RNA–Protein interactions for RNA: ENST00000439487.5

SEMA3B-206, Transcript of semaphorin 3B, humanhuman

TSL 3

Gene SEMA3B, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-206ENST00000439487 CBSP35520 551 aa18.87■□□□□ 0.61
SEMA3B-206ENST00000439487 PDAP1Q13442 181 aaKnown RBP18.87■□□□□ 0.61
SEMA3B-206ENST00000439487 EFTUD2Q15029 972 aaKnown RBP eCLIP18.87■□□□□ 0.613e-7■■■□□ 15.5
SEMA3B-206ENST00000439487 FAM129CQ86XR2 697 aa18.87■□□□□ 0.61
SEMA3B-206ENST00000439487 C2orf73Q8N5S3 287 aaPredicted RBP18.87■□□□□ 0.61
SEMA3B-206ENST00000439487 EEF1AKMT1Q8WVE0 214 aa18.87■□□□□ 0.61
SEMA3B-206ENST00000439487 ZCCHC14Q8WYQ9 949 aaKnown RBP18.87■□□□□ 0.61
SEMA3B-206ENST00000439487 RAD51AP1Q96B01 352 aa18.87■□□□□ 0.61
SEMA3B-206ENST00000439487 VPS39Q96JC1 886 aa18.87■□□□□ 0.61
SEMA3B-206ENST00000439487 CPNE1Q99829 537 aa18.87■□□□□ 0.61
SEMA3B-206ENST00000439487 MENTQ9BUN1 341 aa18.87■□□□□ 0.61
SEMA3B-206ENST00000439487 ZNF768Q9H5H4 540 aaKnown RBP18.87■□□□□ 0.61
SEMA3B-206ENST00000439487 ASCL3Q9NQ33 180 aa18.87■□□□□ 0.61
SEMA3B-206ENST00000439487 SPHK1Q9NYA1 384 aa18.87■□□□□ 0.61
SEMA3B-206ENST00000439487 ACTR10Q9NZ32 417 aa18.87■□□□□ 0.61
SEMA3B-206ENST00000439487 TXNDC16Q9P2K2 825 aa18.87■□□□□ 0.61
SEMA3B-206ENST00000439487 DKK4Q9UBT3 224 aa18.87■□□□□ 0.61
SEMA3B-206ENST00000439487 POMT2Q9UKY4 750 aa18.87■□□□□ 0.61
SEMA3B-206ENST00000439487 MTO1Q9Y2Z2 717 aaKnown RBP18.87■□□□□ 0.61
SEMA3B-206ENST00000439487 PIPSLA2A3N6 862 aa18.86■□□□□ 0.61
SEMA3B-206ENST00000439487 ARHGEF33A8MVX0 844 aa18.86■□□□□ 0.61
SEMA3B-206ENST00000439487 TOX3O15405 576 aaPredicted RBP18.86■□□□□ 0.61
SEMA3B-206ENST00000439487 PSIP1O75475 530 aaKnown RBP18.86■□□□□ 0.61
SEMA3B-206ENST00000439487 FAM155BO75949 473 aa18.86■□□□□ 0.61
SEMA3B-206ENST00000439487 DXOO77932 396 aaKnown RBP18.86■□□□□ 0.61
SEMA3B-206ENST00000439487 CHRM5P08912 532 aaPredicted RBP18.86■□□□□ 0.61
SEMA3B-206ENST00000439487 PRDX3P30048 256 aaKnown RBP18.86■□□□□ 0.61
SEMA3B-206ENST00000439487 CCNFP41002 786 aa18.86■□□□□ 0.61
SEMA3B-206ENST00000439487 RGS4P49798 205 aa18.86■□□□□ 0.61
SEMA3B-206ENST00000439487 RAB28P51157 221 aa18.86■□□□□ 0.61
SEMA3B-206ENST00000439487 TAS2R39P59534 338 aa18.86■□□□□ 0.61
SEMA3B-206ENST00000439487 EEF1AKMT2Q5JPI9 291 aaKnown RBP18.86■□□□□ 0.61
SEMA3B-206ENST00000439487 IGF2-ASQ6U949 168 aa18.86■□□□□ 0.61
SEMA3B-206ENST00000439487 KLHL6Q8WZ60 621 aa18.86■□□□□ 0.61
SEMA3B-206ENST00000439487 USP7Q93009 1102 aa18.86■□□□□ 0.61
SEMA3B-206ENST00000439487 CD180Q99467 661 aa18.86■□□□□ 0.61
SEMA3B-206ENST00000439487 OR6C2Q9NZP2 312 aa18.86■□□□□ 0.61
SEMA3B-206ENST00000439487 SLC39A10Q9ULF5 831 aa18.86■□□□□ 0.61
SEMA3B-206ENST00000439487 TMEM8BA6NDV4 472 aa18.85■□□□□ 0.61
SEMA3B-206ENST00000439487 TLCD2A6NGC4 264 aa18.85■□□□□ 0.61
SEMA3B-206ENST00000439487 C2orf74A8MZ97 194 aa18.85■□□□□ 0.61
SEMA3B-206ENST00000439487 EIF3FO00303 357 aaPredicted RBP18.85■□□□□ 0.61
SEMA3B-206ENST00000439487 MATN2O00339 956 aa18.85■□□□□ 0.61
SEMA3B-206ENST00000439487 RASGRF2O14827 1237 aa18.85■□□□□ 0.61
SEMA3B-206ENST00000439487 ACSL3O95573 720 aa18.85■□□□□ 0.61
SEMA3B-206ENST00000439487 CATP04040 527 aaKnown RBP18.85■□□□□ 0.61
SEMA3B-206ENST00000439487 ITGA2BP08514 1039 aa18.85■□□□□ 0.61
SEMA3B-206ENST00000439487 CDH3P22223 829 aa18.85■□□□□ 0.61
SEMA3B-206ENST00000439487 GP5P40197 560 aa18.85■□□□□ 0.61
SEMA3B-206ENST00000439487 TBC1D25Q3MII6 688 aa18.85■□□□□ 0.61
SEMA3B-206ENST00000439487 TAX1BP1Q86VP1 789 aa18.85■□□□□ 0.61
SEMA3B-206ENST00000439487 BMPERQ8N8U9 685 aa18.85■□□□□ 0.61
SEMA3B-206ENST00000439487 LINC01555Q8NAE3 123 aa18.85■□□□□ 0.61
SEMA3B-206ENST00000439487 KDF1Q8NAX2 398 aaPredicted RBP18.85■□□□□ 0.61
SEMA3B-206ENST00000439487 MAGEC3Q8TD91 643 aa18.85■□□□□ 0.61
SEMA3B-206ENST00000439487 ASB11Q8WXH4 323 aa18.85■□□□□ 0.61
SEMA3B-206ENST00000439487 UBXN4Q92575 508 aa18.85■□□□□ 0.61
SEMA3B-206ENST00000439487 LINGO1Q96FE5 620 aa18.85■□□□□ 0.61
SEMA3B-206ENST00000439487 ZNF578Q96N58 590 aaPredicted RBP18.85■□□□□ 0.61
SEMA3B-206ENST00000439487 RBBP8Q99708 897 aa18.85■□□□□ 0.61
SEMA3B-206ENST00000439487 SLC39A1Q9NY26 324 aa18.85■□□□□ 0.61
SEMA3B-206ENST00000439487 SEMA5BQ9P283 1151 aa18.85■□□□□ 0.61
SEMA3B-206ENST00000439487 CDRT15L2A8MXV6 281 aa18.84■□□□□ 0.61
SEMA3B-206ENST00000439487 ISM1B1AKI9 464 aa18.84■□□□□ 0.61
SEMA3B-206ENST00000439487 TAF4O00268 1085 aa18.84■□□□□ 0.61
SEMA3B-206ENST00000439487 TLX3O43711 291 aaPredicted RBP18.84■□□□□ 0.61
SEMA3B-206ENST00000439487 UGT2B7P16662 529 aa18.84■□□□□ 0.61
SEMA3B-206ENST00000439487 PEBP1P30086 187 aaKnown RBP18.84■□□□□ 0.61
SEMA3B-206ENST00000439487 PHBP35232 272 aa18.84■□□□□ 0.61
SEMA3B-206ENST00000439487 IL2P60568 153 aa18.84■□□□□ 0.61
SEMA3B-206ENST00000439487 SH3BP2P78314 561 aa18.84■□□□□ 0.61
SEMA3B-206ENST00000439487 ZNF460Q14592 562 aa18.84■□□□□ 0.61
SEMA3B-206ENST00000439487 GRTP1Q5TC63 336 aa18.84■□□□□ 0.61
SEMA3B-206ENST00000439487 TMEM207Q6UWW9 146 aa18.84■□□□□ 0.61
SEMA3B-206ENST00000439487 UBE2R2Q712K3 238 aaPredicted RBP18.84■□□□□ 0.61
SEMA3B-206ENST00000439487 TRIM73Q86UV7 250 aa18.84■□□□□ 0.61
SEMA3B-206ENST00000439487 RASGRP3Q8IV61 690 aa18.84■□□□□ 0.61
SEMA3B-206ENST00000439487 GSPT2Q8IYD1 628 aaKnown RBP18.84■□□□□ 0.61
SEMA3B-206ENST00000439487 MYO1HQ8N1T3 1032 aa18.84■□□□□ 0.61
SEMA3B-206ENST00000439487 OR9A1PQ8NGU1 263 aa18.84■□□□□ 0.61
SEMA3B-206ENST00000439487 OR2L8Q8NGY9 312 aa18.84■□□□□ 0.61
SEMA3B-206ENST00000439487 DENND1AQ8TEH3 1009 aa18.84■□□□□ 0.61
SEMA3B-206ENST00000439487 PMEPA1Q969W9 287 aa18.84■□□□□ 0.61
SEMA3B-206ENST00000439487 MRRFQ96E11 262 aaKnown RBP18.84■□□□□ 0.61
SEMA3B-206ENST00000439487 OR2A14Q96R47 310 aa18.84■□□□□ 0.61
SEMA3B-206ENST00000439487 TAAR9Q96RI9 348 aa18.84■□□□□ 0.61
SEMA3B-206ENST00000439487 PKP4Q99569 1192 aa18.84■□□□□ 0.61
SEMA3B-206ENST00000439487 CAB39LQ9H9S4 337 aa18.84■□□□□ 0.61
SEMA3B-206ENST00000439487 THSD1Q9NS62 852 aa18.84■□□□□ 0.61
SEMA3B-206ENST00000439487 SIDT1Q9NXL6 827 aaKnown RBP18.84■□□□□ 0.61
SEMA3B-206ENST00000439487 SEC16AO15027 2179 aa18.83■□□□□ 0.61
SEMA3B-206ENST00000439487 MDC1Q14676 2089 aaKnown RBP18.83■□□□□ 0.61
SEMA3B-206ENST00000439487 SLC9B1P1A6NJY1 282 aa18.83■□□□□ 0.6
SEMA3B-206ENST00000439487 B4E171 279 aa18.83■□□□□ 0.6
SEMA3B-206ENST00000439487 C9orf172C9J069 976 aa18.83■□□□□ 0.6
SEMA3B-206ENST00000439487 GFYI3L273 518 aa18.83■□□□□ 0.6
SEMA3B-206ENST00000439487 PRAMEF10O60809 474 aa18.83■□□□□ 0.6
SEMA3B-206ENST00000439487 TSPAN12O95859 305 aa18.83■□□□□ 0.6
SEMA3B-206ENST00000439487 FAM153BP0C7A2 387 aa18.83■□□□□ 0.6
SEMA3B-206ENST00000439487 NELFEP18615 380 aaKnown RBP18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms