□□ -0.58
HSPG2-206ENST00000439717 PSAT1Q9Y617 370 aa11.45□□□□□ -0.58
HSPG2-206ENST00000439717 NFS1Q9Y697 457 aa11.45□□□□□ -0.58
HSPG2-206ENST00000439717 FREM2Q5SZK8 3169 aa11.44□□□□□ -0.58
HSPG2-206ENST00000439717 IGHV5-51A0A0C4DH38 117 aa11.44□□□□□ -0.58
HSPG2-206ENST00000439717 CXorf49A8MYA2 514 aaPredicted RBP11.44□□□□□ -0.58
HSPG2-206ENST00000439717 C9orf172C9J069 976 aa11.44□□□□□ -0.58
HSPG2-206ENST00000439717 GFYI3L273 518 aa11.44□□□□□ -0.58
HSPG2-206ENST00000439717 AGRPO00253 132 aa11.44□□□□□ -0.58
HSPG2-206ENST00000439717 TLX3O43711 291 aaPredicted RBP11.44□□□□□ -0.58
HSPG2-206ENST00000439717 ZBTB11O95625 1053 aaPredicted RBP11.44□□□□□ -0.58
HSPG2-206ENST00000439717 C1QAP02745 245 aa11.44□□□□□ -0.58
HSPG2-206ENST00000439717 MCM3P25205 808 aa11.44□□□□□ -0.58
HSPG2-206ENST00000439717 ECHS1P30084 290 aa11.44□□□□□ -0.58
HSPG2-206ENST00000439717 SLC5A2P31639 672 aa11.44□□□□□ -0.58
HSPG2-206ENST00000439717 PHBP35232 272 aa11.44□□□□□ -0.58
HSPG2-206ENST00000439717 HSD17B2P37059 387 aa11.44□□□□□ -0.58
HSPG2-206ENST00000439717 GP5P40197 560 aa11.44□□□□□ -0.58
HSPG2-206ENST00000439717 ABCG1P45844 678 aa11.44□□□□□ -0.58
HSPG2-206ENST00000439717 ARL4DP49703 201 aa11.44□□□□□ -0.58
HSPG2-206ENST00000439717 IL2P60568 153 aa11.44□□□□□ -0.58
HSPG2-206ENST00000439717 HSD11B2P80365 405 aa11.44□□□□□ -0.58
HSPG2-206ENST00000439717 PDAP1Q13442 181 aaKnown RBP11.44□□□□□ -0.58
HSPG2-206ENST00000439717 IL11RAQ14626 422 aa11.44□□□□□ -0.58
HSPG2-206ENST00000439717 ST3GAL2Q16842 350 aa11.44□□□□□ -0.58
HSPG2-206ENST00000439717 PAQR3Q6TCH7 311 aa11.44□□□□□ -0.58
HSPG2-206ENST00000439717 SPESP1Q6UW49 350 aa11.44□□□□□ -0.58
HSPG2-206ENST00000439717 CEACAM20Q6UY09 585 aa11.44□□□□□ -0.58
HSPG2-206ENST00000439717 BPHLQ86WA6 291 aaPredicted RBP11.44□□□□□ -0.58
HSPG2-206ENST00000439717 RASGRP3Q8IV61 690 aa11.44□□□□□ -0.58
HSPG2-206ENST00000439717 ZNF248Q8NDW4 579 aa11.44□□□□□ -0.58
HSPG2-206ENST00000439717 OR9A1PQ8NGU1 263 aa11.44□□□□□ -0.58
HSPG2-206ENST00000439717 OR2L8Q8NGY9 312 aa11.44□□□□□ -0.58
HSPG2-206ENST00000439717 HMGCLL1Q8TB92 370 aa11.44□□□□□ -0.58
HSPG2-206ENST00000439717 FBF1Q8TES7 1133 aa11.44□□□□□ -0.58
HSPG2-206ENST00000439717 ASB11Q8WXH4 323 aa11.44□□□□□ -0.58
HSPG2-206ENST00000439717 SLC22A18Q96BI1 424 aa11.44□□□□□ -0.58
HSPG2-206ENST00000439717 ELMO2Q96JJ3 720 aa11.44□□□□□ -0.58
HSPG2-206ENST00000439717 PITPNM3Q9BZ71 974 aa11.44□□□□□ -0.58
HSPG2-206ENST00000439717 SPATA7Q9P0W8 599 aa11.44□□□□□ -0.58
HSPG2-206ENST00000439717 LNPEPQ9UIQ6 1025 aa11.44□□□□□ -0.58
HSPG2-206ENST00000439717 TSR3Q9UJK0 312 aaKnown RBP11.44□□□□□ -0.58
HSPG2-206ENST00000439717 PLAGL1Q9UM63 463 aa11.44□□□□□ -0.58
HSPG2-206ENST00000439717 RUVBL2Q9Y230 463 aaKnown RBP11.44□□□□□ -0.58
HSPG2-206ENST00000439717 RAXQ9Y2V3 346 aa11.44□□□□□ -0.58
HSPG2-206ENST00000439717 PCDHB11Q9Y5F2 797 aa11.44□□□□□ -0.58
HSPG2-206ENST00000439717 CHD8Q9HCK8 2581 aa11.43□□□□□ -0.58
HSPG2-206ENST00000439717 FAM95CA0A1B0GW59 222 aa11.43□□□□□ -0.58
HSPG2-206ENST00000439717 ZNF839A8K0R7 811 aa11.43□□□□□ -0.58
HSPG2-206ENST00000439717 ARHGEF33A8MVX0 844 aa11.43□□□□□ -0.58
HSPG2-206ENST00000439717 ESPNB1AK53 854 aa11.43□□□□□ -0.58
HSPG2-206ENST00000439717 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.43□□□□□ -0.58
HSPG2-206ENST00000439717 MYO1CO00159 1063 aa11.43□□□□□ -0.58
HSPG2-206ENST00000439717 POLR1CO15160 346 aaPredicted RBP11.43□□□□□ -0.58
HSPG2-206ENST00000439717 SLC16A5O15375 505 aa11.43□□□□□ -0.58
HSPG2-206ENST00000439717 RRP8O43159 456 aaKnown RBP11.43□□□□□ -0.58
HSPG2-206ENST00000439717 MAP3K7O43318 606 aa11.43□□□□□ -0.58
HSPG2-206ENST00000439717 ZBTB14O43829 449 aa11.43□□□□□ -0.58
HSPG2-206ENST00000439717 PRAMEF10O60809 474 aa11.43□□□□□ -0.58
HSPG2-206ENST00000439717 FKBP9O95302 570 aa11.43□□□□□ -0.58
HSPG2-206ENST00000439717 C8GP07360 202 aa11.43□□□□□ -0.58
HSPG2-206ENST00000439717 RHOXF2BP0C7M4 288 aa11.43□□□□□ -0.58
HSPG2-206ENST00000439717 UGT2B7P16662 529 aa11.43□□□□□ -0.58
HSPG2-206ENST00000439717 CDH3P22223 829 aa11.43□□□□□ -0.58
HSPG2-206ENST00000439717 MAP4P27816 1152 aaKnown RBP11.43□□□□□ -0.58
HSPG2-206ENST00000439717 EIF2S3P41091 472 aaKnown RBP11.43□□□□□ -0.58
HSPG2-206ENST00000439717 BDKRB1P46663 353 aa11.43□□□□□ -0.58
HSPG2-206ENST00000439717 POU4F1Q01851 419 aa11.43□□□□□ -0.58
HSPG2-206ENST00000439717 ACY1Q03154 408 aa11.43□□□□□ -0.58
HSPG2-206ENST00000439717 SP140Q13342 867 aa11.43□□□□□ -0.58
HSPG2-206ENST00000439717 ARHGAP19Q14CB8 494 aa11.43□□□□□ -0.58
HSPG2-206ENST00000439717 CYP2A13Q16696 494 aa11.43□□□□□ -0.58
HSPG2-206ENST00000439717 SLC5A12Q1EHB4 618 aa11.43□□□□□ -0.58
HSPG2-206ENST00000439717 KBTBD12Q3ZCT8 623 aa11.43□□□□□ -0.58
HSPG2-206ENST00000439717 CCSMST1Q4G0I0 132 aa11.43□□□□□ -0.58
HSPG2-206ENST00000439717 TMTC4Q5T4D3 741 aa11.43□□□□□ -0.58
HSPG2-206ENST00000439717 GRTP1Q5TC63 336 aa11.43□□□□□ -0.58
HSPG2-206ENST00000439717 ANKS6Q68DC2 871 aa11.43□□□□□ -0.58
HSPG2-206ENST00000439717 CTAGE3PQ8IX95 158 aa11.43□□□□□ -0.58
HSPG2-206ENST00000439717 MYO1HQ8N1T3 1032 aa11.43□□□□□ -0.58
HSPG2-206ENST00000439717 D2HGDHQ8N465 521 aa11.43□□□□□ -0.58
HSPG2-206ENST00000439717 LINC01555Q8NAE3 123 aa11.43□□□□□ -0.58
HSPG2-206ENST00000439717 FLVCR1-AS1Q8TAF5 88 aa11.43□□□□□ -0.58
HSPG2-206ENST00000439717 EEF1AKMT1Q8WVE0 214 aa11.43□□□□□ -0.58
HSPG2-206ENST00000439717 VPS39Q96JC1 886 aa11.43□□□□□ -0.58
HSPG2-206ENST00000439717 OR2A14Q96R47 310 aa11.43□□□□□ -0.58
HSPG2-206ENST00000439717 RBBP8Q99708 897 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms