RNA–Protein interactions for RNA: ENST00000429836.5

SEMA4D-209, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-209ENST00000429836 UBE2J2Q8N2K1 259 aa10.85□□□□□ -0.67
SEMA4D-209ENST00000429836 LSMEM1Q8N8F7 131 aa10.85□□□□□ -0.67
SEMA4D-209ENST00000429836 OR8J3Q8NGG0 315 aa10.85□□□□□ -0.67
SEMA4D-209ENST00000429836 OMA1Q96E52 524 aa10.85□□□□□ -0.67
SEMA4D-209ENST00000429836 SIGLEC11Q96RL6 698 aa10.85□□□□□ -0.67
SEMA4D-209ENST00000429836 TMEM39AQ9NV64 488 aa10.85□□□□□ -0.67
SEMA4D-209ENST00000429836 PDP1Q9P0J1 537 aaPredicted RBP10.85□□□□□ -0.67
SEMA4D-209ENST00000429836 KCNN3Q9UGI6 736 aa10.85□□□□□ -0.67
SEMA4D-209ENST00000429836 HMX3A6NHT5 357 aa10.85□□□□□ -0.67
SEMA4D-209ENST00000429836 ANKRD28O15084 1053 aa10.85□□□□□ -0.67
SEMA4D-209ENST00000429836 MATN3O15232 486 aa10.85□□□□□ -0.67
SEMA4D-209ENST00000429836 RGS5O15539 181 aa10.85□□□□□ -0.67
SEMA4D-209ENST00000429836 AKR7A2O43488 359 aa10.85□□□□□ -0.67
SEMA4D-209ENST00000429836 RPS17P08708 135 aaKnown RBP10.85□□□□□ -0.67
SEMA4D-209ENST00000429836 PIRTP0C851 137 aa10.85□□□□□ -0.67
SEMA4D-209ENST00000429836 IL7P13232 177 aa10.85□□□□□ -0.67
SEMA4D-209ENST00000429836 MSH3P20585 1137 aa10.85□□□□□ -0.67
SEMA4D-209ENST00000429836 CD86P42081 329 aa10.85□□□□□ -0.67
SEMA4D-209ENST00000429836 MAGEA11P43364 429 aa10.85□□□□□ -0.67
SEMA4D-209ENST00000429836 DAOAP59103 153 aa10.85□□□□□ -0.67
SEMA4D-209ENST00000429836 FCHO2Q0JRZ9 810 aa10.85□□□□□ -0.67
SEMA4D-209ENST00000429836 MADCAM1Q13477 382 aa10.85□□□□□ -0.67
SEMA4D-209ENST00000429836 KEAP1Q14145 624 aa10.85□□□□□ -0.67
SEMA4D-209ENST00000429836 IHHQ14623 411 aa10.85□□□□□ -0.67
SEMA4D-209ENST00000429836 NR6A1Q15406 480 aa10.85□□□□□ -0.67
SEMA4D-209ENST00000429836 PTCHD3Q3KNS1 767 aa10.85□□□□□ -0.67
SEMA4D-209ENST00000429836 FAM174BQ3ZCQ3 159 aa10.85□□□□□ -0.67
SEMA4D-209ENST00000429836 RFTN2Q52LD8 501 aaPredicted RBP10.85□□□□□ -0.67
SEMA4D-209ENST00000429836 TJAP1Q5JTD0 557 aa10.85□□□□□ -0.67
SEMA4D-209ENST00000429836 IL27RAQ6UWB1 636 aa10.85□□□□□ -0.67
SEMA4D-209ENST00000429836 KBTBD8Q8NFY9 601 aa10.85□□□□□ -0.67
SEMA4D-209ENST00000429836 UBASH3BQ8TF42 649 aa10.85□□□□□ -0.67
SEMA4D-209ENST00000429836 PPP1R13LQ8WUF5 828 aa10.85□□□□□ -0.67
SEMA4D-209ENST00000429836 SLC7A6Q92536 515 aa10.85□□□□□ -0.67
SEMA4D-209ENST00000429836 TMEM30AQ9NV96 361 aa10.85□□□□□ -0.67
SEMA4D-209ENST00000429836 UBA2Q9UBT2 640 aaPredicted RBP10.85□□□□□ -0.67
SEMA4D-209ENST00000429836 TSR3Q9UJK0 312 aaKnown RBP10.85□□□□□ -0.67
SEMA4D-209ENST00000429836 NDRG4Q9ULP0 352 aaKnown RBP10.85□□□□□ -0.67
SEMA4D-209ENST00000429836 DICER1Q9UPY3 1922 aaKnown RBP10.84□□□□□ -0.67
SEMA4D-209ENST00000429836 UBA6A0AVT1 1052 aaPredicted RBP10.84□□□□□ -0.67
SEMA4D-209ENST00000429836 OR6C70A6NIJ9 312 aa10.84□□□□□ -0.67
SEMA4D-209ENST00000429836 ARNTLO00327 626 aa10.84□□□□□ -0.67
SEMA4D-209ENST00000429836 SLC7A4O43246 635 aa10.84□□□□□ -0.67
SEMA4D-209ENST00000429836 SCELO95171 688 aa10.84□□□□□ -0.67
SEMA4D-209ENST00000429836 SLC2A3P11169 496 aa10.84□□□□□ -0.67
SEMA4D-209ENST00000429836 EFNA1P20827 205 aaPredicted RBP10.84□□□□□ -0.67
SEMA4D-209ENST00000429836 UQCRC1P31930 480 aa10.84□□□□□ -0.67
SEMA4D-209ENST00000429836 CCR1P32246 355 aa10.84□□□□□ -0.67
SEMA4D-209ENST00000429836 MRPL19P49406 292 aaKnown RBP10.84□□□□□ -0.67
SEMA4D-209ENST00000429836 RPP38P78345 283 aaKnown RBP10.84□□□□□ -0.67
SEMA4D-209ENST00000429836 BAK1Q16611 211 aa10.84□□□□□ -0.67
SEMA4D-209ENST00000429836 TRIM60Q495X7 471 aa10.84□□□□□ -0.67
SEMA4D-209ENST00000429836 KDM4DQ6B0I6 523 aa10.84□□□□□ -0.67
SEMA4D-209ENST00000429836 KDELC1Q6UW63 502 aa10.84□□□□□ -0.67
SEMA4D-209ENST00000429836 GPRIN3Q6ZVF9 776 aa10.84□□□□□ -0.67
SEMA4D-209ENST00000429836 NLRP8Q86W28 1048 aa10.84□□□□□ -0.67
SEMA4D-209ENST00000429836 CCDC117Q8IWD4 279 aaPredicted RBP10.84□□□□□ -0.67
SEMA4D-209ENST00000429836 ENTHD1Q8IYW4 607 aa10.84□□□□□ -0.67
SEMA4D-209ENST00000429836 AADATQ8N5Z0 425 aa10.84□□□□□ -0.67
SEMA4D-209ENST00000429836 LRRC52Q8N7C0 313 aa10.84□□□□□ -0.67
SEMA4D-209ENST00000429836 SLC13A3Q8WWT9 602 aa10.84□□□□□ -0.67
SEMA4D-209ENST00000429836 KLHL5Q96PQ7 755 aa10.84□□□□□ -0.67
SEMA4D-209ENST00000429836 SLC30A2Q9BRI3 323 aa10.84□□□□□ -0.67
SEMA4D-209ENST00000429836 NT5MQ9NPB1 228 aa10.84□□□□□ -0.67
SEMA4D-209ENST00000429836 ATP13A2Q9NQ11 1180 aa10.84□□□□□ -0.67
SEMA4D-209ENST00000429836 TAS2R16Q9NYV7 291 aa10.84□□□□□ -0.67
SEMA4D-209ENST00000429836 PCTPQ9UKL6 214 aa10.84□□□□□ -0.67
SEMA4D-209ENST00000429836 GRIP1Q9Y3R0 1128 aa10.84□□□□□ -0.67
SEMA4D-209ENST00000429836 PNMA8CA0A1B0GUJ8 204 aa10.84□□□□□ -0.67
SEMA4D-209ENST00000429836 POLR1CO15160 346 aaPredicted RBP10.84□□□□□ -0.67
SEMA4D-209ENST00000429836 KERAO60938 352 aa10.84□□□□□ -0.67
SEMA4D-209ENST00000429836 ZNF780AO75290 641 aaPredicted RBP10.84□□□□□ -0.67
SEMA4D-209ENST00000429836 SNX4O95219 450 aa10.84□□□□□ -0.67
SEMA4D-209ENST00000429836 TNFSF8P32971 234 aa10.84□□□□□ -0.67
SEMA4D-209ENST00000429836 ERVPABLB-1P60509 514 aa10.84□□□□□ -0.67
SEMA4D-209ENST00000429836 GPAT3Q53EU6 434 aa10.84□□□□□ -0.67
SEMA4D-209ENST00000429836 PLPPR4Q7Z2D5 763 aa10.84□□□□□ -0.67
SEMA4D-209ENST00000429836 MILR1Q7Z6M3 343 aa10.84□□□□□ -0.67
SEMA4D-209ENST00000429836 GPR149Q86SP6 731 aa10.84□□□□□ -0.67
SEMA4D-209ENST00000429836 ATG16L2Q8NAA4 619 aa10.84□□□□□ -0.67
SEMA4D-209ENST00000429836 RHEBL1Q8TAI7 183 aa10.84□□□□□ -0.67
SEMA4D-209ENST00000429836 STAG3L4Q8TBR4 150 aa10.84□□□□□ -0.67
SEMA4D-209ENST00000429836 NUSAP1Q9BXS6 441 aaKnown RBP10.84□□□□□ -0.67
SEMA4D-209ENST00000429836 MFSD1Q9H3U5 465 aa10.84□□□□□ -0.67
SEMA4D-209ENST00000429836 TFB2MQ9H5Q4 396 aaKnown RBP10.84□□□□□ -0.67
SEMA4D-209ENST00000429836 KRT84Q9NSB2 600 aa10.84□□□□□ -0.67
SEMA4D-209ENST00000429836 SIRT5Q9NXA8 310 aa10.84□□□□□ -0.67
SEMA4D-209ENST00000429836 CCDC59Q9P031 241 aaKnown RBP10.84□□□□□ -0.67
SEMA4D-209ENST00000429836 KIF17Q9P2E2 1029 aa10.84□□□□□ -0.67
SEMA4D-209ENST00000429836 GABRQQ9UN88 632 aa10.84□□□□□ -0.67
SEMA4D-209ENST00000429836 A3GALT2U3KPV4 340 aa10.84□□□□□ -0.67
SEMA4D-209ENST00000429836 ZNF236Q9UL36 1845 aa10.84□□□□□ -0.67
SEMA4D-209ENST00000429836 BTN3A1O00481 513 aa10.83□□□□□ -0.68
SEMA4D-209ENST00000429836 KIAA0513O60268 411 aa10.83□□□□□ -0.68
SEMA4D-209ENST00000429836 HBP1O60381 514 aa10.83□□□□□ -0.68
SEMA4D-209ENST00000429836 SEC22BO75396 215 aa10.83□□□□□ -0.68
SEMA4D-209ENST00000429836 GJB3O75712 270 aa10.83□□□□□ -0.68
SEMA4D-209ENST00000429836 B3GALT4O96024 378 aa10.83□□□□□ -0.68
SEMA4D-209ENST00000429836 CSF2P04141 144 aa10.83□□□□□ -0.68
SEMA4D-209ENST00000429836 CNPP09543 421 aaKnown RBP10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms