RNA–Protein interactions for RNA: ENST00000429856.1

HMGB1P9-201, Transcript of high mobility group box 1 pseudogene 9, humanhuman

BASIC

Gene HMGB1P9, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P9-201ENST00000429856 DECR1Q16698 335 aa2.83□□□□□ -1.96
HMGB1P9-201ENST00000429856 WBP2NLQ6ICG8 309 aa2.83□□□□□ -1.96
HMGB1P9-201ENST00000429856 KCTD18Q6PI47 426 aaPredicted RBP2.83□□□□□ -1.96
HMGB1P9-201ENST00000429856 MOXD1Q6UVY6 613 aa2.83□□□□□ -1.96
HMGB1P9-201ENST00000429856 UNC5DQ6UXZ4 953 aa2.83□□□□□ -1.96
HMGB1P9-201ENST00000429856 CCNI2Q6ZMN8 369 aaPredicted RBP2.83□□□□□ -1.96
HMGB1P9-201ENST00000429856 TPRG1Q6ZUI0 275 aa2.83□□□□□ -1.96
HMGB1P9-201ENST00000429856 C1orf186Q6ZWK4 172 aa2.83□□□□□ -1.96
HMGB1P9-201ENST00000429856 SPATA21Q7Z572 469 aa2.83□□□□□ -1.96
HMGB1P9-201ENST00000429856 TMPRSS11BQ86T26 416 aa2.83□□□□□ -1.96
HMGB1P9-201ENST00000429856 SLC9B2Q86UD5 537 aa2.83□□□□□ -1.96
HMGB1P9-201ENST00000429856 ERC1Q8IUD2 1116 aa2.83□□□□□ -1.96
HMGB1P9-201ENST00000429856 MAML2Q8IZL2 1156 aaPredicted RBP2.83□□□□□ -1.96
HMGB1P9-201ENST00000429856 ARL6IP6Q8N6S5 226 aa2.83□□□□□ -1.96
HMGB1P9-201ENST00000429856 KCNH5Q8NCM2 988 aa2.83□□□□□ -1.96
HMGB1P9-201ENST00000429856 OR7G3Q8NG95 312 aa2.83□□□□□ -1.96
HMGB1P9-201ENST00000429856 OR5R1Q8NH85 324 aa2.83□□□□□ -1.96
HMGB1P9-201ENST00000429856 LMO3Q8TAP4 145 aa2.83□□□□□ -1.96
HMGB1P9-201ENST00000429856 ST7LQ8TDW4 575 aa2.83□□□□□ -1.96
HMGB1P9-201ENST00000429856 NR4A3Q92570 626 aa2.83□□□□□ -1.96
HMGB1P9-201ENST00000429856 BCL2L2Q92843 193 aaPredicted RBP2.83□□□□□ -1.96
HMGB1P9-201ENST00000429856 DNASE1L2Q92874 299 aa2.83□□□□□ -1.96
HMGB1P9-201ENST00000429856 ATP6V0A1Q93050 837 aa2.83□□□□□ -1.96
HMGB1P9-201ENST00000429856 BSCL2Q96G97 398 aaPredicted RBP2.83□□□□□ -1.96
HMGB1P9-201ENST00000429856 SCMH1Q96GD3 660 aa2.83□□□□□ -1.96
HMGB1P9-201ENST00000429856 HES6Q96HZ4 224 aa2.83□□□□□ -1.96
HMGB1P9-201ENST00000429856 PKNOX2Q96KN3 472 aa2.83□□□□□ -1.96
HMGB1P9-201ENST00000429856 RUNDC3BQ96NL0 473 aa2.83□□□□□ -1.96
HMGB1P9-201ENST00000429856 OR6C1Q96RD1 312 aa2.83□□□□□ -1.96
HMGB1P9-201ENST00000429856 HNRNPABQ99729 332 aaKnown RBP2.83□□□□□ -1.96
HMGB1P9-201ENST00000429856 CMKLR1Q99788 373 aa2.83□□□□□ -1.96
HMGB1P9-201ENST00000429856 ZNF350Q9GZX5 532 aa2.83□□□□□ -1.96
HMGB1P9-201ENST00000429856 P2RY12Q9H244 342 aa2.83□□□□□ -1.96
HMGB1P9-201ENST00000429856 SEMA6AQ9H2E6 1030 aa2.83□□□□□ -1.96
HMGB1P9-201ENST00000429856 GAREM1Q9H706 876 aa2.83□□□□□ -1.96
HMGB1P9-201ENST00000429856 MINDY3Q9H8M7 445 aa2.83□□□□□ -1.96
HMGB1P9-201ENST00000429856 PIH1D3Q9NQM4 214 aaKnown RBP2.83□□□□□ -1.96
HMGB1P9-201ENST00000429856 MCM9Q9NXL9 1143 aa2.83□□□□□ -1.96
HMGB1P9-201ENST00000429856 ERAP1Q9NZ08 941 aa2.83□□□□□ -1.96
HMGB1P9-201ENST00000429856 NINJ2Q9NZG7 142 aa2.83□□□□□ -1.96
HMGB1P9-201ENST00000429856 ZNF224Q9NZL3 707 aa2.83□□□□□ -1.96
HMGB1P9-201ENST00000429856 KLHL9Q9P2J3 617 aa2.83□□□□□ -1.96
HMGB1P9-201ENST00000429856 SIX4Q9UIU6 781 aa2.83□□□□□ -1.96
HMGB1P9-201ENST00000429856 MOSPD1Q9UJG1 213 aa2.83□□□□□ -1.96
HMGB1P9-201ENST00000429856 CPSF3Q9UKF6 684 aaKnown RBP2.83□□□□□ -1.96
HMGB1P9-201ENST00000429856 APPL1Q9UKG1 709 aa2.83□□□□□ -1.96
HMGB1P9-201ENST00000429856 ITGA11Q9UKX5 1188 aa2.83□□□□□ -1.96
HMGB1P9-201ENST00000429856 TTC7AQ9ULT0 858 aaPredicted RBP2.83□□□□□ -1.96
HMGB1P9-201ENST00000429856 MTF2Q9Y483 593 aaPredicted RBP2.83□□□□□ -1.96
HMGB1P9-201ENST00000429856 TAF1P21675 1872 aa2.83□□□□□ -1.96
HMGB1P9-201ENST00000429856 SAA2-SAA4A0A096LPE2 208 aa2.82□□□□□ -1.96
HMGB1P9-201ENST00000429856 OOEPA6NGQ2 149 aa2.82□□□□□ -1.96
HMGB1P9-201ENST00000429856 SOCS6O14544 535 aa2.82□□□□□ -1.96
HMGB1P9-201ENST00000429856 MEIS2O14770 477 aa2.82□□□□□ -1.96
HMGB1P9-201ENST00000429856 IFIT3O14879 490 aaKnown RBP2.82□□□□□ -1.96
HMGB1P9-201ENST00000429856 ANKRD28O15084 1053 aa2.82□□□□□ -1.96
HMGB1P9-201ENST00000429856 PGRMC2O15173 223 aa2.82□□□□□ -1.96
HMGB1P9-201ENST00000429856 SSX4O60224 188 aa2.82□□□□□ -1.96
HMGB1P9-201ENST00000429856 SEC22BO75396 215 aa2.82□□□□□ -1.96
HMGB1P9-201ENST00000429856 CLDN14O95500 239 aa2.82□□□□□ -1.96
HMGB1P9-201ENST00000429856 PMS2P2O95744 297 aa2.82□□□□□ -1.96
HMGB1P9-201ENST00000429856 PNPP00491 289 aa2.82□□□□□ -1.96
HMGB1P9-201ENST00000429856 EPORP19235 508 aa2.82□□□□□ -1.96
HMGB1P9-201ENST00000429856 ITIH1P19827 911 aa2.82□□□□□ -1.96
HMGB1P9-201ENST00000429856 KCNA5P22460 613 aa2.82□□□□□ -1.96
HMGB1P9-201ENST00000429856 TCEA1P23193 301 aaKnown RBP2.82□□□□□ -1.96
HMGB1P9-201ENST00000429856 CLCNKAP51800 687 aa2.82□□□□□ -1.96
HMGB1P9-201ENST00000429856 HNRNPH2P55795 449 aaKnown RBP2.82□□□□□ -1.96
HMGB1P9-201ENST00000429856 RUNX1T1Q06455 604 aa2.82□□□□□ -1.96
HMGB1P9-201ENST00000429856 ZNF155Q12901 538 aaPredicted RBP2.82□□□□□ -1.96
HMGB1P9-201ENST00000429856 NPRL3Q12980 569 aa2.82□□□□□ -1.96
HMGB1P9-201ENST00000429856 RPS6KA1Q15418 735 aa2.82□□□□□ -1.96
HMGB1P9-201ENST00000429856 CTF1Q16619 201 aa2.82□□□□□ -1.96
HMGB1P9-201ENST00000429856 TTC31Q49AM3 519 aaPredicted RBP2.82□□□□□ -1.96
HMGB1P9-201ENST00000429856 RAB6CQ53S08 254 aa2.82□□□□□ -1.96
HMGB1P9-201ENST00000429856 TCTE1Q5JU00 501 aa2.82□□□□□ -1.96
HMGB1P9-201ENST00000429856 DCST1Q5T197 706 aa2.82□□□□□ -1.96
HMGB1P9-201ENST00000429856 SFMBT2Q5VUG0 894 aa2.82□□□□□ -1.96
HMGB1P9-201ENST00000429856 FRG2Q64ET8 278 aa2.82□□□□□ -1.96
HMGB1P9-201ENST00000429856 C18orf63Q68DL7 685 aa2.82□□□□□ -1.96
HMGB1P9-201ENST00000429856 TXNRD3NBQ6F5E7 133 aa2.82□□□□□ -1.96
HMGB1P9-201ENST00000429856 RAD9BQ6WBX8 426 aa2.82□□□□□ -1.96
HMGB1P9-201ENST00000429856 LIN28BQ6ZN17 250 aaKnown RBP eCLIP2.82□□□□□ -1.96
HMGB1P9-201ENST00000429856 TMPRSS11FQ6ZWK6 438 aa2.82□□□□□ -1.96
HMGB1P9-201ENST00000429856 Q75L30 129 aa2.82□□□□□ -1.96
HMGB1P9-201ENST00000429856 DET1Q7L5Y6 550 aa2.82□□□□□ -1.96
HMGB1P9-201ENST00000429856 DGLUCYQ7Z3D6 616 aa2.82□□□□□ -1.96
HMGB1P9-201ENST00000429856 EXOC3L1Q86VI1 746 aa2.82□□□□□ -1.96
HMGB1P9-201ENST00000429856 FAM114A1Q8IWE2 563 aa2.82□□□□□ -1.96
HMGB1P9-201ENST00000429856 PM20D2Q8IYS1 436 aa2.82□□□□□ -1.96
HMGB1P9-201ENST00000429856 APCDD1Q8J025 514 aa2.82□□□□□ -1.96
HMGB1P9-201ENST00000429856 TEX9Q8N6V9 391 aa2.82□□□□□ -1.96
HMGB1P9-201ENST00000429856 TANKQ92844 425 aa2.82□□□□□ -1.96
HMGB1P9-201ENST00000429856 RIT1Q92963 219 aa2.82□□□□□ -1.96
HMGB1P9-201ENST00000429856 TAAR8Q969N4 342 aa2.82□□□□□ -1.96
HMGB1P9-201ENST00000429856 TSGA13Q96PP4 275 aa2.82□□□□□ -1.96
HMGB1P9-201ENST00000429856 FEVQ99581 238 aa2.82□□□□□ -1.96
HMGB1P9-201ENST00000429856 SEMA3CQ99985 751 aa2.82□□□□□ -1.96
HMGB1P9-201ENST00000429856 FSD1Q9BTV5 496 aa2.82□□□□□ -1.96
HMGB1P9-201ENST00000429856 FNDC11Q9BVV2 318 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms