RNA–Protein interactions for RNA: ENST00000434795.5

CPNE1-213, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-213ENST00000434795 C19orf47Q8N9M1 422 aaKnown RBP17.25■□□□□ 0.35
CPNE1-213ENST00000434795 LMNTD1Q8N9Z9 388 aa17.25■□□□□ 0.35
CPNE1-213ENST00000434795 LINC01555Q8NAE3 123 aa17.25■□□□□ 0.35
CPNE1-213ENST00000434795 CFAP61Q8NHU2 1237 aa17.25■□□□□ 0.35
CPNE1-213ENST00000434795 ADAMTS17Q8TE56 1095 aa17.25■□□□□ 0.35
CPNE1-213ENST00000434795 MFSD3Q96ES6 412 aa17.25■□□□□ 0.35
CPNE1-213ENST00000434795 TRIM55Q9BYV6 548 aa17.25■□□□□ 0.35
CPNE1-213ENST00000434795 MRM3Q9HC36 420 aaKnown RBP17.25■□□□□ 0.35
CPNE1-213ENST00000434795 SYBUQ9NX95 663 aa17.25■□□□□ 0.35
CPNE1-213ENST00000434795 MAN2B2Q9Y2E5 1009 aa17.25■□□□□ 0.35
CPNE1-213ENST00000434795 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.24■□□□□ 0.35
CPNE1-213ENST00000434795 A0A0J9YY10 115 aa17.24■□□□□ 0.35
CPNE1-213ENST00000434795 ISM1B1AKI9 464 aa17.24■□□□□ 0.35
CPNE1-213ENST00000434795 AVILO75366 819 aa17.24■□□□□ 0.35
CPNE1-213ENST00000434795 NDUFS3O75489 264 aa17.24■□□□□ 0.35
CPNE1-213ENST00000434795 VAPBO95292 243 aa17.24■□□□□ 0.35
CPNE1-213ENST00000434795 CTSBP07858 339 aa17.24■□□□□ 0.35
CPNE1-213ENST00000434795 RPS3P23396 243 aaKnown RBP eCLIP17.24■□□□□ 0.355e-8■■■□□ 18.1
CPNE1-213ENST00000434795 CASRP41180 1078 aa17.24■□□□□ 0.35
CPNE1-213ENST00000434795 RAB28P51157 221 aa17.24■□□□□ 0.35
CPNE1-213ENST00000434795 KCNJ11Q14654 390 aa17.24■□□□□ 0.35
CPNE1-213ENST00000434795 SLC5A12Q1EHB4 618 aa17.24■□□□□ 0.35
CPNE1-213ENST00000434795 FAM69BQ5VUD6 431 aa17.24■□□□□ 0.35
CPNE1-213ENST00000434795 PTRHD1Q6GMV3 140 aaKnown RBP17.24■□□□□ 0.35
CPNE1-213ENST00000434795 TTC27Q6P3X3 843 aa17.24■□□□□ 0.35
CPNE1-213ENST00000434795 UNC5DQ6UXZ4 953 aa17.24■□□□□ 0.35
CPNE1-213ENST00000434795 LRRC6Q86X45 466 aa17.24■□□□□ 0.35
CPNE1-213ENST00000434795 SYTL1Q8IYJ3 562 aa17.24■□□□□ 0.35
CPNE1-213ENST00000434795 MPP5Q8N3R9 675 aa17.24■□□□□ 0.35
CPNE1-213ENST00000434795 ENDOVQ8N8Q3 282 aaKnown RBP17.24■□□□□ 0.35
CPNE1-213ENST00000434795 MS4A14Q96JA4 679 aa17.24■□□□□ 0.35
CPNE1-213ENST00000434795 BIRC8Q96P09 236 aa17.24■□□□□ 0.35
CPNE1-213ENST00000434795 DPH2Q9BQC3 489 aaPredicted RBP17.24■□□□□ 0.35
CPNE1-213ENST00000434795 TCFL5Q9UL49 500 aa17.24■□□□□ 0.35
CPNE1-213ENST00000434795 TTC7AQ9ULT0 858 aaPredicted RBP17.24■□□□□ 0.35
CPNE1-213ENST00000434795 SOX13Q9UN79 622 aa17.24■□□□□ 0.35
CPNE1-213ENST00000434795 TP53TG5Q9Y2B4 290 aa17.24■□□□□ 0.35
CPNE1-213ENST00000434795 JRKLQ9Y4A0 524 aa17.24■□□□□ 0.35
CPNE1-213ENST00000434795 KDM1AO60341 852 aa17.23■□□□□ 0.35
CPNE1-213ENST00000434795 RFPL1O75677 317 aa17.23■□□□□ 0.35
CPNE1-213ENST00000434795 DNAJB5O75953 348 aa17.23■□□□□ 0.35
CPNE1-213ENST00000434795 HBQ1P09105 142 aa17.23■□□□□ 0.35
CPNE1-213ENST00000434795 NR1D1P20393 614 aa17.23■□□□□ 0.35
CPNE1-213ENST00000434795 CD9P21926 228 aa17.23■□□□□ 0.35
CPNE1-213ENST00000434795 PKLRP30613 574 aa17.23■□□□□ 0.35
CPNE1-213ENST00000434795 PTCHD3Q3KNS1 767 aa17.23■□□□□ 0.35
CPNE1-213ENST00000434795 SDCCAG8Q86SQ7 713 aaPredicted RBP17.23■□□□□ 0.35
CPNE1-213ENST00000434795 CAND1Q86VP6 1230 aaKnown RBP17.23■□□□□ 0.35
CPNE1-213ENST00000434795 FAM20CQ8IXL6 584 aa17.23■□□□□ 0.35
CPNE1-213ENST00000434795 GPR135Q8IZ08 494 aa17.23■□□□□ 0.35
CPNE1-213ENST00000434795 C2orf73Q8N5S3 287 aaPredicted RBP17.23■□□□□ 0.35
CPNE1-213ENST00000434795 PBKQ96KB5 322 aa17.23■□□□□ 0.35
CPNE1-213ENST00000434795 EPN3Q9H201 632 aa17.23■□□□□ 0.35
CPNE1-213ENST00000434795 NEU2Q9Y3R4 380 aa17.23■□□□□ 0.35
CPNE1-213ENST00000434795 AP1M2Q9Y6Q5 423 aa17.23■□□□□ 0.35
CPNE1-213ENST00000434795 FLNCQ14315 2725 aa17.23■□□□□ 0.35
CPNE1-213ENST00000434795 GOLGA8KD6RF30 607 aa17.22■□□□□ 0.35
CPNE1-213ENST00000434795 GOLGA8TH3BQL2 631 aa17.22■□□□□ 0.35
CPNE1-213ENST00000434795 KPNA5O15131 536 aa17.22■□□□□ 0.35
CPNE1-213ENST00000434795 PRICKLE3O43900 615 aaPredicted RBP17.22■□□□□ 0.35
CPNE1-213ENST00000434795 OR2B3O76000 313 aa17.22■□□□□ 0.35
CPNE1-213ENST00000434795 KRT14P02533 472 aa17.22■□□□□ 0.35
CPNE1-213ENST00000434795 PDGFAP04085 211 aa17.22■□□□□ 0.35
CPNE1-213ENST00000434795 RPN2P04844 631 aa17.22■□□□□ 0.35
CPNE1-213ENST00000434795 CBSLP0DN79 551 aa17.22■□□□□ 0.35
CPNE1-213ENST00000434795 CBSP35520 551 aa17.22■□□□□ 0.35
CPNE1-213ENST00000434795 TERF1P54274 439 aa17.22■□□□□ 0.35
CPNE1-213ENST00000434795 KLRB1Q12918 225 aa17.22■□□□□ 0.35
CPNE1-213ENST00000434795 GPS1Q13098 491 aa17.22■□□□□ 0.35
CPNE1-213ENST00000434795 CTSL3PQ5NE16 218 aa17.22■□□□□ 0.35
CPNE1-213ENST00000434795 ANKRD22Q5VYY1 191 aa17.22■□□□□ 0.35
CPNE1-213ENST00000434795 ARMC3Q5W041 872 aa17.22■□□□□ 0.35
CPNE1-213ENST00000434795 MRNIPQ6NTE8 343 aa17.22■□□□□ 0.35
CPNE1-213ENST00000434795 FAM198BQ6UWH4 519 aa17.22■□□□□ 0.35
CPNE1-213ENST00000434795 ASB18Q6ZVZ8 466 aa17.22■□□□□ 0.35
CPNE1-213ENST00000434795 OR2L8Q8NGY9 312 aa17.22■□□□□ 0.35
CPNE1-213ENST00000434795 MAGOHBQ96A72 148 aaKnown RBP17.22■□□□□ 0.35
CPNE1-213ENST00000434795 IL17FQ96PD4 163 aa17.22■□□□□ 0.35
CPNE1-213ENST00000434795 PANX3Q96QZ0 392 aa17.22■□□□□ 0.35
CPNE1-213ENST00000434795 TCF12Q99081 682 aa17.22■□□□□ 0.35
CPNE1-213ENST00000434795 SLC7A5P2Q9GIP4 190 aa17.22■□□□□ 0.35
CPNE1-213ENST00000434795 ING2Q9H160 280 aa17.22■□□□□ 0.35
CPNE1-213ENST00000434795 MLXIPLQ9NP71 852 aa17.22■□□□□ 0.35
CPNE1-213ENST00000434795 CIDEBQ9UHD4 219 aa17.22■□□□□ 0.35
CPNE1-213ENST00000434795 GNPTGQ9UJJ9 305 aa17.22■□□□□ 0.35
CPNE1-213ENST00000434795 KLHL20Q9Y2M5 609 aa17.22■□□□□ 0.35
CPNE1-213ENST00000434795 MAGEB16A2A368 324 aa17.21■□□□□ 0.35
CPNE1-213ENST00000434795 KLF7O75840 302 aaPredicted RBP17.21■□□□□ 0.35
CPNE1-213ENST00000434795 C1orf105O95561 183 aa17.21■□□□□ 0.35
CPNE1-213ENST00000434795 AGXTP21549 392 aa17.21■□□□□ 0.35
CPNE1-213ENST00000434795 FMO4P31512 558 aa17.21■□□□□ 0.35
CPNE1-213ENST00000434795 COILP38432 576 aaPredicted RBP17.21■□□□□ 0.35
CPNE1-213ENST00000434795 CCL11P51671 97 aa17.21■□□□□ 0.35
CPNE1-213ENST00000434795 SARNPP82979 210 aaKnown RBP17.21■□□□□ 0.35
CPNE1-213ENST00000434795 IGFBP7Q16270 282 aa17.21■□□□□ 0.35
CPNE1-213ENST00000434795 CYP1B1Q16678 543 aa17.21■□□□□ 0.35
CPNE1-213ENST00000434795 DEFB110Q30KQ9 67 aa17.21■□□□□ 0.35
CPNE1-213ENST00000434795 RHBDD2Q6NTF9 364 aa17.21■□□□□ 0.35
CPNE1-213ENST00000434795 MCATQ8IVS2 390 aaKnown RBP17.21■□□□□ 0.35
CPNE1-213ENST00000434795 DCUN1D3Q8IWE4 304 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms