RNA–Protein interactions for RNA: ENST00000437048.6

VPS53-204, Transcript of VPS53, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS53, Length 13,106 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS53-204ENST00000437048 GBA3Q9H227 469 aa7.07□□□□□ -1.28
VPS53-204ENST00000437048 ALG9Q9H6U8 611 aa7.07□□□□□ -1.28
VPS53-204ENST00000437048 HPF1Q9NWY4 346 aa7.07□□□□□ -1.28
VPS53-204ENST00000437048 SRRDQ9UH36 339 aa7.07□□□□□ -1.28
VPS53-204ENST00000437048 DOPEY2Q9Y3R5 2298 aa7.07□□□□□ -1.28
VPS53-204ENST00000437048 RASAL1O95294 804 aa7.07□□□□□ -1.28
VPS53-204ENST00000437048 SLC1A5Q15758 541 aa7.07□□□□□ -1.28
VPS53-204ENST00000437048 BCL2A1Q16548 175 aa7.07□□□□□ -1.28
VPS53-204ENST00000437048 C1orf186Q6ZWK4 172 aa7.07□□□□□ -1.28
VPS53-204ENST00000437048 FAM46DQ8NEK8 389 aa7.07□□□□□ -1.28
VPS53-204ENST00000437048 AZIN2Q96A70 460 aa7.07□□□□□ -1.28
VPS53-204ENST00000437048 SPIN2AQ99865 258 aa7.07□□□□□ -1.28
VPS53-204ENST00000437048 SPIN2BQ9BPZ2 258 aa7.07□□□□□ -1.28
VPS53-204ENST00000437048 ZNF436Q9C0F3 470 aaPredicted RBP7.07□□□□□ -1.28
VPS53-204ENST00000437048 KDM6BO15054 1643 aa7.06□□□□□ -1.28
VPS53-204ENST00000437048 MEGF11A6BM72 1044 aa7.06□□□□□ -1.28
VPS53-204ENST00000437048 SHOXO15266 292 aa7.06□□□□□ -1.28
VPS53-204ENST00000437048 CLDN11O75508 207 aa7.06□□□□□ -1.28
VPS53-204ENST00000437048 CRYZL1O95825 349 aa7.06□□□□□ -1.28
VPS53-204ENST00000437048 IGFALSP35858 605 aa7.06□□□□□ -1.28
VPS53-204ENST00000437048 OGDHQ02218 1023 aa7.06□□□□□ -1.28
VPS53-204ENST00000437048 ZNF630Q2M218 657 aaPredicted RBP7.06□□□□□ -1.28
VPS53-204ENST00000437048 HDAC10Q969S8 669 aa7.06□□□□□ -1.28
VPS53-204ENST00000437048 ZNF597Q96LX8 424 aa7.06□□□□□ -1.28
VPS53-204ENST00000437048 FBXO6Q9NRD1 293 aaPredicted RBP7.06□□□□□ -1.28
VPS53-204ENST00000437048 PAHP00439 452 aa7.06□□□□□ -1.28
VPS53-204ENST00000437048 SBK2P0C263 348 aa7.06□□□□□ -1.28
VPS53-204ENST00000437048 CRISP3P54108 245 aa7.06□□□□□ -1.28
VPS53-204ENST00000437048 PPP2R2BQ00005 443 aa7.06□□□□□ -1.28
VPS53-204ENST00000437048 GPR33Q49SQ1 333 aa7.06□□□□□ -1.28
VPS53-204ENST00000437048 NADK2Q4G0N4 442 aa7.06□□□□□ -1.28
VPS53-204ENST00000437048 LRRC57Q8N9N7 239 aa7.06□□□□□ -1.28
VPS53-204ENST00000437048 ZNF527Q8NB42 609 aa7.06□□□□□ -1.28
VPS53-204ENST00000437048 OR8K5Q8NH50 307 aa7.06□□□□□ -1.28
VPS53-204ENST00000437048 COPS5Q92905 334 aa7.06□□□□□ -1.28
VPS53-204ENST00000437048 ACOT13Q9NPJ3 140 aa7.06□□□□□ -1.28
VPS53-204ENST00000437048 PCYT1BQ9Y5K3 369 aaPredicted RBP7.06□□□□□ -1.28
VPS53-204ENST00000437048 OR2AG2A6NM03 316 aa7.06□□□□□ -1.28
VPS53-204ENST00000437048 FAM25EA8MYX2 175 aa7.06□□□□□ -1.28
VPS53-204ENST00000437048 HLA-DQA2P01906 255 aa7.06□□□□□ -1.28
VPS53-204ENST00000437048 KLK7P49862 253 aa7.06□□□□□ -1.28
VPS53-204ENST00000437048 ARPP19P56211 112 aa7.06□□□□□ -1.28
VPS53-204ENST00000437048 VN1R5Q7Z5H4 357 aa7.06□□□□□ -1.28
VPS53-204ENST00000437048 FLRT1Q9NZU1 646 aa7.06□□□□□ -1.28
VPS53-204ENST00000437048 FKBP7Q9Y680 259 aa7.06□□□□□ -1.28
VPS53-204ENST00000437048 SALL3Q9BXA9 1300 aa7.06□□□□□ -1.28
VPS53-204ENST00000437048 CYP3A5P20815 502 aa7.06□□□□□ -1.28
VPS53-204ENST00000437048 EN1Q05925 392 aaPredicted RBP7.06□□□□□ -1.28
VPS53-204ENST00000437048 SEMA5AQ13591 1074 aa7.06□□□□□ -1.28
VPS53-204ENST00000437048 ABRAXAS2Q15018 415 aa7.06□□□□□ -1.28
VPS53-204ENST00000437048 HSDL2Q6YN16 418 aa7.06□□□□□ -1.28
VPS53-204ENST00000437048 RALGPS2Q86X27 583 aaPredicted RBP7.06□□□□□ -1.28
VPS53-204ENST00000437048 DNAJC1Q96KC8 554 aaKnown RBP7.06□□□□□ -1.28
VPS53-204ENST00000437048 PORCNQ9H237 461 aa7.06□□□□□ -1.28
VPS53-204ENST00000437048 ADGRB1O14514 1584 aa7.06□□□□□ -1.28
VPS53-204ENST00000437048 PCP4L1A6NKN8 68 aa7.06□□□□□ -1.28
VPS53-204ENST00000437048 CXCR6O00574 342 aa7.06□□□□□ -1.28
VPS53-204ENST00000437048 P2RX6O15547 441 aa7.06□□□□□ -1.28
VPS53-204ENST00000437048 RPP40O75818 363 aaKnown RBP7.06□□□□□ -1.28
VPS53-204ENST00000437048 KDM4BO94953 1096 aa7.06□□□□□ -1.28
VPS53-204ENST00000437048 HLA-EP13747 358 aa7.06□□□□□ -1.28
VPS53-204ENST00000437048 SEPHS1P49903 392 aa7.06□□□□□ -1.28
VPS53-204ENST00000437048 ATP6AP1Q15904 470 aa7.06□□□□□ -1.28
VPS53-204ENST00000437048 FAM180AQ6UWF9 173 aa7.06□□□□□ -1.28
VPS53-204ENST00000437048 DNAJC22Q8N4W6 341 aa7.06□□□□□ -1.28
VPS53-204ENST00000437048 BRSK1Q8TDC3 778 aa7.06□□□□□ -1.28
VPS53-204ENST00000437048 ZDHHC7Q9NXF8 308 aa7.06□□□□□ -1.28
VPS53-204ENST00000437048 ACADMP11310 421 aa7.06□□□□□ -1.28
VPS53-204ENST00000437048 CETPP11597 493 aa7.06□□□□□ -1.28
VPS53-204ENST00000437048 CDKN2CP42773 168 aa7.06□□□□□ -1.28
VPS53-204ENST00000437048 ZDHHC21Q8IVQ6 265 aa7.06□□□□□ -1.28
VPS53-204ENST00000437048 MED8Q96G25 268 aa7.06□□□□□ -1.28
VPS53-204ENST00000437048 DPYSL5Q9BPU6 564 aa7.06□□□□□ -1.28
VPS53-204ENST00000437048 POLR2J3Q9H1A7 115 aaKnown RBP7.06□□□□□ -1.28
VPS53-204ENST00000437048 FAM83DQ9H4H8 585 aa7.06□□□□□ -1.28
VPS53-204ENST00000437048 GFOD1Q9NXC2 390 aa7.06□□□□□ -1.28
VPS53-204ENST00000437048 CMAHPQ9Y471 501 aa7.06□□□□□ -1.28
VPS53-204ENST00000437048 INMT-MINDY4F8WBC2 141 aa7.06□□□□□ -1.28
VPS53-204ENST00000437048 B3GAT3O94766 335 aa7.06□□□□□ -1.28
VPS53-204ENST00000437048 GIMD1P0DJR0 217 aa7.06□□□□□ -1.28
VPS53-204ENST00000437048 PRDX5P30044 214 aa7.06□□□□□ -1.28
VPS53-204ENST00000437048 CACNB3P54284 484 aa7.06□□□□□ -1.28
VPS53-204ENST00000437048 LRRC66Q68CR7 880 aa7.06□□□□□ -1.28
VPS53-204ENST00000437048 TMPRSS11BQ86T26 416 aa7.06□□□□□ -1.28
VPS53-204ENST00000437048 SATL1Q86VE3 508 aa7.06□□□□□ -1.28
VPS53-204ENST00000437048 ADAMTS15Q8TE58 950 aa7.06□□□□□ -1.28
VPS53-204ENST00000437048 ADAM2Q99965 735 aa7.06□□□□□ -1.28
VPS53-204ENST00000437048 MCMBPQ9BTE3 642 aa7.06□□□□□ -1.28
VPS53-204ENST00000437048 SLC25A51Q9H1U9 297 aa7.06□□□□□ -1.28
VPS53-204ENST00000437048 OXSMQ9NWU1 459 aa7.06□□□□□ -1.28
VPS53-204ENST00000437048 C17orf102A2RUQ5 167 aa7.06□□□□□ -1.28
VPS53-204ENST00000437048 GNALP38405 381 aa7.06□□□□□ -1.28
VPS53-204ENST00000437048 CDH11P55287 796 aa7.06□□□□□ -1.28
VPS53-204ENST00000437048 STXBP1P61764 594 aaKnown RBP7.06□□□□□ -1.28
VPS53-204ENST00000437048 SGCGQ13326 291 aa7.06□□□□□ -1.28
VPS53-204ENST00000437048 RSU1Q15404 277 aa7.06□□□□□ -1.28
VPS53-204ENST00000437048 EXOC3L2Q2M3D2 409 aa7.06□□□□□ -1.28
VPS53-204ENST00000437048 ANKRD23Q86SG2 305 aa7.06□□□□□ -1.28
VPS53-204ENST00000437048 RNF180Q86T96 592 aa7.06□□□□□ -1.28
VPS53-204ENST00000437048 OR52K1Q8NGK4 314 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms