RNA–Protein interactions for RNA: ENST00000438395.5

VPS50-204, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 3

Gene VPS50, Length 538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-204ENST00000438395 BOP1Q14137 746 aaKnown RBP7.52□□□□□ -1.21
VPS50-204ENST00000438395 NADK2Q4G0N4 442 aa7.52□□□□□ -1.21
VPS50-204ENST00000438395 CAPRIN2Q6IMN6 1127 aaKnown RBP7.52□□□□□ -1.21
VPS50-204ENST00000438395 RANBP10Q6VN20 620 aa7.52□□□□□ -1.21
VPS50-204ENST00000438395 LINC00114Q6XXX2 140 aa7.52□□□□□ -1.21
VPS50-204ENST00000438395 MED25Q71SY5 747 aa7.52□□□□□ -1.21
VPS50-204ENST00000438395 SERPINA9Q86WD7 417 aa7.52□□□□□ -1.21
VPS50-204ENST00000438395 TMTC1Q8IUR5 882 aa7.52□□□□□ -1.21
VPS50-204ENST00000438395 DSELQ8IZU8 1212 aa7.52□□□□□ -1.21
VPS50-204ENST00000438395 TXLNBQ8N3L3 684 aa7.52□□□□□ -1.21
VPS50-204ENST00000438395 LILRA3Q8N6C8 439 aaPredicted RBP7.52□□□□□ -1.21
VPS50-204ENST00000438395 UBL4BQ8N7F7 174 aa7.52□□□□□ -1.21
VPS50-204ENST00000438395 OR52E1Q8NGJ3 308 aa7.52□□□□□ -1.21
VPS50-204ENST00000438395 OR1L3Q8NH93 324 aa7.52□□□□□ -1.21
VPS50-204ENST00000438395 GSDMBQ8TAX9 411 aa7.52□□□□□ -1.21
VPS50-204ENST00000438395 CCDC110Q8TBZ0 833 aa7.52□□□□□ -1.21
VPS50-204ENST00000438395 TM9SF4Q92544 642 aa7.52□□□□□ -1.21
VPS50-204ENST00000438395 TFGQ92734 400 aaPredicted RBP7.52□□□□□ -1.21
VPS50-204ENST00000438395 DNAJC1Q96KC8 554 aaKnown RBP7.52□□□□□ -1.21
VPS50-204ENST00000438395 PPM1MQ96MI6 270 aa7.52□□□□□ -1.21
VPS50-204ENST00000438395 FAM118BQ9BPY3 351 aa7.52□□□□□ -1.21
VPS50-204ENST00000438395 C19orf43Q9BQ61 176 aa7.52□□□□□ -1.21
VPS50-204ENST00000438395 DHRS4Q9BTZ2 278 aa7.52□□□□□ -1.21
VPS50-204ENST00000438395 KLHL25Q9H0H3 589 aa7.52□□□□□ -1.21
VPS50-204ENST00000438395 LRRC40Q9H9A6 602 aa7.52□□□□□ -1.21
VPS50-204ENST00000438395 AKIRIN1Q9H9L7 192 aaPredicted RBP7.52□□□□□ -1.21
VPS50-204ENST00000438395 TXLNGQ9NUQ3 528 aa7.52□□□□□ -1.21
VPS50-204ENST00000438395 SMARCAL1Q9NZC9 954 aa7.52□□□□□ -1.21
VPS50-204ENST00000438395 NDOR1Q9UHB4 597 aa7.52□□□□□ -1.21
VPS50-204ENST00000438395 MKL2Q9ULH7 1088 aa7.52□□□□□ -1.21
VPS50-204ENST00000438395 SRPK3Q9UPE1 567 aa7.52□□□□□ -1.21
VPS50-204ENST00000438395 ASF1AQ9Y294 204 aa7.52□□□□□ -1.21
VPS50-204ENST00000438395 EFR3BQ9Y2G0 817 aa7.52□□□□□ -1.21
VPS50-204ENST00000438395 TDRKHQ9Y2W6 561 aaKnown RBP7.52□□□□□ -1.21
VPS50-204ENST00000438395 AP1M2Q9Y6Q5 423 aa7.52□□□□□ -1.21
VPS50-204ENST00000438395 DOPEY1Q5JWR5 2465 aa7.52□□□□□ -1.21
VPS50-204ENST00000438395 CLEC18AA5D8T8 446 aa7.51□□□□□ -1.21
VPS50-204ENST00000438395 LIN7AO14910 233 aaPredicted RBP7.51□□□□□ -1.21
VPS50-204ENST00000438395 ZNF749O43361 778 aa7.51□□□□□ -1.21
VPS50-204ENST00000438395 AP2A2O94973 939 aa7.51□□□□□ -1.21
VPS50-204ENST00000438395 LCA5LO95447 670 aa7.51□□□□□ -1.21
VPS50-204ENST00000438395 RPN2P04844 631 aa7.51□□□□□ -1.21
VPS50-204ENST00000438395 MSL3P1P0C860 447 aa7.51□□□□□ -1.21
VPS50-204ENST00000438395 PVRP15151 417 aa7.51□□□□□ -1.21
VPS50-204ENST00000438395 ST6GAL1P15907 406 aa7.51□□□□□ -1.21
VPS50-204ENST00000438395 CA5AP35218 305 aa7.51□□□□□ -1.21
VPS50-204ENST00000438395 FOLR3P41439 243 aa7.51□□□□□ -1.21
VPS50-204ENST00000438395 NSG1P42857 185 aa7.51□□□□□ -1.21
VPS50-204ENST00000438395 UQCRFS1P47985 274 aa7.51□□□□□ -1.21
VPS50-204ENST00000438395 XIAPP98170 497 aa7.51□□□□□ -1.21
VPS50-204ENST00000438395 OLIG2Q13516 323 aa7.51□□□□□ -1.21
VPS50-204ENST00000438395 RAPSNQ13702 412 aa7.51□□□□□ -1.21
VPS50-204ENST00000438395 LAMB3Q13751 1172 aa7.51□□□□□ -1.21
VPS50-204ENST00000438395 ELOAQ14241 798 aaKnown RBP7.51□□□□□ -1.21
VPS50-204ENST00000438395 SPARCL1Q14515 664 aa7.51□□□□□ -1.21
VPS50-204ENST00000438395 POU6F1Q14863 301 aa7.51□□□□□ -1.21
VPS50-204ENST00000438395 INPP5JQ15735 1006 aaPredicted RBP7.51□□□□□ -1.21
VPS50-204ENST00000438395 CYP2A13Q16696 494 aa7.51□□□□□ -1.21
VPS50-204ENST00000438395 PLEKHS1Q5SXH7 462 aa7.51□□□□□ -1.21
VPS50-204ENST00000438395 VWA5B1Q5TIE3 1220 aa7.51□□□□□ -1.21
VPS50-204ENST00000438395 PRAMEF17Q5VTA0 474 aa7.51□□□□□ -1.21
VPS50-204ENST00000438395 IRAK1BP1Q5VVH5 260 aa7.51□□□□□ -1.21
VPS50-204ENST00000438395 MLIPQ5VWP3 458 aa7.51□□□□□ -1.21
VPS50-204ENST00000438395 LYPLAL1Q5VWZ2 237 aa7.51□□□□□ -1.21
VPS50-204ENST00000438395 SPESP1Q6UW49 350 aa7.51□□□□□ -1.21
VPS50-204ENST00000438395 FAM198BQ6UWH4 519 aa7.51□□□□□ -1.21
VPS50-204ENST00000438395 CLEC18BQ6UXF7 455 aa7.51□□□□□ -1.21
VPS50-204ENST00000438395 MRGPREQ86SM8 312 aa7.51□□□□□ -1.21
VPS50-204ENST00000438395 KIAA1328Q86T90 577 aa7.51□□□□□ -1.21
VPS50-204ENST00000438395 LINC00523Q86TU6 105 aa7.51□□□□□ -1.21
VPS50-204ENST00000438395 IQCKQ8N0W5 287 aa7.51□□□□□ -1.21
VPS50-204ENST00000438395 CLDN19Q8N6F1 224 aa7.51□□□□□ -1.21
VPS50-204ENST00000438395 C19orf47Q8N9M1 422 aaKnown RBP7.51□□□□□ -1.21
VPS50-204ENST00000438395 DNAAF3Q8N9W5 541 aa7.51□□□□□ -1.21
VPS50-204ENST00000438395 FAM71DQ8N9W8 422 aa7.51□□□□□ -1.21
VPS50-204ENST00000438395 CLEC18CQ8NCF0 446 aa7.51□□□□□ -1.21
VPS50-204ENST00000438395 PHC3Q8NDX5 983 aa7.51□□□□□ -1.21
VPS50-204ENST00000438395 SSC4DQ8WTU2 575 aa7.51□□□□□ -1.21
VPS50-204ENST00000438395 ELMO1Q92556 727 aa7.51□□□□□ -1.21
VPS50-204ENST00000438395 TCTN2Q96GX1 697 aa7.51□□□□□ -1.21
VPS50-204ENST00000438395 FER1L6-AS2Q96M78 137 aa7.51□□□□□ -1.21
VPS50-204ENST00000438395 NDC1Q9BTX1 674 aa7.51□□□□□ -1.21
VPS50-204ENST00000438395 TSSK1BQ9BXA7 367 aa7.51□□□□□ -1.21
VPS50-204ENST00000438395 PITPNM3Q9BZ71 974 aa7.51□□□□□ -1.21
VPS50-204ENST00000438395 OR52A5Q9H2C5 316 aa7.51□□□□□ -1.21
VPS50-204ENST00000438395 TFB2MQ9H5Q4 396 aaKnown RBP7.51□□□□□ -1.21
VPS50-204ENST00000438395 XKR8Q9H6D3 395 aa7.51□□□□□ -1.21
VPS50-204ENST00000438395 CASS4Q9NQ75 786 aa7.51□□□□□ -1.21
VPS50-204ENST00000438395 PCMTD2Q9NV79 361 aa7.51□□□□□ -1.21
VPS50-204ENST00000438395 ACTR10Q9NZ32 417 aa7.51□□□□□ -1.21
VPS50-204ENST00000438395 LUZP4Q9P127 313 aa7.51□□□□□ -1.21
VPS50-204ENST00000438395 IFT80Q9P2H3 777 aaPredicted RBP7.51□□□□□ -1.21
VPS50-204ENST00000438395 POLG2Q9UHN1 485 aa7.51□□□□□ -1.21
VPS50-204ENST00000438395 PCDHA3Q9Y5H8 950 aa7.51□□□□□ -1.21
VPS50-204ENST00000438395 CREBBPQ92793 2442 aa7.51□□□□□ -1.21
VPS50-204ENST00000438395 IGLV3-16A0A075B6K0 115 aa7.5□□□□□ -1.21
VPS50-204ENST00000438395 E7EVH7 732 aa7.5□□□□□ -1.21
VPS50-204ENST00000438395 BTN3A3O00478 584 aa7.5□□□□□ -1.21
VPS50-204ENST00000438395 ZSCAN9O15535 394 aaPredicted RBP7.5□□□□□ -1.21
VPS50-204ENST00000438395 PSMD3O43242 534 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms