RNA–Protein interactions for RNA: ENST00000428026.6

PTPRU-204, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,550 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-204ENST00000428026 AASSQ9UDR5 926 aa14.22□□□□□ -0.13
PTPRU-204ENST00000428026 AQP12BA6NM10 295 aa14.22□□□□□ -0.13
PTPRU-204ENST00000428026 PLOD2O00469 737 aa14.22□□□□□ -0.13
PTPRU-204ENST00000428026 CDH1P12830 882 aa14.22□□□□□ -0.13
PTPRU-204ENST00000428026 ITIH1P19827 911 aa14.22□□□□□ -0.13
PTPRU-204ENST00000428026 CES1P23141 567 aa14.22□□□□□ -0.13
PTPRU-204ENST00000428026 LBX1P52954 281 aa14.22□□□□□ -0.13
PTPRU-204ENST00000428026 RAB15P59190 212 aa14.22□□□□□ -0.13
PTPRU-204ENST00000428026 AQP12AQ8IXF9 295 aa14.22□□□□□ -0.13
PTPRU-204ENST00000428026 ARMC10Q8N2F6 343 aa14.22□□□□□ -0.13
PTPRU-204ENST00000428026 OR10Q1Q8NGQ4 319 aa14.22□□□□□ -0.13
PTPRU-204ENST00000428026 ZC3H10Q96K80 434 aaKnown RBP14.22□□□□□ -0.13
PTPRU-204ENST00000428026 EXO5Q9H790 373 aa14.22□□□□□ -0.13
PTPRU-204ENST00000428026 NECTIN3Q9NQS3 549 aa14.22□□□□□ -0.13
PTPRU-204ENST00000428026 DTLQ9NZJ0 730 aa14.22□□□□□ -0.13
PTPRU-204ENST00000428026 FKBPLQ9UIM3 349 aa14.22□□□□□ -0.13
PTPRU-204ENST00000428026 ABCG2Q9UNQ0 655 aa14.22□□□□□ -0.13
PTPRU-204ENST00000428026 SMIM30A4D0T7 59 aa14.22□□□□□ -0.13
PTPRU-204ENST00000428026 FPGSQ05932 587 aa14.22□□□□□ -0.13
PTPRU-204ENST00000428026 LARS2Q15031 903 aaKnown RBP14.22□□□□□ -0.13
PTPRU-204ENST00000428026 PLEKHG6Q3KR16 790 aa14.22□□□□□ -0.13
PTPRU-204ENST00000428026 GALNT12Q8IXK2 581 aa14.22□□□□□ -0.13
PTPRU-204ENST00000428026 NAT8LQ8N9F0 302 aa14.22□□□□□ -0.13
PTPRU-204ENST00000428026 ARMC5Q96C12 935 aa14.22□□□□□ -0.13
PTPRU-204ENST00000428026 LRRC58Q96CX6 371 aa14.22□□□□□ -0.13
PTPRU-204ENST00000428026 BTN2A3PQ96KV6 586 aa14.22□□□□□ -0.13
PTPRU-204ENST00000428026 CDC40O60508 579 aaKnown RBP eCLIP14.22□□□□□ -0.13
PTPRU-204ENST00000428026 GIMD1P0DJR0 217 aa14.22□□□□□ -0.13
PTPRU-204ENST00000428026 CSTF2P33240 577 aaKnown RBP eCLIP14.22□□□□□ -0.13
PTPRU-204ENST00000428026 DNASE1L1P49184 302 aa14.22□□□□□ -0.13
PTPRU-204ENST00000428026 ASTE1Q2TB18 679 aaPredicted RBP14.22□□□□□ -0.13
PTPRU-204ENST00000428026 DRICH1Q6PGQ1 229 aaPredicted RBP14.22□□□□□ -0.13
PTPRU-204ENST00000428026 GET4Q7L5D6 327 aaPredicted RBP14.22□□□□□ -0.13
PTPRU-204ENST00000428026 ZNF557Q8N988 423 aaPredicted RBP14.22□□□□□ -0.13
PTPRU-204ENST00000428026 OXSMQ9NWU1 459 aa14.22□□□□□ -0.13
PTPRU-204ENST00000428026 HPF1Q9NWY4 346 aa14.22□□□□□ -0.13
PTPRU-204ENST00000428026 C1orf109Q9NX04 203 aa14.22□□□□□ -0.13
PTPRU-204ENST00000428026 OR51F1A6NGY5 319 aa14.21□□□□□ -0.13
PTPRU-204ENST00000428026 ARL5CA6NH57 179 aa14.21□□□□□ -0.13
PTPRU-204ENST00000428026 C1RP00736 705 aa14.21□□□□□ -0.13
PTPRU-204ENST00000428026 SLC15A1P46059 708 aa14.21□□□□□ -0.13
PTPRU-204ENST00000428026 MAPK12P53778 367 aa14.21□□□□□ -0.13
PTPRU-204ENST00000428026 AP1S2P56377 157 aa14.21□□□□□ -0.13
PTPRU-204ENST00000428026 SF1Q15637 639 aaKnown RBP14.21□□□□□ -0.13
PTPRU-204ENST00000428026 KIAA1161Q6NSJ0 714 aa14.21□□□□□ -0.13
PTPRU-204ENST00000428026 RGL4Q8IZJ4 473 aa14.21□□□□□ -0.13
PTPRU-204ENST00000428026 OR2L5Q8NG80 312 aa14.21□□□□□ -0.13
PTPRU-204ENST00000428026 OR10G2Q8NGC3 310 aa14.21□□□□□ -0.13
PTPRU-204ENST00000428026 SMG7Q92540 1137 aaKnown RBP14.21□□□□□ -0.13
PTPRU-204ENST00000428026 C8orf48Q96LL4 319 aa14.21□□□□□ -0.13
PTPRU-204ENST00000428026 ITM2CQ9NQX7 267 aa14.21□□□□□ -0.13
PTPRU-204ENST00000428026 POLE4Q9NR33 117 aa14.21□□□□□ -0.13
PTPRU-204ENST00000428026 MAU2Q9Y6X3 613 aa14.21□□□□□ -0.13
PTPRU-204ENST00000428026 C10orf71Q711Q0 1435 aa14.21□□□□□ -0.13
PTPRU-204ENST00000428026 FAM234BA2RU67 622 aa14.21□□□□□ -0.13
PTPRU-204ENST00000428026 SH3D21A4FU49 640 aa14.21□□□□□ -0.13
PTPRU-204ENST00000428026 TFPIP10646 304 aa14.21□□□□□ -0.13
PTPRU-204ENST00000428026 SP2Q02086 613 aa14.21□□□□□ -0.13
PTPRU-204ENST00000428026 TNFAIP8L2Q6P589 184 aaPredicted RBP14.21□□□□□ -0.13
PTPRU-204ENST00000428026 HDAC2Q92769 488 aaKnown RBP14.21□□□□□ -0.13
PTPRU-204ENST00000428026 SLC25A51Q9H1U9 297 aa14.21□□□□□ -0.13
PTPRU-204ENST00000428026 BCAS3Q9H6U6 928 aa14.21□□□□□ -0.13
PTPRU-204ENST00000428026 AKTIPQ9H8T0 292 aa14.21□□□□□ -0.13
PTPRU-204ENST00000428026 MED11Q9P086 117 aa14.21□□□□□ -0.13
PTPRU-204ENST00000428026 ZDHHC2Q9UIJ5 367 aa14.21□□□□□ -0.13
PTPRU-204ENST00000428026 DOT1LQ8TEK3 1739 aa14.21□□□□□ -0.13
PTPRU-204ENST00000428026 XKRYO14609 159 aa14.21□□□□□ -0.13
PTPRU-204ENST00000428026 CPN2P22792 545 aa14.21□□□□□ -0.13
PTPRU-204ENST00000428026 GNALP38405 381 aa14.21□□□□□ -0.13
PTPRU-204ENST00000428026 HADHBP55084 474 aaKnown RBP14.21□□□□□ -0.13
PTPRU-204ENST00000428026 TSPAN5P62079 268 aa14.21□□□□□ -0.13
PTPRU-204ENST00000428026 PARP15Q460N3 678 aa14.21□□□□□ -0.13
PTPRU-204ENST00000428026 SERPINA9Q86WD7 417 aa14.21□□□□□ -0.13
PTPRU-204ENST00000428026 SIAH1Q8IUQ4 282 aa14.21□□□□□ -0.13
PTPRU-204ENST00000428026 OR7D4Q8NG98 312 aa14.21□□□□□ -0.13
PTPRU-204ENST00000428026 CLEC4CQ8WTT0 213 aa14.21□□□□□ -0.13
PTPRU-204ENST00000428026 CST11Q9H112 138 aa14.21□□□□□ -0.13
PTPRU-204ENST00000428026 WRBO00258 174 aa14.21□□□□□ -0.14
PTPRU-204ENST00000428026 SMAD9O15198 467 aaKnown RBP14.21□□□□□ -0.14
PTPRU-204ENST00000428026 MATN3O15232 486 aa14.21□□□□□ -0.14
PTPRU-204ENST00000428026 REM1O75628 298 aa14.21□□□□□ -0.14
PTPRU-204ENST00000428026 CSN2P05814 226 aa14.21□□□□□ -0.14
PTPRU-204ENST00000428026 FECHP22830 423 aa14.21□□□□□ -0.14
PTPRU-204ENST00000428026 SPAM1P38567 509 aa14.21□□□□□ -0.14
PTPRU-204ENST00000428026 VEGFBP49765 207 aa14.21□□□□□ -0.14
PTPRU-204ENST00000428026 VBP1P61758 197 aa14.21□□□□□ -0.14
PTPRU-204ENST00000428026 GAD2Q05329 585 aa14.21□□□□□ -0.14
PTPRU-204ENST00000428026 MEP1AQ16819 746 aa14.21□□□□□ -0.14
PTPRU-204ENST00000428026 SLITRK4Q8IW52 837 aa14.21□□□□□ -0.14
PTPRU-204ENST00000428026 FBXO22Q8NEZ5 403 aa14.21□□□□□ -0.14
PTPRU-204ENST00000428026 RASSF5Q8WWW0 418 aa14.21□□□□□ -0.14
PTPRU-204ENST00000428026 PAK6Q9NQU5 681 aaPredicted RBP14.21□□□□□ -0.14
PTPRU-204ENST00000428026 RGPD2P0DJD1 1756 aa14.21□□□□□ -0.14
PTPRU-204ENST00000428026 ANXA2P2A6NMY6 339 aa14.2□□□□□ -0.14
PTPRU-204ENST00000428026 XPNPEP2O43895 674 aa14.2□□□□□ -0.14
PTPRU-204ENST00000428026 KERAO60938 352 aa14.2□□□□□ -0.14
PTPRU-204ENST00000428026 CDK14O94921 469 aa14.2□□□□□ -0.14
PTPRU-204ENST00000428026 OPN1SWP03999 348 aa14.2□□□□□ -0.14
PTPRU-204ENST00000428026 ANXA2P07355 339 aaKnown RBP14.2□□□□□ -0.14
PTPRU-204ENST00000428026 SLC10A3P09131 477 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms