RNA–Protein interactions for RNA: ENST00000424135.5

PLOD3-204, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 5

Gene PLOD3, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-204ENST00000424135 RPA4Q13156 261 aa11.28□□□□□ -0.6
PLOD3-204ENST00000424135 ITPRIPL1Q6GPH6 555 aa11.28□□□□□ -0.6
PLOD3-204ENST00000424135 METTL27Q8N6F8 245 aaPredicted RBP11.28□□□□□ -0.6
PLOD3-204ENST00000424135 LINC01555Q8NAE3 123 aa11.28□□□□□ -0.6
PLOD3-204ENST00000424135 TTC13Q8NBP0 860 aa11.28□□□□□ -0.6
PLOD3-204ENST00000424135 GRHL3Q8TE85 626 aa11.28□□□□□ -0.6
PLOD3-204ENST00000424135 N4BP2L2Q92802 583 aaPredicted RBP11.28□□□□□ -0.6
PLOD3-204ENST00000424135 CDKN2AIPNLQ96HQ2 116 aa11.28□□□□□ -0.6
PLOD3-204ENST00000424135 SPATA13Q96N96 652 aa11.28□□□□□ -0.6
PLOD3-204ENST00000424135 SMARCAL1Q9NZC9 954 aa11.28□□□□□ -0.6
PLOD3-204ENST00000424135 NDOR1Q9UHB4 597 aa11.28□□□□□ -0.6
PLOD3-204ENST00000424135 INTUQ9ULD6 942 aa11.28□□□□□ -0.6
PLOD3-204ENST00000424135 OSGIN2Q9Y236 505 aa11.28□□□□□ -0.6
PLOD3-204ENST00000424135 ASF1AQ9Y294 204 aa11.28□□□□□ -0.6
PLOD3-204ENST00000424135 AP1M2Q9Y6Q5 423 aa11.28□□□□□ -0.6
PLOD3-204ENST00000424135 DOCK10Q96BY6 2186 aa11.28□□□□□ -0.6
PLOD3-204ENST00000424135 ANKRD12Q6UB98 2062 aa11.28□□□□□ -0.6
PLOD3-204ENST00000424135 SLC5A10A0PJK1 596 aa11.27□□□□□ -0.61
PLOD3-204ENST00000424135 ARHGAP10A1A4S6 786 aa11.27□□□□□ -0.61
PLOD3-204ENST00000424135 MACROD2A1Z1Q3 448 aa11.27□□□□□ -0.61
PLOD3-204ENST00000424135 RCCD1A6NED2 376 aa11.27□□□□□ -0.61
PLOD3-204ENST00000424135 AGPSO00116 658 aa11.27□□□□□ -0.61
PLOD3-204ENST00000424135 PJA2O43164 708 aa11.27□□□□□ -0.61
PLOD3-204ENST00000424135 MAP3K7O43318 606 aa11.27□□□□□ -0.61
PLOD3-204ENST00000424135 OR1I1O60431 355 aa11.27□□□□□ -0.61
PLOD3-204ENST00000424135 ZG16O60844 167 aa11.27□□□□□ -0.61
PLOD3-204ENST00000424135 METTL18O95568 372 aa11.27□□□□□ -0.61
PLOD3-204ENST00000424135 ALPPP05187 535 aa11.27□□□□□ -0.61
PLOD3-204ENST00000424135 RBP3P10745 1247 aa11.27□□□□□ -0.61
PLOD3-204ENST00000424135 MAGP20916 626 aa11.27□□□□□ -0.61
PLOD3-204ENST00000424135 ALAS2P22557 587 aa11.27□□□□□ -0.61
PLOD3-204ENST00000424135 ITGA3P26006 1051 aa11.27□□□□□ -0.61
PLOD3-204ENST00000424135 SHMT2P34897 504 aa11.27□□□□□ -0.61
PLOD3-204ENST00000424135 GRIA3P42263 894 aa11.27□□□□□ -0.61
PLOD3-204ENST00000424135 HADHBP55084 474 aaKnown RBP11.27□□□□□ -0.61
PLOD3-204ENST00000424135 SRSF11Q05519 484 aaKnown RBP11.27□□□□□ -0.61
PLOD3-204ENST00000424135 POU6F1Q14863 301 aa11.27□□□□□ -0.61
PLOD3-204ENST00000424135 CYP2A13Q16696 494 aa11.27□□□□□ -0.61
PLOD3-204ENST00000424135 GPR33Q49SQ1 333 aa11.27□□□□□ -0.61
PLOD3-204ENST00000424135 KCTD11Q693B1 232 aa11.27□□□□□ -0.61
PLOD3-204ENST00000424135 KIRREL2Q6UWL6 708 aa11.27□□□□□ -0.61
PLOD3-204ENST00000424135 TAX1BP1Q86VP1 789 aa11.27□□□□□ -0.61
PLOD3-204ENST00000424135 HOOK3Q86VS8 718 aa11.27□□□□□ -0.61
PLOD3-204ENST00000424135 VRK3Q8IV63 474 aa11.27□□□□□ -0.61
PLOD3-204ENST00000424135 PARP9Q8IXQ6 854 aa11.27□□□□□ -0.61
PLOD3-204ENST00000424135 KLHDC8BQ8IXV7 354 aa11.27□□□□□ -0.61
PLOD3-204ENST00000424135 ZADH2Q8N4Q0 377 aa11.27□□□□□ -0.61
PLOD3-204ENST00000424135 TAB3Q8N5C8 712 aaPredicted RBP11.27□□□□□ -0.61
PLOD3-204ENST00000424135 ST6GALNAC3Q8NDV1 305 aa11.27□□□□□ -0.61
PLOD3-204ENST00000424135 CATSPER1Q8NEC5 780 aa11.27□□□□□ -0.61
PLOD3-204ENST00000424135 PROKR1Q8TCW9 393 aa11.27□□□□□ -0.61
PLOD3-204ENST00000424135 ELMO1Q92556 727 aa11.27□□□□□ -0.61
PLOD3-204ENST00000424135 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.27□□□□□ -0.61
PLOD3-204ENST00000424135 IP6K3Q96PC2 410 aa11.27□□□□□ -0.61
PLOD3-204ENST00000424135 IL17FQ96PD4 163 aa11.27□□□□□ -0.61
PLOD3-204ENST00000424135 SPSB2Q99619 263 aa11.27□□□□□ -0.61
PLOD3-204ENST00000424135 WDR77Q9BQA1 342 aaPredicted RBP11.27□□□□□ -0.61
PLOD3-204ENST00000424135 MENTQ9BUN1 341 aa11.27□□□□□ -0.61
PLOD3-204ENST00000424135 AP1M1Q9BXS5 423 aa11.27□□□□□ -0.61
PLOD3-204ENST00000424135 CHRNA10Q9GZZ6 450 aa11.27□□□□□ -0.61
PLOD3-204ENST00000424135 ARNT2Q9HBZ2 717 aa11.27□□□□□ -0.61
PLOD3-204ENST00000424135 ATP13A2Q9NQ11 1180 aa11.27□□□□□ -0.61
PLOD3-204ENST00000424135 NLE1Q9NVX2 485 aaPredicted RBP11.27□□□□□ -0.61
PLOD3-204ENST00000424135 IRAK4Q9NWZ3 460 aa11.27□□□□□ -0.61
PLOD3-204ENST00000424135 EURLQ9NYK6 297 aa11.27□□□□□ -0.61
PLOD3-204ENST00000424135 IMPACTQ9P2X3 320 aa11.27□□□□□ -0.61
PLOD3-204ENST00000424135 CTSFQ9UBX1 484 aa11.27□□□□□ -0.61
PLOD3-204ENST00000424135 AAR2Q9Y312 384 aaKnown RBP11.27□□□□□ -0.61
PLOD3-204ENST00000424135 HS3ST3B1Q9Y662 390 aa11.27□□□□□ -0.61
PLOD3-204ENST00000424135 DCHS2Q6V1P9 2916 aa11.27□□□□□ -0.61
PLOD3-204ENST00000424135 SVILO95425 2214 aa11.27□□□□□ -0.61
PLOD3-204ENST00000424135 ADGRG4Q8IZF6 3080 aa11.26□□□□□ -0.61
PLOD3-204ENST00000424135 CCDC162PA2VCL2 907 aa11.26□□□□□ -0.61
PLOD3-204ENST00000424135 KRT87PA6NCN2 255 aa11.26□□□□□ -0.61
PLOD3-204ENST00000424135 ISM1B1AKI9 464 aa11.26□□□□□ -0.61
PLOD3-204ENST00000424135 H7C0S8 307 aa11.26□□□□□ -0.61
PLOD3-204ENST00000424135 NRP2O60462 931 aa11.26□□□□□ -0.61
PLOD3-204ENST00000424135 OR1D4P47884 311 aa11.26□□□□□ -0.61
PLOD3-204ENST00000424135 CACNG1Q06432 222 aa11.26□□□□□ -0.61
PLOD3-204ENST00000424135 TBX2Q13207 712 aaPredicted RBP11.26□□□□□ -0.61
PLOD3-204ENST00000424135 TRIM14Q14142 442 aa11.26□□□□□ -0.61
PLOD3-204ENST00000424135 ELOAQ14241 798 aaKnown RBP11.26□□□□□ -0.61
PLOD3-204ENST00000424135 GRB7Q14451 532 aa11.26□□□□□ -0.61
PLOD3-204ENST00000424135 PRPSAP1Q14558 356 aa11.26□□□□□ -0.61
PLOD3-204ENST00000424135 NKG7Q16617 165 aa11.26□□□□□ -0.61
PLOD3-204ENST00000424135 CCDC38Q502W7 563 aa11.26□□□□□ -0.61
PLOD3-204ENST00000424135 CCDC181Q5TID7 509 aa11.26□□□□□ -0.61
PLOD3-204ENST00000424135 FCRL6Q6DN72 434 aa11.26□□□□□ -0.61
PLOD3-204ENST00000424135 TLDC1Q6P9B6 456 aa11.26□□□□□ -0.61
PLOD3-204ENST00000424135 DARS2Q6PI48 645 aaKnown RBP11.26□□□□□ -0.61
PLOD3-204ENST00000424135 IGFL2Q6UWQ7 119 aa11.26□□□□□ -0.61
PLOD3-204ENST00000424135 TTLL10Q6ZVT0 673 aa11.26□□□□□ -0.61
PLOD3-204ENST00000424135 MCATQ8IVS2 390 aaKnown RBP11.26□□□□□ -0.61
PLOD3-204ENST00000424135 CDKL3Q8IVW4 592 aaPredicted RBP11.26□□□□□ -0.61
PLOD3-204ENST00000424135 DNAJB14Q8TBM8 379 aa11.26□□□□□ -0.61
PLOD3-204ENST00000424135 LKAAEAR1Q8TD35 194 aa11.26□□□□□ -0.61
PLOD3-204ENST00000424135 HEXDCQ8WVB3 486 aa11.26□□□□□ -0.61
PLOD3-204ENST00000424135 OSBPL8Q9BZF1 889 aa11.26□□□□□ -0.61
PLOD3-204ENST00000424135 UNKQ9C0B0 810 aaKnown RBP11.26□□□□□ -0.61
PLOD3-204ENST00000424135 SOX17Q9H6I2 414 aaPredicted RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms