RNA–Protein interactions for RNA: ENST00000437003.3

TMEM116-202, Transcript of transmembrane protein 116, humanhuman

Gene TMEM116, Length 2,761 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-202ENST00000437003 CDYL2Q8N8U2 506 aa12.13□□□□□ -0.47
TMEM116-202ENST00000437003 SMIM14Q96QK8 99 aa12.13□□□□□ -0.47
TMEM116-202ENST00000437003 REXO4Q9GZR2 422 aaKnown RBP12.13□□□□□ -0.47
TMEM116-202ENST00000437003 FBXO44Q9H4M3 255 aa12.13□□□□□ -0.47
TMEM116-202ENST00000437003 PRDM5Q9NQX1 630 aaPredicted RBP12.13□□□□□ -0.47
TMEM116-202ENST00000437003 RASSF1Q9NS23 344 aa12.13□□□□□ -0.47
TMEM116-202ENST00000437003 VAPAQ9P0L0 249 aa12.13□□□□□ -0.47
TMEM116-202ENST00000437003 OPTCQ9UBM4 332 aa12.13□□□□□ -0.47
TMEM116-202ENST00000437003 RNF112Q9ULX5 631 aa12.13□□□□□ -0.47
TMEM116-202ENST00000437003 FAM234BA2RU67 622 aa12.12□□□□□ -0.47
TMEM116-202ENST00000437003 M0QX08 132 aa12.12□□□□□ -0.47
TMEM116-202ENST00000437003 RAMP2O60895 175 aa12.12□□□□□ -0.47
TMEM116-202ENST00000437003 ATXN1LP0C7T5 689 aaKnown RBP12.12□□□□□ -0.47
TMEM116-202ENST00000437003 TSPAN7P41732 249 aa12.12□□□□□ -0.47
TMEM116-202ENST00000437003 TRAF3Q13114 568 aa12.12□□□□□ -0.47
TMEM116-202ENST00000437003 E2F2Q14209 437 aa12.12□□□□□ -0.47
TMEM116-202ENST00000437003 ZNF235Q14590 738 aa12.12□□□□□ -0.47
TMEM116-202ENST00000437003 KCNA10Q16322 511 aa12.12□□□□□ -0.47
TMEM116-202ENST00000437003 ZNF404Q494X3 552 aa12.12□□□□□ -0.47
TMEM116-202ENST00000437003 GLB1LQ6UWU2 654 aa12.12□□□□□ -0.47
TMEM116-202ENST00000437003 NECAB2Q7Z6G3 386 aa12.12□□□□□ -0.47
TMEM116-202ENST00000437003 RASAL3Q86YV0 1011 aa12.12□□□□□ -0.47
TMEM116-202ENST00000437003 IFNL1Q8IU54 200 aa12.12□□□□□ -0.47
TMEM116-202ENST00000437003 METTL4Q8N3J2 472 aa12.12□□□□□ -0.47
TMEM116-202ENST00000437003 ARRDC2Q8TBH0 407 aa12.12□□□□□ -0.47
TMEM116-202ENST00000437003 TSPEARQ8WU66 669 aa12.12□□□□□ -0.47
TMEM116-202ENST00000437003 UBE2FQ969M7 185 aa12.12□□□□□ -0.47
TMEM116-202ENST00000437003 ZNF583Q96ND8 569 aa12.12□□□□□ -0.47
TMEM116-202ENST00000437003 ATOH8Q96SQ7 321 aa12.12□□□□□ -0.47
TMEM116-202ENST00000437003 BARD1Q99728 777 aaKnown RBP12.12□□□□□ -0.47
TMEM116-202ENST00000437003 IKZF5Q9H5V7 419 aa12.12□□□□□ -0.47
TMEM116-202ENST00000437003 KAT8Q9H7Z6 458 aaKnown RBP12.12□□□□□ -0.47
TMEM116-202ENST00000437003 RRAGCQ9HB90 399 aa12.12□□□□□ -0.47
TMEM116-202ENST00000437003 TMEM248Q9NWD8 314 aa12.12□□□□□ -0.47
TMEM116-202ENST00000437003 TMEFF2Q9UIK5 374 aaPredicted RBP12.12□□□□□ -0.47
TMEM116-202ENST00000437003 ZNF225Q9UK10 706 aa12.12□□□□□ -0.47
TMEM116-202ENST00000437003 IKZF3Q9UKT9 509 aa12.12□□□□□ -0.47
TMEM116-202ENST00000437003 GPSM3Q9Y4H4 160 aa12.12□□□□□ -0.47
TMEM116-202ENST00000437003 HTTP42858 3142 aa12.12□□□□□ -0.47
TMEM116-202ENST00000437003 PATJQ8NI35 1801 aa12.12□□□□□ -0.47
TMEM116-202ENST00000437003 PRSS47A8MTI9 375 aa12.12□□□□□ -0.47
TMEM116-202ENST00000437003 RHOBTB1O94844 696 aa12.12□□□□□ -0.47
TMEM116-202ENST00000437003 PAPSS2O95340 614 aaPredicted RBP12.12□□□□□ -0.47
TMEM116-202ENST00000437003 WISP3O95389 354 aaPredicted RBP12.12□□□□□ -0.47
TMEM116-202ENST00000437003 NTRK1P04629 796 aa12.12□□□□□ -0.47
TMEM116-202ENST00000437003 GGT5P36269 586 aa12.12□□□□□ -0.47
TMEM116-202ENST00000437003 OR1G1P47890 313 aa12.12□□□□□ -0.47
TMEM116-202ENST00000437003 TSNQ15631 228 aaKnown RBP12.12□□□□□ -0.47
TMEM116-202ENST00000437003 C6orf136Q5SQH8 315 aa12.12□□□□□ -0.47
TMEM116-202ENST00000437003 ANKS6Q68DC2 871 aa12.12□□□□□ -0.47
TMEM116-202ENST00000437003 CES5AQ6NT32 575 aa12.12□□□□□ -0.47
TMEM116-202ENST00000437003 MRNIPQ6NTE8 343 aa12.12□□□□□ -0.47
TMEM116-202ENST00000437003 PAQR3Q6TCH7 311 aa12.12□□□□□ -0.47
TMEM116-202ENST00000437003 ZFAND4Q86XD8 727 aa12.12□□□□□ -0.47
TMEM116-202ENST00000437003 LACC1Q8IV20 430 aa12.12□□□□□ -0.47
TMEM116-202ENST00000437003 NLGN4XQ8N0W4 816 aa12.12□□□□□ -0.47
TMEM116-202ENST00000437003 SIX5Q8N196 739 aa12.12□□□□□ -0.47
TMEM116-202ENST00000437003 ATAD1Q8NBU5 361 aa12.12□□□□□ -0.47
TMEM116-202ENST00000437003 OR7G1Q8NGA0 311 aa12.12□□□□□ -0.47
TMEM116-202ENST00000437003 MYEOVQ96EZ4 313 aa12.12□□□□□ -0.47
TMEM116-202ENST00000437003 YME1L1Q96TA2 773 aa12.12□□□□□ -0.47
TMEM116-202ENST00000437003 CATSPERZQ9NTU4 200 aa12.12□□□□□ -0.47
TMEM116-202ENST00000437003 TRMT13Q9NUP7 481 aaKnown RBP12.12□□□□□ -0.47
TMEM116-202ENST00000437003 ADPRHL2Q9NX46 363 aa12.12□□□□□ -0.47
TMEM116-202ENST00000437003 GALPQ9UBC7 116 aa12.12□□□□□ -0.47
TMEM116-202ENST00000437003 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.12□□□□□ -0.47
TMEM116-202ENST00000437003 OSGIN1Q9UJX0 560 aa12.12□□□□□ -0.47
TMEM116-202ENST00000437003 PRELID1Q9Y255 219 aa12.12□□□□□ -0.47
TMEM116-202ENST00000437003 A0A0B4J203 849 aa12.11□□□□□ -0.47
TMEM116-202ENST00000437003 ISPDA4D126 451 aa12.11□□□□□ -0.47
TMEM116-202ENST00000437003 AGAP5A6NIR3 686 aa12.11□□□□□ -0.47
TMEM116-202ENST00000437003 AGRPO00253 132 aa12.11□□□□□ -0.47
TMEM116-202ENST00000437003 FAM20BO75063 409 aa12.11□□□□□ -0.47
TMEM116-202ENST00000437003 VPS4BO75351 444 aa12.11□□□□□ -0.47
TMEM116-202ENST00000437003 G6PDP11413 515 aa12.11□□□□□ -0.47
TMEM116-202ENST00000437003 FDXRP22570 491 aa12.11□□□□□ -0.47
TMEM116-202ENST00000437003 ERVK-8P63133 956 aa12.11□□□□□ -0.47
TMEM116-202ENST00000437003 SLC35A2P78381 396 aa12.11□□□□□ -0.47
TMEM116-202ENST00000437003 TIAL1Q01085 375 aaKnown RBP eCLIP12.11□□□□□ -0.47
TMEM116-202ENST00000437003 CRHR2Q13324 411 aa12.11□□□□□ -0.47
TMEM116-202ENST00000437003 NFE2Q16621 373 aaPredicted RBP12.11□□□□□ -0.47
TMEM116-202ENST00000437003 CCDC58Q4VC31 144 aa12.11□□□□□ -0.47
TMEM116-202ENST00000437003 C10orf120Q5SQS8 335 aa12.11□□□□□ -0.47
TMEM116-202ENST00000437003 SYT6Q5T7P8 510 aaPredicted RBP12.11□□□□□ -0.47
TMEM116-202ENST00000437003 FIP1L1Q6UN15 594 aaKnown RBP12.11□□□□□ -0.47
TMEM116-202ENST00000437003 AHSA2Q719I0 299 aa12.11□□□□□ -0.47
TMEM116-202ENST00000437003 GDPD3Q7L5L3 318 aa12.11□□□□□ -0.47
TMEM116-202ENST00000437003 ZNF598Q86UK7 904 aaKnown RBP12.11□□□□□ -0.47
TMEM116-202ENST00000437003 ZNF683Q8IZ20 524 aa12.11□□□□□ -0.47
TMEM116-202ENST00000437003 KLHDC9Q8NEP7 349 aa12.11□□□□□ -0.47
TMEM116-202ENST00000437003 NELL1Q92832 810 aa12.11□□□□□ -0.47
TMEM116-202ENST00000437003 CYP2S1Q96SQ9 504 aa12.11□□□□□ -0.47
TMEM116-202ENST00000437003 ACOT13Q9NPJ3 140 aa12.11□□□□□ -0.47
TMEM116-202ENST00000437003 SCN3BQ9NY72 215 aa12.11□□□□□ -0.47
TMEM116-202ENST00000437003 ZNF221Q9UK13 617 aa12.11□□□□□ -0.47
TMEM116-202ENST00000437003 TPRKBQ9Y3C4 175 aa12.11□□□□□ -0.47
TMEM116-202ENST00000437003 DOCK4Q8N1I0 1966 aa12.11□□□□□ -0.47
TMEM116-202ENST00000437003 TBKBP1A7MCY6 615 aa12.11□□□□□ -0.47
TMEM116-202ENST00000437003 PDZK1P1A8MUH7 402 aa12.11□□□□□ -0.47
TMEM116-202ENST00000437003 CDC7O00311 574 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms