RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 BRWD1Q9NSI6 2320 aa25.06■■□□□ 1.6
CPNE1-216ENST00000437340 C15orf38-AP3S2A0A0A6YYH1 394 aa25.05■■□□□ 1.6
CPNE1-216ENST00000437340 TCRBV3S1A0A5B6 114 aa25.05■■□□□ 1.6
CPNE1-216ENST00000437340 C6P13671 934 aa25.05■■□□□ 1.6
CPNE1-216ENST00000437340 PEX2P28328 305 aa25.05■■□□□ 1.6
CPNE1-216ENST00000437340 RPL38P63173 70 aaKnown RBP25.05■■□□□ 1.6
CPNE1-216ENST00000437340 TIGD2Q4W5G0 525 aa25.05■■□□□ 1.6
CPNE1-216ENST00000437340 PAGE3Q5JUK9 113 aa25.05■■□□□ 1.6
CPNE1-216ENST00000437340 IRGCQ6NXR0 463 aa25.05■■□□□ 1.6
CPNE1-216ENST00000437340 NEK5Q6P3R8 708 aa25.05■■□□□ 1.6
CPNE1-216ENST00000437340 ARPINQ7Z6K5 226 aa25.05■■□□□ 1.6
CPNE1-216ENST00000437340 DHFR2Q86XF0 187 aa25.05■■□□□ 1.6
CPNE1-216ENST00000437340 SFTPA1Q8IWL2 248 aa25.05■■□□□ 1.6
CPNE1-216ENST00000437340 YAF2Q8IY57 180 aa25.05■■□□□ 1.6
CPNE1-216ENST00000437340 RGL4Q8IZJ4 473 aa25.05■■□□□ 1.6
CPNE1-216ENST00000437340 N4BP2L2Q92802 583 aaPredicted RBP25.05■■□□□ 1.6
CPNE1-216ENST00000437340 RAB7BQ96AH8 199 aa25.05■■□□□ 1.6
CPNE1-216ENST00000437340 LRTM1Q9HBL6 345 aa25.05■■□□□ 1.6
CPNE1-216ENST00000437340 FARSBQ9NSD9 589 aaKnown RBP25.05■■□□□ 1.6
CPNE1-216ENST00000437340 RIMS3Q9UJD0 308 aa25.05■■□□□ 1.6
CPNE1-216ENST00000437340 TCF20Q9UGU0 1960 aaKnown RBP25.05■■□□□ 1.6
CPNE1-216ENST00000437340 COL4A3Q01955 1670 aa25.05■■□□□ 1.6
CPNE1-216ENST00000437340 KCNE1BA0A087WTH5 132 aa25.05■■□□□ 1.6
CPNE1-216ENST00000437340 SERTM1A2A2V5 107 aa25.05■■□□□ 1.6
CPNE1-216ENST00000437340 LIN7AO14910 233 aaPredicted RBP25.05■■□□□ 1.6
CPNE1-216ENST00000437340 INPP4BO15327 924 aa25.05■■□□□ 1.6
CPNE1-216ENST00000437340 CATP04040 527 aaKnown RBP25.05■■□□□ 1.6
CPNE1-216ENST00000437340 POU3F3P20264 500 aaPredicted RBP25.05■■□□□ 1.6
CPNE1-216ENST00000437340 IGFBP4P22692 258 aa25.05■■□□□ 1.6
CPNE1-216ENST00000437340 IL12RB1P42701 662 aa25.05■■□□□ 1.6
CPNE1-216ENST00000437340 CACHD1Q5VU97 1274 aa25.05■■□□□ 1.6
CPNE1-216ENST00000437340 LPCAT4Q643R3 524 aa25.05■■□□□ 1.6
CPNE1-216ENST00000437340 KLHDC8AQ8IYD2 350 aa25.05■■□□□ 1.6
CPNE1-216ENST00000437340 SLC22A15Q8IZD6 547 aa25.05■■□□□ 1.6
CPNE1-216ENST00000437340 PLCD3Q8N3E9 789 aa25.05■■□□□ 1.6
CPNE1-216ENST00000437340 GLB1L3Q8NCI6 653 aaPredicted RBP25.05■■□□□ 1.6
CPNE1-216ENST00000437340 CATSPER1Q8NEC5 780 aa25.05■■□□□ 1.6
CPNE1-216ENST00000437340 SLC45A3Q96JT2 553 aa25.05■■□□□ 1.6
CPNE1-216ENST00000437340 CCDC138Q96M89 665 aa25.05■■□□□ 1.6
CPNE1-216ENST00000437340 MYADMQ96S97 322 aa25.05■■□□□ 1.6
CPNE1-216ENST00000437340 MUC13Q9H3R2 512 aa25.05■■□□□ 1.6
CPNE1-216ENST00000437340 C1orf109Q9NX04 203 aa25.05■■□□□ 1.6
CPNE1-216ENST00000437340 COQ6Q9Y2Z9 468 aa25.05■■□□□ 1.6
CPNE1-216ENST00000437340 ARHGEF33A8MVX0 844 aa25.04■■□□□ 1.6
CPNE1-216ENST00000437340 NPIPB8E9PQR5 432 aa25.04■■□□□ 1.6
CPNE1-216ENST00000437340 UGDHO60701 494 aa25.04■■□□□ 1.6
CPNE1-216ENST00000437340 CCR3P51677 355 aa25.04■■□□□ 1.6
CPNE1-216ENST00000437340 ATXN3P54252 364 aaPredicted RBP25.04■■□□□ 1.6
CPNE1-216ENST00000437340 CAPRIN1Q14444 709 aaKnown RBP25.04■■□□□ 1.6
CPNE1-216ENST00000437340 CPSF6Q16630 551 aaKnown RBP eCLIP25.04■■□□□ 1.6
CPNE1-216ENST00000437340 ZNF658BQ4V348 819 aaPredicted RBP25.04■■□□□ 1.6
CPNE1-216ENST00000437340 GOLM1Q8NBJ4 401 aa25.04■■□□□ 1.6
CPNE1-216ENST00000437340 TMEM125Q96AQ2 219 aa25.04■■□□□ 1.6
CPNE1-216ENST00000437340 ZNF514Q96K75 400 aaPredicted RBP25.04■■□□□ 1.6
CPNE1-216ENST00000437340 MSLNLQ96KJ4 702 aa25.04■■□□□ 1.6
CPNE1-216ENST00000437340 ZBTB18Q99592 522 aa25.04■■□□□ 1.6
CPNE1-216ENST00000437340 TRIM15Q9C019 465 aa25.04■■□□□ 1.6
CPNE1-216ENST00000437340 PRSS16Q9NQE7 514 aa25.04■■□□□ 1.6
CPNE1-216ENST00000437340 SLC22A14Q9Y267 594 aa25.04■■□□□ 1.6
CPNE1-216ENST00000437340 LZTS3O60299 673 aaPredicted RBP25.03■■□□□ 1.6
CPNE1-216ENST00000437340 KAT7O95251 611 aa25.03■■□□□ 1.6
CPNE1-216ENST00000437340 PRPH2P23942 346 aa25.03■■□□□ 1.6
CPNE1-216ENST00000437340 GRIA2P42262 883 aa25.03■■□□□ 1.6
CPNE1-216ENST00000437340 GPR1P46091 355 aa25.03■■□□□ 1.6
CPNE1-216ENST00000437340 PFN3P60673 137 aa25.03■■□□□ 1.6
CPNE1-216ENST00000437340 HMGCS1Q01581 520 aa25.03■■□□□ 1.6
CPNE1-216ENST00000437340 ZNF33BQ06732 778 aa25.03■■□□□ 1.6
CPNE1-216ENST00000437340 COL19A1Q14993 1142 aa25.03■■□□□ 1.6
CPNE1-216ENST00000437340 FOPNLQ96NB1 174 aa25.03■■□□□ 1.6
CPNE1-216ENST00000437340 ELOVL6Q9H5J4 265 aa25.03■■□□□ 1.6
CPNE1-216ENST00000437340 ZNHIT2Q9UHR6 403 aa25.03■■□□□ 1.6
CPNE1-216ENST00000437340 AP4S1Q9Y587 144 aa25.03■■□□□ 1.6
CPNE1-216ENST00000437340 MMP20O60882 483 aa25.03■■□□□ 1.6
CPNE1-216ENST00000437340 SEC22BO75396 215 aa25.03■■□□□ 1.6
CPNE1-216ENST00000437340 RSL1D1O76021 490 aaKnown RBP25.03■■□□□ 1.6
CPNE1-216ENST00000437340 CAPNS1P04632 268 aa25.03■■□□□ 1.6
CPNE1-216ENST00000437340 EPHX1P07099 455 aa25.03■■□□□ 1.6
CPNE1-216ENST00000437340 PSMC3P17980 439 aa25.03■■□□□ 1.6
CPNE1-216ENST00000437340 VARSP26640 1264 aaKnown RBP25.03■■□□□ 1.6
CPNE1-216ENST00000437340 CLNS1AP54105 237 aaKnown RBP25.03■■□□□ 1.6
CPNE1-216ENST00000437340 KLC1Q07866 573 aa25.03■■□□□ 1.6
CPNE1-216ENST00000437340 ABRQ12979 859 aa25.03■■□□□ 1.6
CPNE1-216ENST00000437340 EEF1AKMT2Q5JPI9 291 aaKnown RBP25.03■■□□□ 1.6
CPNE1-216ENST00000437340 FAM46CQ5VWP2 391 aa25.03■■□□□ 1.6
CPNE1-216ENST00000437340 NAIF1Q69YI7 327 aaPredicted RBP25.03■■□□□ 1.6
CPNE1-216ENST00000437340 RAET1GQ6H3X3 334 aa25.03■■□□□ 1.6
CPNE1-216ENST00000437340 ANO7Q6IWH7 933 aa25.03■■□□□ 1.6
CPNE1-216ENST00000437340 NUDT18Q6ZVK8 323 aa25.03■■□□□ 1.6
CPNE1-216ENST00000437340 MMAAQ8IVH4 418 aaKnown RBP25.03■■□□□ 1.6
CPNE1-216ENST00000437340 SELENOMQ8WWX9 145 aa25.03■■□□□ 1.6
CPNE1-216ENST00000437340 PYCR2Q96C36 320 aa25.03■■□□□ 1.6
CPNE1-216ENST00000437340 ACPTQ9BZG2 426 aa25.03■■□□□ 1.6
CPNE1-216ENST00000437340 AQP12BA6NM10 295 aa25.02■■□□□ 1.6
CPNE1-216ENST00000437340 PDYNP01213 254 aa25.02■■□□□ 1.6
CPNE1-216ENST00000437340 SLC7A1P30825 629 aa25.02■■□□□ 1.6
CPNE1-216ENST00000437340 EEFSECP57772 596 aaKnown RBP25.02■■□□□ 1.6
CPNE1-216ENST00000437340 KIAA0040Q15053 153 aa25.02■■□□□ 1.6
CPNE1-216ENST00000437340 LRRC36Q1X8D7 754 aa25.02■■□□□ 1.6
CPNE1-216ENST00000437340 SGO1Q5FBB7 561 aa25.02■■□□□ 1.6
CPNE1-216ENST00000437340 LIPJQ5W064 366 aa25.02■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms