RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 NR2F6P10588 404 aa6.55□□□□□ -1.36
CSDE1-205ENST00000438362 IMPDH2P12268 514 aa6.55□□□□□ -1.36
CSDE1-205ENST00000438362 FPR1P21462 350 aa6.55□□□□□ -1.36
CSDE1-205ENST00000438362 S100A1P23297 94 aa6.55□□□□□ -1.36
CSDE1-205ENST00000438362 MAGEA12P43365 314 aa6.55□□□□□ -1.36
CSDE1-205ENST00000438362 CDH12P55289 794 aa6.55□□□□□ -1.36
CSDE1-205ENST00000438362 NFATC3Q12968 1075 aa6.55□□□□□ -1.36
CSDE1-205ENST00000438362 GCNT6Q5T4J0 391 aa6.55□□□□□ -1.36
CSDE1-205ENST00000438362 ZNF57Q68EA5 555 aaPredicted RBP6.55□□□□□ -1.36
CSDE1-205ENST00000438362 OR4F3Q6IEY1 312 aa6.55□□□□□ -1.36
CSDE1-205ENST00000438362 PAQR9Q6ZVX9 377 aa6.55□□□□□ -1.36
CSDE1-205ENST00000438362 CYP2U1Q7Z449 544 aa6.55□□□□□ -1.36
CSDE1-205ENST00000438362 TMPRSS11BQ86T26 416 aa6.55□□□□□ -1.36
CSDE1-205ENST00000438362 ZFAND4Q86XD8 727 aa6.55□□□□□ -1.36
CSDE1-205ENST00000438362 C2orf15Q8WU43 125 aaKnown RBP6.55□□□□□ -1.36
CSDE1-205ENST00000438362 PIH1D2Q8WWB5 315 aa6.55□□□□□ -1.36
CSDE1-205ENST00000438362 PYCR2Q96C36 320 aa6.55□□□□□ -1.36
CSDE1-205ENST00000438362 ERLEC1Q96DZ1 483 aa6.55□□□□□ -1.36
CSDE1-205ENST00000438362 YME1L1Q96TA2 773 aa6.55□□□□□ -1.36
CSDE1-205ENST00000438362 HDHD2Q9H0R4 259 aa6.55□□□□□ -1.36
CSDE1-205ENST00000438362 DCSTAMPQ9H295 470 aa6.55□□□□□ -1.36
CSDE1-205ENST00000438362 TPK1Q9H3S4 243 aa6.55□□□□□ -1.36
CSDE1-205ENST00000438362 OSGEPL1Q9H4B0 414 aa6.55□□□□□ -1.36
CSDE1-205ENST00000438362 KRCC1Q9NPI7 259 aaPredicted RBP6.55□□□□□ -1.36
CSDE1-205ENST00000438362 DHRS7Q9Y394 339 aa6.55□□□□□ -1.36
CSDE1-205ENST00000438362 GLTPD2A6NH11 291 aa6.54□□□□□ -1.36
CSDE1-205ENST00000438362 HAS3O00219 553 aa6.54□□□□□ -1.36
CSDE1-205ENST00000438362 MANBAO00462 879 aa6.54□□□□□ -1.36
CSDE1-205ENST00000438362 FBP2O00757 339 aa6.54□□□□□ -1.36
CSDE1-205ENST00000438362 ACOT8O14734 319 aa6.54□□□□□ -1.36
CSDE1-205ENST00000438362 KDELR3O43731 214 aa6.54□□□□□ -1.36
CSDE1-205ENST00000438362 OR1I1O60431 355 aa6.54□□□□□ -1.36
CSDE1-205ENST00000438362 ZNF623O75123 536 aa6.54□□□□□ -1.36
CSDE1-205ENST00000438362 DNAJB5O75953 348 aa6.54□□□□□ -1.36
CSDE1-205ENST00000438362 HPRP00739 348 aa6.54□□□□□ -1.36
CSDE1-205ENST00000438362 RPLP0P05388 317 aaKnown RBP6.54□□□□□ -1.36
CSDE1-205ENST00000438362 ZNF26P17031 533 aaPredicted RBP6.54□□□□□ -1.36
CSDE1-205ENST00000438362 PAICSP22234 425 aaKnown RBP6.54□□□□□ -1.36
CSDE1-205ENST00000438362 PSMA1P25786 263 aaKnown RBP6.54□□□□□ -1.36
CSDE1-205ENST00000438362 MAGEA11P43364 429 aa6.54□□□□□ -1.36
CSDE1-205ENST00000438362 ARCN1P48444 511 aaKnown RBP6.54□□□□□ -1.36
CSDE1-205ENST00000438362 BCAP31P51572 246 aa6.54□□□□□ -1.36
CSDE1-205ENST00000438362 NDUFA5Q16718 116 aa6.54□□□□□ -1.36
CSDE1-205ENST00000438362 CAPN13Q6MZZ7 669 aaPredicted RBP6.54□□□□□ -1.36
CSDE1-205ENST00000438362 CES5AQ6NT32 575 aa6.54□□□□□ -1.36
CSDE1-205ENST00000438362 EPHX4Q8IUS5 362 aa6.54□□□□□ -1.36
CSDE1-205ENST00000438362 PHACTR4Q8IZ21 702 aa6.54□□□□□ -1.36
CSDE1-205ENST00000438362 SHKBP1Q8TBC3 707 aa6.54□□□□□ -1.36
CSDE1-205ENST00000438362 GAB3Q8WWW8 586 aa6.54□□□□□ -1.36
CSDE1-205ENST00000438362 NT5C3BQ969T7 300 aa6.54□□□□□ -1.36
CSDE1-205ENST00000438362 TMEM125Q96AQ2 219 aa6.54□□□□□ -1.36
CSDE1-205ENST00000438362 PHF21AQ96BD5 680 aa6.54□□□□□ -1.36
CSDE1-205ENST00000438362 C3orf30Q96M34 536 aa6.54□□□□□ -1.36
CSDE1-205ENST00000438362 ZNF558Q96NG5 402 aa6.54□□□□□ -1.36
CSDE1-205ENST00000438362 TEFMQ96QE5 360 aaKnown RBP6.54□□□□□ -1.36
CSDE1-205ENST00000438362 MTERF1Q99551 399 aaKnown RBP6.54□□□□□ -1.36
CSDE1-205ENST00000438362 DUSP26Q9BV47 211 aa6.54□□□□□ -1.36
CSDE1-205ENST00000438362 CXCL16Q9H2A7 254 aa6.54□□□□□ -1.36
CSDE1-205ENST00000438362 CRISPLD1Q9H336 500 aa6.54□□□□□ -1.36
CSDE1-205ENST00000438362 RRAGCQ9HB90 399 aa6.54□□□□□ -1.36
CSDE1-205ENST00000438362 ARNT2Q9HBZ2 717 aa6.54□□□□□ -1.36
CSDE1-205ENST00000438362 AGPAT4Q9NRZ5 378 aa6.54□□□□□ -1.36
CSDE1-205ENST00000438362 TMLHEQ9NVH6 421 aa6.54□□□□□ -1.36
CSDE1-205ENST00000438362 CCDC182A6NF36 153 aa6.54□□□□□ -1.36
CSDE1-205ENST00000438362 FADS2P1A8MWK0 482 aa6.54□□□□□ -1.36
CSDE1-205ENST00000438362 PRR23D1E9PI22 279 aaPredicted RBP6.54□□□□□ -1.36
CSDE1-205ENST00000438362 TFECO14948 347 aaPredicted RBP6.54□□□□□ -1.36
CSDE1-205ENST00000438362 AREL1O15033 823 aa6.54□□□□□ -1.36
CSDE1-205ENST00000438362 VILLO15195 856 aa6.54□□□□□ -1.36
CSDE1-205ENST00000438362 GNAO1P09471 354 aa6.54□□□□□ -1.36
CSDE1-205ENST00000438362 PRR23D2P0DMB1 279 aaPredicted RBP6.54□□□□□ -1.36
CSDE1-205ENST00000438362 ANXA8P13928 327 aa6.54□□□□□ -1.36
CSDE1-205ENST00000438362 ENGP17813 658 aa6.54□□□□□ -1.36
CSDE1-205ENST00000438362 RPL17P18621 184 aaKnown RBP6.54□□□□□ -1.36
CSDE1-205ENST00000438362 PTX3P26022 381 aaPredicted RBP6.54□□□□□ -1.36
CSDE1-205ENST00000438362 GABRR2P28476 465 aa6.54□□□□□ -1.36
CSDE1-205ENST00000438362 PRKAG1P54619 331 aa6.54□□□□□ -1.36
CSDE1-205ENST00000438362 FOXA1P55317 472 aa6.54□□□□□ -1.36
CSDE1-205ENST00000438362 TAB1Q15750 504 aa6.54□□□□□ -1.36
CSDE1-205ENST00000438362 TIGD6Q17RP2 521 aa6.54□□□□□ -1.36
CSDE1-205ENST00000438362 MPPE1Q53F39 396 aa6.54□□□□□ -1.36
CSDE1-205ENST00000438362 IFI44LQ53G44 452 aa6.54□□□□□ -1.36
CSDE1-205ENST00000438362 ATAD3BQ5T9A4 648 aa6.54□□□□□ -1.36
CSDE1-205ENST00000438362 FOXB2Q5VYV0 432 aa6.54□□□□□ -1.36
CSDE1-205ENST00000438362 PRSS55Q6UWB4 352 aaPredicted RBP6.54□□□□□ -1.36
CSDE1-205ENST00000438362 RAVER1Q8IY67 606 aaKnown RBP6.54□□□□□ -1.36
CSDE1-205ENST00000438362 FBXO22Q8NEZ5 403 aa6.54□□□□□ -1.36
CSDE1-205ENST00000438362 OR52B6Q8NGF0 335 aa6.54□□□□□ -1.36
CSDE1-205ENST00000438362 TRUB1Q8WWH5 349 aaKnown RBP6.54□□□□□ -1.36
CSDE1-205ENST00000438362 NACC2Q96BF6 587 aa6.54□□□□□ -1.36
CSDE1-205ENST00000438362 ZNF641Q96N77 438 aaPredicted RBP6.54□□□□□ -1.36
CSDE1-205ENST00000438362 ZNF347Q96SE7 839 aa6.54□□□□□ -1.36
CSDE1-205ENST00000438362 OSBPL10Q9BXB5 764 aa6.54□□□□□ -1.36
CSDE1-205ENST00000438362 C1QTNF1Q9BXJ1 281 aa6.54□□□□□ -1.36
CSDE1-205ENST00000438362 FAM83DQ9H4H8 585 aa6.54□□□□□ -1.36
CSDE1-205ENST00000438362 HMX1Q9NP08 348 aaPredicted RBP6.54□□□□□ -1.36
CSDE1-205ENST00000438362 FAIMQ9NVQ4 179 aa6.54□□□□□ -1.36
CSDE1-205ENST00000438362 CFAP97Q9P2B7 532 aa6.54□□□□□ -1.36
CSDE1-205ENST00000438362 RNF11Q9Y3C5 154 aa6.54□□□□□ -1.36
CSDE1-205ENST00000438362 PCDHGA11Q9Y5H2 935 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms