RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 RTCAO00442 366 aaKnown RBP11□□□□□ -0.65
SCN4A-201ENST00000435607 GJB6O95452 261 aa11□□□□□ -0.65
SCN4A-201ENST00000435607 CSNK2A2P19784 350 aaPredicted RBP11□□□□□ -0.65
SCN4A-201ENST00000435607 RPL10P27635 214 aaKnown RBP11□□□□□ -0.65
SCN4A-201ENST00000435607 TYSND1Q2T9J0 566 aa11□□□□□ -0.65
SCN4A-201ENST00000435607 FAM163AQ96GL9 167 aaPredicted RBP11□□□□□ -0.65
SCN4A-201ENST00000435607 TPK1Q9H3S4 243 aa11□□□□□ -0.65
SCN4A-201ENST00000435607 NOL11Q9H8H0 719 aaKnown RBP11□□□□□ -0.65
SCN4A-201ENST00000435607 ADAP2Q9NPF8 381 aa11□□□□□ -0.65
SCN4A-201ENST00000435607 GLTPD2A6NH11 291 aa10.99□□□□□ -0.65
SCN4A-201ENST00000435607 MAGEB17A8MXT2 336 aa10.99□□□□□ -0.65
SCN4A-201ENST00000435607 PLSCR1O15162 318 aa10.99□□□□□ -0.65
SCN4A-201ENST00000435607 MSI1O43347 362 aaKnown RBP10.99□□□□□ -0.65
SCN4A-201ENST00000435607 ENTPD1P49961 510 aa10.99□□□□□ -0.65
SCN4A-201ENST00000435607 PLEKHG4Q58EX7 1191 aa10.99□□□□□ -0.65
SCN4A-201ENST00000435607 NUDT13Q86X67 352 aa10.99□□□□□ -0.65
SCN4A-201ENST00000435607 SLITRK4Q8IW52 837 aa10.99□□□□□ -0.65
SCN4A-201ENST00000435607 FAM86B1Q8N7N1 296 aa10.99□□□□□ -0.65
SCN4A-201ENST00000435607 MKL1Q969V6 931 aa10.99□□□□□ -0.65
SCN4A-201ENST00000435607 PDE7BQ9NP56 450 aa10.99□□□□□ -0.65
SCN4A-201ENST00000435607 IRS2Q9Y4H2 1338 aa10.99□□□□□ -0.65
SCN4A-201ENST00000435607 OR2AT4A6NND4 320 aa10.99□□□□□ -0.65
SCN4A-201ENST00000435607 B8ZZF3 427 aa10.99□□□□□ -0.65
SCN4A-201ENST00000435607 HOXB2P14652 356 aa10.99□□□□□ -0.65
SCN4A-201ENST00000435607 CD44P16070 742 aaKnown RBP10.99□□□□□ -0.65
SCN4A-201ENST00000435607 SCN1BQ07699 218 aa10.99□□□□□ -0.65
SCN4A-201ENST00000435607 ADAD1Q96M93 576 aaKnown RBP10.99□□□□□ -0.65
SCN4A-201ENST00000435607 MRPL45Q9BRJ2 306 aaKnown RBP10.99□□□□□ -0.65
SCN4A-201ENST00000435607 GBA3Q9H227 469 aa10.99□□□□□ -0.65
SCN4A-201ENST00000435607 IQGAP3Q86VI3 1631 aa10.99□□□□□ -0.65
SCN4A-201ENST00000435607 CLRN1P58418 232 aa10.99□□□□□ -0.65
SCN4A-201ENST00000435607 APOBEC3HQ6NTF7 200 aaKnown RBP10.99□□□□□ -0.65
SCN4A-201ENST00000435607 KCTD13Q8WZ19 329 aa10.99□□□□□ -0.65
SCN4A-201ENST00000435607 SLC25A51Q9H1U9 297 aa10.99□□□□□ -0.65
SCN4A-201ENST00000435607 DZANK1Q9NVP4 752 aa10.99□□□□□ -0.65
SCN4A-201ENST00000435607 ATP6AP2O75787 350 aa10.99□□□□□ -0.65
SCN4A-201ENST00000435607 CARD16Q5EG05 197 aa10.99□□□□□ -0.65
SCN4A-201ENST00000435607 GLYATQ6IB77 296 aa10.99□□□□□ -0.65
SCN4A-201ENST00000435607 CNKSR3Q6P9H4 555 aa10.99□□□□□ -0.65
SCN4A-201ENST00000435607 HORMAD2Q8N7B1 307 aa10.99□□□□□ -0.65
SCN4A-201ENST00000435607 P2RY11Q96G91 374 aa10.99□□□□□ -0.65
SCN4A-201ENST00000435607 ZNF570Q96NI8 536 aa10.99□□□□□ -0.65
SCN4A-201ENST00000435607 ZSCAN5AQ9BUG6 496 aa10.99□□□□□ -0.65
SCN4A-201ENST00000435607 TMEM168Q9H0V1 697 aa10.99□□□□□ -0.65
SCN4A-201ENST00000435607 SPATA7Q9P0W8 599 aa10.99□□□□□ -0.65
SCN4A-201ENST00000435607 EGFL7Q9UHF1 273 aa10.99□□□□□ -0.65
SCN4A-201ENST00000435607 CYTH4Q9UIA0 394 aa10.99□□□□□ -0.65
SCN4A-201ENST00000435607 SLC7A11Q9UPY5 501 aa10.99□□□□□ -0.65
SCN4A-201ENST00000435607 U3KQV3 271 aa10.99□□□□□ -0.65
SCN4A-201ENST00000435607 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.99□□□□□ -0.65
SCN4A-201ENST00000435607 IQCF5A8MTL0 148 aa10.99□□□□□ -0.65
SCN4A-201ENST00000435607 ADH1BP00325 375 aa10.99□□□□□ -0.65
SCN4A-201ENST00000435607 ZNF8P17098 575 aaPredicted RBP10.99□□□□□ -0.65
SCN4A-201ENST00000435607 AP2S1P53680 142 aaPredicted RBP10.99□□□□□ -0.65
SCN4A-201ENST00000435607 IL10RBQ08334 325 aa10.99□□□□□ -0.65
SCN4A-201ENST00000435607 IFI44LQ53G44 452 aa10.99□□□□□ -0.65
SCN4A-201ENST00000435607 LINGO4Q6UY18 593 aa10.99□□□□□ -0.65
SCN4A-201ENST00000435607 C6orf120Q7Z4R8 191 aa10.99□□□□□ -0.65
SCN4A-201ENST00000435607 SPERTQ8NA61 448 aa10.99□□□□□ -0.65
SCN4A-201ENST00000435607 GLB1L3Q8NCI6 653 aaPredicted RBP10.99□□□□□ -0.65
SCN4A-201ENST00000435607 SLC22A8Q8TCC7 542 aa10.99□□□□□ -0.65
SCN4A-201ENST00000435607 TMEM234Q8WY98 164 aa10.99□□□□□ -0.65
SCN4A-201ENST00000435607 ZBTB10Q96DT7 871 aa10.99□□□□□ -0.65
SCN4A-201ENST00000435607 MARCH7Q9H992 704 aa10.99□□□□□ -0.65
SCN4A-201ENST00000435607 NPIPA2E9PIF3 369 aa10.99□□□□□ -0.65
SCN4A-201ENST00000435607 NPIPA3F8WFD2 350 aa10.99□□□□□ -0.65
SCN4A-201ENST00000435607 MATN2O00339 956 aa10.99□□□□□ -0.65
SCN4A-201ENST00000435607 AHSA1O95433 338 aa10.99□□□□□ -0.65
SCN4A-201ENST00000435607 ESR1P03372 595 aa10.99□□□□□ -0.65
SCN4A-201ENST00000435607 SRPRAP08240 638 aaKnown RBP10.99□□□□□ -0.65
SCN4A-201ENST00000435607 MAGEA12P43365 314 aa10.99□□□□□ -0.65
SCN4A-201ENST00000435607 ELOCQ15369 112 aa10.99□□□□□ -0.65
SCN4A-201ENST00000435607 DPY19L1Q2PZI1 675 aa10.99□□□□□ -0.65
SCN4A-201ENST00000435607 GDPD4Q6W3E5 623 aa10.99□□□□□ -0.65
SCN4A-201ENST00000435607 CLEC17AQ6ZS10 378 aa10.99□□□□□ -0.65
SCN4A-201ENST00000435607 BBS12Q6ZW61 710 aa10.99□□□□□ -0.65
SCN4A-201ENST00000435607 RAB43Q86YS6 212 aa10.99□□□□□ -0.65
SCN4A-201ENST00000435607 LAS2Q8IYD9 372 aa10.99□□□□□ -0.65
SCN4A-201ENST00000435607 MINDY2Q8NBR6 621 aa10.99□□□□□ -0.65
SCN4A-201ENST00000435607 KLHDC7BQ96G42 594 aa10.99□□□□□ -0.65
SCN4A-201ENST00000435607 GPR21Q99679 349 aa10.99□□□□□ -0.65
SCN4A-201ENST00000435607 CCDC28BQ9BUN5 200 aa10.99□□□□□ -0.65
SCN4A-201ENST00000435607 P2RX2Q9UBL9 471 aa10.99□□□□□ -0.65
SCN4A-201ENST00000435607 UBIAD1Q9Y5Z9 338 aa10.99□□□□□ -0.65
SCN4A-201ENST00000435607 FTCDNL1E5RQL4 147 aa10.98□□□□□ -0.65
SCN4A-201ENST00000435607 ATF6P18850 670 aa10.98□□□□□ -0.65
SCN4A-201ENST00000435607 DLG2Q15700 870 aa10.98□□□□□ -0.65
SCN4A-201ENST00000435607 KCTD21Q4G0X4 260 aa10.98□□□□□ -0.65
SCN4A-201ENST00000435607 GALNT5Q7Z7M9 940 aa10.98□□□□□ -0.65
SCN4A-201ENST00000435607 NXPE1Q8N323 547 aa10.98□□□□□ -0.65
SCN4A-201ENST00000435607 GSTCDQ8NEC7 633 aa10.98□□□□□ -0.65
SCN4A-201ENST00000435607 LRRC20Q8TCA0 184 aa10.98□□□□□ -0.65
SCN4A-201ENST00000435607 EPS8L1Q8TE68 723 aa10.98□□□□□ -0.65
SCN4A-201ENST00000435607 ALG5Q9Y673 324 aa10.98□□□□□ -0.65
SCN4A-201ENST00000435607 CLPXO76031 633 aa10.98□□□□□ -0.65
SCN4A-201ENST00000435607 CTDNEP1O95476 244 aa10.98□□□□□ -0.65
SCN4A-201ENST00000435607 ADRA1BP35368 520 aa10.98□□□□□ -0.65
SCN4A-201ENST00000435607 HSPA7P48741 367 aa10.98□□□□□ -0.65
SCN4A-201ENST00000435607 TAF1AQ15573 450 aaPredicted RBP10.98□□□□□ -0.65
SCN4A-201ENST00000435607 PERM1Q5SV97 790 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms