RNA–Protein interactions for RNA: ENST00000430669.6

PTCH1-208, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-208ENST00000430669 ELAVL3Q14576 367 aaKnown RBP11.3□□□□□ -0.6
PTCH1-208ENST00000430669 CDKL4Q5MAI5 379 aa11.3□□□□□ -0.6
PTCH1-208ENST00000430669 MZT2AQ6P582 158 aa11.3□□□□□ -0.6
PTCH1-208ENST00000430669 PEX5LQ8IYB4 626 aa11.3□□□□□ -0.6
PTCH1-208ENST00000430669 SLC17A6Q9P2U8 582 aa11.3□□□□□ -0.6
PTCH1-208ENST00000430669 B3GALT2O43825 422 aa11.3□□□□□ -0.6
PTCH1-208ENST00000430669 VEGFDO43915 354 aa11.3□□□□□ -0.6
PTCH1-208ENST00000430669 PRMT3O60678 531 aa11.3□□□□□ -0.6
PTCH1-208ENST00000430669 FBXO46Q6PJ61 603 aaPredicted RBP11.3□□□□□ -0.6
PTCH1-208ENST00000430669 LUZP2Q86TE4 346 aa11.3□□□□□ -0.6
PTCH1-208ENST00000430669 GATAD2AQ86YP4 633 aa11.3□□□□□ -0.6
PTCH1-208ENST00000430669 C12orf65Q9H3J6 166 aaKnown RBP11.3□□□□□ -0.6
PTCH1-208ENST00000430669 FAM72CH0Y354 149 aa11.3□□□□□ -0.6
PTCH1-208ENST00000430669 OR1F1O43749 312 aa11.3□□□□□ -0.6
PTCH1-208ENST00000430669 IVDP26440 423 aa11.3□□□□□ -0.6
PTCH1-208ENST00000430669 IDH2P48735 452 aaKnown RBP11.3□□□□□ -0.6
PTCH1-208ENST00000430669 CLCN2P51788 898 aa11.3□□□□□ -0.6
PTCH1-208ENST00000430669 RPS21P63220 83 aaKnown RBP11.3□□□□□ -0.6
PTCH1-208ENST00000430669 GRIK2Q13002 908 aa11.3□□□□□ -0.6
PTCH1-208ENST00000430669 LRRC32Q14392 662 aa11.3□□□□□ -0.6
PTCH1-208ENST00000430669 TGFBIQ15582 683 aa11.3□□□□□ -0.6
PTCH1-208ENST00000430669 TECRLQ5HYJ1 363 aa11.3□□□□□ -0.6
PTCH1-208ENST00000430669 FAM72AQ5TYM5 149 aa11.3□□□□□ -0.6
PTCH1-208ENST00000430669 FAM72DQ6L9T8 149 aa11.3□□□□□ -0.6
PTCH1-208ENST00000430669 FAM72BQ86X60 149 aa11.3□□□□□ -0.6
PTCH1-208ENST00000430669 DENND1AQ8TEH3 1009 aa11.3□□□□□ -0.6
PTCH1-208ENST00000430669 CMTM7Q96FZ5 175 aa11.3□□□□□ -0.6
PTCH1-208ENST00000430669 OR10H1Q9Y4A9 318 aa11.3□□□□□ -0.6
PTCH1-208ENST00000430669 TNFP01375 233 aa11.3□□□□□ -0.6
PTCH1-208ENST00000430669 IFNA16P05015 189 aa11.3□□□□□ -0.6
PTCH1-208ENST00000430669 HSD3B1P14060 373 aa11.3□□□□□ -0.6
PTCH1-208ENST00000430669 HSD3B2P26439 372 aa11.3□□□□□ -0.6
PTCH1-208ENST00000430669 EIF4HQ15056 248 aaKnown RBP11.3□□□□□ -0.6
PTCH1-208ENST00000430669 PRAMEF14Q5SWL7 426 aa11.3□□□□□ -0.6
PTCH1-208ENST00000430669 MPP7Q5T2T1 576 aa11.3□□□□□ -0.6
PTCH1-208ENST00000430669 PRAMEF13Q5VWM6 474 aa11.3□□□□□ -0.6
PTCH1-208ENST00000430669 TRIQKQ629K1 86 aa11.3□□□□□ -0.6
PTCH1-208ENST00000430669 LINC00471Q8N535 108 aa11.3□□□□□ -0.6
PTCH1-208ENST00000430669 ARL10Q8N8L6 244 aa11.3□□□□□ -0.6
PTCH1-208ENST00000430669 EEF1AKMT1Q8WVE0 214 aa11.3□□□□□ -0.6
PTCH1-208ENST00000430669 LPGAT1Q92604 370 aa11.3□□□□□ -0.6
PTCH1-208ENST00000430669 RFKQ969G6 155 aa11.3□□□□□ -0.6
PTCH1-208ENST00000430669 RAB23Q9ULC3 237 aa11.3□□□□□ -0.6
PTCH1-208ENST00000430669 USP3Q9Y6I4 520 aa11.3□□□□□ -0.6
PTCH1-208ENST00000430669 AK5Q9Y6K8 562 aa11.3□□□□□ -0.6
PTCH1-208ENST00000430669 SOCS7O14512 581 aa11.3□□□□□ -0.6
PTCH1-208ENST00000430669 HMGB3O15347 200 aaKnown RBP11.3□□□□□ -0.6
PTCH1-208ENST00000430669 LILRB3O75022 631 aa11.3□□□□□ -0.6
PTCH1-208ENST00000430669 RSL1D1O76021 490 aaKnown RBP11.3□□□□□ -0.6
PTCH1-208ENST00000430669 DLGAP3O95886 979 aa11.3□□□□□ -0.6
PTCH1-208ENST00000430669 OAS1P00973 400 aaKnown RBP11.3□□□□□ -0.6
PTCH1-208ENST00000430669 TMEM44Q2T9K0 475 aa11.3□□□□□ -0.6
PTCH1-208ENST00000430669 GOLGA7Q7Z5G4 137 aa11.3□□□□□ -0.6
PTCH1-208ENST00000430669 RANBP3LQ86VV4 465 aaPredicted RBP11.3□□□□□ -0.6
PTCH1-208ENST00000430669 FIBINQ8TAL6 211 aa11.3□□□□□ -0.6
PTCH1-208ENST00000430669 HM13Q8TCT9 377 aa11.3□□□□□ -0.6
PTCH1-208ENST00000430669 DGCR14Q96DF8 476 aaKnown RBP11.3□□□□□ -0.6
PTCH1-208ENST00000430669 FCRL3Q96P31 734 aaPredicted RBP11.3□□□□□ -0.6
PTCH1-208ENST00000430669 WDR12Q9GZL7 423 aaKnown RBP11.3□□□□□ -0.6
PTCH1-208ENST00000430669 ZFC3H1O60293 1989 aaKnown RBP11.3□□□□□ -0.6
PTCH1-208ENST00000430669 OR51F1A6NGY5 319 aa11.3□□□□□ -0.6
PTCH1-208ENST00000430669 ALPIP09923 528 aa11.3□□□□□ -0.6
PTCH1-208ENST00000430669 USP39Q53GS9 565 aaKnown RBP11.3□□□□□ -0.6
PTCH1-208ENST00000430669 PIM3Q86V86 326 aa11.3□□□□□ -0.6
PTCH1-208ENST00000430669 DCUN1D3Q8IWE4 304 aa11.3□□□□□ -0.6
PTCH1-208ENST00000430669 SLC43A3Q8NBI5 491 aa11.3□□□□□ -0.6
PTCH1-208ENST00000430669 PDPRQ8NCN5 879 aa11.3□□□□□ -0.6
PTCH1-208ENST00000430669 OR10G6Q8NH81 332 aa11.3□□□□□ -0.6
PTCH1-208ENST00000430669 SRMSQ9H3Y6 488 aa11.3□□□□□ -0.6
PTCH1-208ENST00000430669 FAM120CQ9NX05 1096 aaKnown RBP11.3□□□□□ -0.6
PTCH1-208ENST00000430669 IFNW1P05000 195 aa11.29□□□□□ -0.6
PTCH1-208ENST00000430669 Q6ZVU0 165 aa11.29□□□□□ -0.6
PTCH1-208ENST00000430669 C11orf74Q86VG3 221 aa11.29□□□□□ -0.6
PTCH1-208ENST00000430669 NR4A3Q92570 626 aa11.29□□□□□ -0.6
PTCH1-208ENST00000430669 CYP2S1Q96SQ9 504 aa11.29□□□□□ -0.6
PTCH1-208ENST00000430669 DHRS4Q9BTZ2 278 aa11.29□□□□□ -0.6
PTCH1-208ENST00000430669 SPHK2Q9NRA0 654 aa11.29□□□□□ -0.6
PTCH1-208ENST00000430669 SLC2A6Q9UGQ3 507 aa11.29□□□□□ -0.6
PTCH1-208ENST00000430669 SOBPA7XYQ1 873 aa11.29□□□□□ -0.6
PTCH1-208ENST00000430669 CXCR6O00574 342 aa11.29□□□□□ -0.6
PTCH1-208ENST00000430669 FYNP06241 537 aa11.29□□□□□ -0.6
PTCH1-208ENST00000430669 ZNF33BQ06732 778 aa11.29□□□□□ -0.6
PTCH1-208ENST00000430669 C9orf64Q5T6V5 341 aa11.29□□□□□ -0.6
PTCH1-208ENST00000430669 KHDRBS2Q5VWX1 349 aaKnown RBP11.29□□□□□ -0.6
PTCH1-208ENST00000430669 GRASPQ7Z6J2 395 aaPredicted RBP11.29□□□□□ -0.6
PTCH1-208ENST00000430669 EBF4Q9BQW3 602 aa11.29□□□□□ -0.6
PTCH1-208ENST00000430669 TSPAN6O43657 245 aa11.29□□□□□ -0.6
PTCH1-208ENST00000430669 OR6A2O95222 327 aa11.29□□□□□ -0.6
PTCH1-208ENST00000430669 MPC1LP0DKB6 136 aa11.29□□□□□ -0.6
PTCH1-208ENST00000430669 FGF3P11487 239 aaPredicted RBP11.29□□□□□ -0.6
PTCH1-208ENST00000430669 VARSP26640 1264 aaKnown RBP11.29□□□□□ -0.6
PTCH1-208ENST00000430669 GSTT1P30711 240 aa11.29□□□□□ -0.6
PTCH1-208ENST00000430669 PTGES3Q15185 160 aaKnown RBP11.29□□□□□ -0.6
PTCH1-208ENST00000430669 TAB1Q15750 504 aa11.29□□□□□ -0.6
PTCH1-208ENST00000430669 TXNDC5Q8NBS9 432 aaKnown RBP11.29□□□□□ -0.6
PTCH1-208ENST00000430669 KLHDC9Q8NEP7 349 aa11.29□□□□□ -0.6
PTCH1-208ENST00000430669 BPIFB6Q8NFQ5 453 aa11.29□□□□□ -0.6
PTCH1-208ENST00000430669 BTN2A2Q8WVV5 523 aa11.29□□□□□ -0.6
PTCH1-208ENST00000430669 LMAN2LQ9H0V9 348 aa11.29□□□□□ -0.6
PTCH1-208ENST00000430669 OR2AG1Q9H205 316 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms