RNA–Protein interactions for RNA: ENST00000430547.5

NUP50-208, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-208ENST00000430547 OR2A14Q96R47 310 aa17■□□□□ 0.31
NUP50-208ENST00000430547 TCF12Q99081 682 aa17■□□□□ 0.31
NUP50-208ENST00000430547 ACTL8Q9H568 366 aa17■□□□□ 0.31
NUP50-208ENST00000430547 ACTR5Q9H9F9 607 aaPredicted RBP17■□□□□ 0.31
NUP50-208ENST00000430547 STARD5Q9NSY2 213 aa17■□□□□ 0.31
NUP50-208ENST00000430547 SPHK1Q9NYA1 384 aa17■□□□□ 0.31
NUP50-208ENST00000430547 TUBD1Q9UJT1 453 aa17■□□□□ 0.31
NUP50-208ENST00000430547 SLC39A10Q9ULF5 831 aa17■□□□□ 0.31
NUP50-208ENST00000430547 SNX12Q9UMY4 172 aa17■□□□□ 0.31
NUP50-208ENST00000430547 VPS9D1Q9Y2B5 631 aa17■□□□□ 0.31
NUP50-208ENST00000430547 MAGEB16A2A368 324 aa16.99■□□□□ 0.31
NUP50-208ENST00000430547 SDR42E2A6NKP2 422 aa16.99■□□□□ 0.31
NUP50-208ENST00000430547 CES2O00748 559 aa16.99■□□□□ 0.31
NUP50-208ENST00000430547 SLCO2B1O94956 709 aa16.99■□□□□ 0.31
NUP50-208ENST00000430547 ARNTP27540 789 aa16.99■□□□□ 0.31
NUP50-208ENST00000430547 PKLRP30613 574 aa16.99■□□□□ 0.31
NUP50-208ENST00000430547 FMO4P31512 558 aa16.99■□□□□ 0.31
NUP50-208ENST00000430547 GPS2Q13227 327 aa16.99■□□□□ 0.31
NUP50-208ENST00000430547 DHX34Q14147 1143 aaKnown RBP16.99■□□□□ 0.31
NUP50-208ENST00000430547 SLC5A12Q1EHB4 618 aa16.99■□□□□ 0.31
NUP50-208ENST00000430547 TYSND1Q2T9J0 566 aa16.99■□□□□ 0.31
NUP50-208ENST00000430547 PLEKHS1Q5SXH7 462 aa16.99■□□□□ 0.31
NUP50-208ENST00000430547 CDHR3Q6ZTQ4 885 aa16.99■□□□□ 0.31
NUP50-208ENST00000430547 CAND1Q86VP6 1230 aaKnown RBP16.99■□□□□ 0.31
NUP50-208ENST00000430547 MCUQ8NE86 351 aa16.99■□□□□ 0.31
NUP50-208ENST00000430547 SLC22A18Q96BI1 424 aa16.99■□□□□ 0.31
NUP50-208ENST00000430547 LRFN5Q96NI6 719 aa16.99■□□□□ 0.31
NUP50-208ENST00000430547 SERPINB12Q96P63 405 aa16.99■□□□□ 0.31
NUP50-208ENST00000430547 RAB11FIP5Q9BXF6 653 aa16.99■□□□□ 0.31
NUP50-208ENST00000430547 KCNF1Q9H3M0 494 aa16.99■□□□□ 0.31
NUP50-208ENST00000430547 TLN1Q9Y490 2541 aaKnown RBP16.98■□□□□ 0.31
NUP50-208ENST00000430547 FAM237BA0A1B0GVD1 139 aa16.98■□□□□ 0.31
NUP50-208ENST00000430547 E5RI56 91 aa16.98■□□□□ 0.31
NUP50-208ENST00000430547 MEN1O00255 615 aa16.98■□□□□ 0.31
NUP50-208ENST00000430547 ESR1P03372 595 aa16.98■□□□□ 0.31
NUP50-208ENST00000430547 HBQ1P09105 142 aa16.98■□□□□ 0.31
NUP50-208ENST00000430547 TPBGLP0DKB5 382 aa16.98■□□□□ 0.31
NUP50-208ENST00000430547 PTPN4P29074 926 aa16.98■□□□□ 0.31
NUP50-208ENST00000430547 THOC5Q13769 683 aaKnown RBP16.98■□□□□ 0.31
NUP50-208ENST00000430547 KYNUQ16719 465 aa16.98■□□□□ 0.31
NUP50-208ENST00000430547 CTSL3PQ5NE16 218 aa16.98■□□□□ 0.31
NUP50-208ENST00000430547 PRAMEF17Q5VTA0 474 aa16.98■□□□□ 0.31
NUP50-208ENST00000430547 SYVN1Q86TM6 617 aa16.98■□□□□ 0.31
NUP50-208ENST00000430547 C9orf43Q8TAL5 461 aaPredicted RBP16.98■□□□□ 0.31
NUP50-208ENST00000430547 LPGAT1Q92604 370 aa16.98■□□□□ 0.31
NUP50-208ENST00000430547 AKIRIN1Q9H9L7 192 aaPredicted RBP16.98■□□□□ 0.31
NUP50-208ENST00000430547 IRAK4Q9NWZ3 460 aa16.98■□□□□ 0.31
NUP50-208ENST00000430547 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.98■□□□□ 0.31
NUP50-208ENST00000430547 CIDEBQ9UHD4 219 aa16.98■□□□□ 0.31
NUP50-208ENST00000430547 MAN2B2Q9Y2E5 1009 aa16.98■□□□□ 0.31
NUP50-208ENST00000430547 CRYL1Q9Y2S2 319 aa16.98■□□□□ 0.31
NUP50-208ENST00000430547 MAD1L1Q9Y6D9 718 aa16.98■□□□□ 0.31
NUP50-208ENST00000430547 SPTA1P02549 2419 aa16.97■□□□□ 0.31
NUP50-208ENST00000430547 HELZ2Q9BYK8 2649 aaKnown RBP16.97■□□□□ 0.31
NUP50-208ENST00000430547 CTAGE9A4FU28 777 aa16.97■□□□□ 0.31
NUP50-208ENST00000430547 J3QKU1 62 aa16.97■□□□□ 0.31
NUP50-208ENST00000430547 OR2B3O76000 313 aa16.97■□□□□ 0.31
NUP50-208ENST00000430547 RECKO95980 971 aa16.97■□□□□ 0.31
NUP50-208ENST00000430547 TCP1P17987 556 aaKnown RBP16.97■□□□□ 0.31
NUP50-208ENST00000430547 CHRM3P20309 590 aa16.97■□□□□ 0.31
NUP50-208ENST00000430547 CD9P21926 228 aa16.97■□□□□ 0.31
NUP50-208ENST00000430547 RPS18P62269 152 aaKnown RBP16.97■□□□□ 0.31
NUP50-208ENST00000430547 DEFB110Q30KQ9 67 aa16.97■□□□□ 0.31
NUP50-208ENST00000430547 IZUMO3Q5VZ72 239 aa16.97■□□□□ 0.31
NUP50-208ENST00000430547 ZNF470Q6ECI4 717 aa16.97■□□□□ 0.31
NUP50-208ENST00000430547 NEPROQ6NW34 567 aa16.97■□□□□ 0.31
NUP50-208ENST00000430547 CNSTQ6PJW8 725 aa16.97■□□□□ 0.31
NUP50-208ENST00000430547 TAX1BP1Q86VP1 789 aa16.97■□□□□ 0.31
NUP50-208ENST00000430547 CILP2Q8IUL8 1156 aa16.97■□□□□ 0.31
NUP50-208ENST00000430547 PPIL6Q8IXY8 311 aa16.97■□□□□ 0.31
NUP50-208ENST00000430547 DSELQ8IZU8 1212 aa16.97■□□□□ 0.31
NUP50-208ENST00000430547 SLC38A9Q8NBW4 561 aa16.97■□□□□ 0.31
NUP50-208ENST00000430547 MAGEC3Q8TD91 643 aa16.97■□□□□ 0.31
NUP50-208ENST00000430547 RAD51AP1Q96B01 352 aa16.97■□□□□ 0.31
NUP50-208ENST00000430547 BIRC8Q96P09 236 aa16.97■□□□□ 0.31
NUP50-208ENST00000430547 CHST8Q9H2A9 424 aa16.97■□□□□ 0.31
NUP50-208ENST00000430547 CCDC68Q9H2F9 335 aa16.97■□□□□ 0.31
NUP50-208ENST00000430547 INTS7Q9NVH2 962 aaKnown RBP16.97■□□□□ 0.31
NUP50-208ENST00000430547 INTS10Q9NVR2 710 aaKnown RBP16.97■□□□□ 0.31
NUP50-208ENST00000430547 ASIC3Q9UHC3 531 aa16.97■□□□□ 0.31
NUP50-208ENST00000430547 TSR3Q9UJK0 312 aaKnown RBP16.97■□□□□ 0.31
NUP50-208ENST00000430547 FARSAQ9Y285 508 aaKnown RBP16.97■□□□□ 0.31
NUP50-208ENST00000430547 KCNMB2Q9Y691 235 aa16.97■□□□□ 0.31
NUP50-208ENST00000430547 PCM1Q15154 2024 aa16.96■□□□□ 0.31
NUP50-208ENST00000430547 RASGRF2O14827 1237 aa16.96■□□□□ 0.31
NUP50-208ENST00000430547 ZNF185O15231 689 aa16.96■□□□□ 0.31
NUP50-208ENST00000430547 ZNF749O43361 778 aa16.96■□□□□ 0.31
NUP50-208ENST00000430547 NIPSNAP2O75323 286 aa16.96■□□□□ 0.31
NUP50-208ENST00000430547 S1PR4O95977 384 aa16.96■□□□□ 0.31
NUP50-208ENST00000430547 AGXTP21549 392 aa16.96■□□□□ 0.31
NUP50-208ENST00000430547 CCNFP41002 786 aa16.96■□□□□ 0.31
NUP50-208ENST00000430547 ADARP55265 1226 aaKnown RBP16.96■□□□□ 0.31
NUP50-208ENST00000430547 NFKB2Q00653 900 aa16.96■□□□□ 0.31
NUP50-208ENST00000430547 ANKRD20A4Q4UJ75 823 aa16.96■□□□□ 0.31
NUP50-208ENST00000430547 ZNF789Q5FWF6 425 aa16.96■□□□□ 0.31
NUP50-208ENST00000430547 SYTL1Q8IYJ3 562 aa16.96■□□□□ 0.31
NUP50-208ENST00000430547 C2orf73Q8N5S3 287 aaPredicted RBP16.96■□□□□ 0.31
NUP50-208ENST00000430547 OR2L8Q8NGY9 312 aa16.96■□□□□ 0.31
NUP50-208ENST00000430547 FAM136AQ96C01 138 aa16.96■□□□□ 0.31
NUP50-208ENST00000430547 IL17FQ96PD4 163 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms