RNA–Protein interactions for RNA: ENST00000423945.5

SBDSP1-202, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 3 BASIC

Gene SBDSP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-202ENST00000423945 FAM136AQ96C01 138 aa17.24■□□□□ 0.35
SBDSP1-202ENST00000423945 STAMBPL1Q96FJ0 436 aa17.24■□□□□ 0.35
SBDSP1-202ENST00000423945 IL17FQ96PD4 163 aa17.24■□□□□ 0.35
SBDSP1-202ENST00000423945 LHX9Q9NQ69 397 aa17.24■□□□□ 0.35
SBDSP1-202ENST00000423945 LATS2Q9NRM7 1088 aa17.24■□□□□ 0.35
SBDSP1-202ENST00000423945 OR6C2Q9NZP2 312 aa17.24■□□□□ 0.35
SBDSP1-202ENST00000423945 MED16Q9Y2X0 877 aa17.24■□□□□ 0.35
SBDSP1-202ENST00000423945 SCRG1O75711 98 aa17.23■□□□□ 0.35
SBDSP1-202ENST00000423945 ESR1P03372 595 aa17.23■□□□□ 0.35
SBDSP1-202ENST00000423945 PAMP19021 973 aa17.23■□□□□ 0.35
SBDSP1-202ENST00000423945 OAS2P29728 719 aaKnown RBP17.23■□□□□ 0.35
SBDSP1-202ENST00000423945 BDKRB1P46663 353 aa17.23■□□□□ 0.35
SBDSP1-202ENST00000423945 CDC20Q12834 499 aa17.23■□□□□ 0.35
SBDSP1-202ENST00000423945 GPS2Q13227 327 aa17.23■□□□□ 0.35
SBDSP1-202ENST00000423945 CTBP1Q13363 440 aa17.23■□□□□ 0.35
SBDSP1-202ENST00000423945 ZNF470Q6ECI4 717 aa17.23■□□□□ 0.35
SBDSP1-202ENST00000423945 ZNF549Q6P9A3 640 aa17.23■□□□□ 0.35
SBDSP1-202ENST00000423945 FAM199XQ6PEV8 388 aaPredicted RBP17.23■□□□□ 0.35
SBDSP1-202ENST00000423945 OTOAQ7RTW8 1153 aa17.23■□□□□ 0.35
SBDSP1-202ENST00000423945 FAM20CQ8IXL6 584 aa17.23■□□□□ 0.35
SBDSP1-202ENST00000423945 C19orf47Q8N9M1 422 aaKnown RBP17.23■□□□□ 0.35
SBDSP1-202ENST00000423945 OR8K5Q8NH50 307 aa17.23■□□□□ 0.35
SBDSP1-202ENST00000423945 SLC30A3Q99726 388 aa17.23■□□□□ 0.35
SBDSP1-202ENST00000423945 PLAC1Q9HBJ0 212 aa17.23■□□□□ 0.35
SBDSP1-202ENST00000423945 FBXO6Q9NRD1 293 aaPredicted RBP17.23■□□□□ 0.35
SBDSP1-202ENST00000423945 ASIC3Q9UHC3 531 aa17.23■□□□□ 0.35
SBDSP1-202ENST00000423945 PADI1Q9ULC6 663 aa17.23■□□□□ 0.35
SBDSP1-202ENST00000423945 SAR1BQ9Y6B6 198 aa17.23■□□□□ 0.35
SBDSP1-202ENST00000423945 MAD1L1Q9Y6D9 718 aa17.23■□□□□ 0.35
SBDSP1-202ENST00000423945 FAM169AQ9Y6X4 670 aa17.23■□□□□ 0.35
SBDSP1-202ENST00000423945 SEC16AO15027 2179 aa17.23■□□□□ 0.35
SBDSP1-202ENST00000423945 HELZ2Q9BYK8 2649 aaKnown RBP17.23■□□□□ 0.35
SBDSP1-202ENST00000423945 TMEM150CB9EJG8 249 aa17.22■□□□□ 0.35
SBDSP1-202ENST00000423945 H3BMH7 237 aa17.22■□□□□ 0.35
SBDSP1-202ENST00000423945 C1orf105O95561 183 aa17.22■□□□□ 0.35
SBDSP1-202ENST00000423945 MT-ND3P03897 115 aa17.22■□□□□ 0.35
SBDSP1-202ENST00000423945 CTSBP07858 339 aa17.22■□□□□ 0.35
SBDSP1-202ENST00000423945 FURINP09958 794 aa17.22■□□□□ 0.35
SBDSP1-202ENST00000423945 FAM87AP0C7U9 286 aa17.22■□□□□ 0.35
SBDSP1-202ENST00000423945 PRKAR1AP10644 381 aa17.22■□□□□ 0.35
SBDSP1-202ENST00000423945 PKMP14618 531 aaKnown RBP17.22■□□□□ 0.35
SBDSP1-202ENST00000423945 SLC1A2P43004 574 aa17.22■□□□□ 0.35
SBDSP1-202ENST00000423945 RAB28P51157 221 aa17.22■□□□□ 0.35
SBDSP1-202ENST00000423945 DHX9Q08211 1270 aaKnown RBP17.22■□□□□ 0.35
SBDSP1-202ENST00000423945 SLC5A12Q1EHB4 618 aa17.22■□□□□ 0.35
SBDSP1-202ENST00000423945 IZUMO3Q5VZ72 239 aa17.22■□□□□ 0.35
SBDSP1-202ENST00000423945 LCN10Q6JVE6 187 aa17.22■□□□□ 0.35
SBDSP1-202ENST00000423945 ZNF517Q6ZMY9 492 aaPredicted RBP17.22■□□□□ 0.35
SBDSP1-202ENST00000423945 TMEM126BQ8IUX1 230 aa17.22■□□□□ 0.35
SBDSP1-202ENST00000423945 IGDCC3Q8IVU1 814 aa17.22■□□□□ 0.35
SBDSP1-202ENST00000423945 KLHL7Q8IXQ5 586 aa17.22■□□□□ 0.35
SBDSP1-202ENST00000423945 C2orf73Q8N5S3 287 aaPredicted RBP17.22■□□□□ 0.35
SBDSP1-202ENST00000423945 DENND1AQ8TEH3 1009 aa17.22■□□□□ 0.35
SBDSP1-202ENST00000423945 MED8Q96G25 268 aa17.22■□□□□ 0.35
SBDSP1-202ENST00000423945 PWWP2AQ96N64 755 aa17.22■□□□□ 0.35
SBDSP1-202ENST00000423945 EFHD1Q9BUP0 239 aa17.22■□□□□ 0.35
SBDSP1-202ENST00000423945 INTS10Q9NVR2 710 aaKnown RBP17.22■□□□□ 0.35
SBDSP1-202ENST00000423945 PCDHB3Q9Y5E6 796 aa17.22■□□□□ 0.35
SBDSP1-202ENST00000423945 PCDHGA6Q9Y5G7 932 aa17.22■□□□□ 0.35
SBDSP1-202ENST00000423945 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.22■□□□□ 0.35
SBDSP1-202ENST00000423945 TLN1Q9Y490 2541 aaKnown RBP17.22■□□□□ 0.35
SBDSP1-202ENST00000423945 ZNF462Q96JM2 2506 aa17.21■□□□□ 0.35
SBDSP1-202ENST00000423945 A0A0J9YY10 115 aa17.21■□□□□ 0.35
SBDSP1-202ENST00000423945 RASGRF2O14827 1237 aa17.21■□□□□ 0.35
SBDSP1-202ENST00000423945 KPNA5O15131 536 aa17.21■□□□□ 0.35
SBDSP1-202ENST00000423945 TP73O15350 636 aa17.21■□□□□ 0.35
SBDSP1-202ENST00000423945 PRICKLE3O43900 615 aaPredicted RBP17.21■□□□□ 0.35
SBDSP1-202ENST00000423945 CPNE3O75131 537 aaKnown RBP17.21■□□□□ 0.35
SBDSP1-202ENST00000423945 MATN4O95460 622 aa17.21■□□□□ 0.35
SBDSP1-202ENST00000423945 TCN2P20062 427 aa17.21■□□□□ 0.35
SBDSP1-202ENST00000423945 CLCN7P51798 805 aa17.21■□□□□ 0.35
SBDSP1-202ENST00000423945 DNASE1L3Q13609 305 aa17.21■□□□□ 0.35
SBDSP1-202ENST00000423945 KIR2DS3Q14952 304 aa17.21■□□□□ 0.35
SBDSP1-202ENST00000423945 LONRF1Q17RB8 773 aa17.21■□□□□ 0.35
SBDSP1-202ENST00000423945 DEFB110Q30KQ9 67 aa17.21■□□□□ 0.35
SBDSP1-202ENST00000423945 CRTC2Q53ET0 693 aaPredicted RBP17.21■□□□□ 0.35
SBDSP1-202ENST00000423945 ACSBG2Q5FVE4 666 aa17.21■□□□□ 0.35
SBDSP1-202ENST00000423945 HOOK3Q86VS8 718 aa17.21■□□□□ 0.35
SBDSP1-202ENST00000423945 C17orf53Q8N3J3 647 aaPredicted RBP17.21■□□□□ 0.35
SBDSP1-202ENST00000423945 OR2L8Q8NGY9 312 aa17.21■□□□□ 0.35
SBDSP1-202ENST00000423945 GIMAP7Q8NHV1 300 aa17.21■□□□□ 0.35
SBDSP1-202ENST00000423945 WDR83Q9BRX9 315 aaKnown RBP17.21■□□□□ 0.35
SBDSP1-202ENST00000423945 TRIM51Q9BSJ1 452 aa17.21■□□□□ 0.35
SBDSP1-202ENST00000423945 CHRNA10Q9GZZ6 450 aa17.21■□□□□ 0.35
SBDSP1-202ENST00000423945 SYTL2Q9HCH5 934 aa17.21■□□□□ 0.35
SBDSP1-202ENST00000423945 C20orf96Q9NUD7 363 aaPredicted RBP17.21■□□□□ 0.35
SBDSP1-202ENST00000423945 TSR3Q9UJK0 312 aaKnown RBP17.21■□□□□ 0.35
SBDSP1-202ENST00000423945 CTAGE9A4FU28 777 aa17.2■□□□□ 0.34
SBDSP1-202ENST00000423945 ISM1B1AKI9 464 aa17.2■□□□□ 0.34
SBDSP1-202ENST00000423945 H3BMM5 538 aa17.2■□□□□ 0.34
SBDSP1-202ENST00000423945 RPN2P04844 631 aa17.2■□□□□ 0.34
SBDSP1-202ENST00000423945 CCNYL3P0C7X3 344 aa17.2■□□□□ 0.34
SBDSP1-202ENST00000423945 CHRM3P20309 590 aa17.2■□□□□ 0.34
SBDSP1-202ENST00000423945 CD9P21926 228 aa17.2■□□□□ 0.34
SBDSP1-202ENST00000423945 ATP5DP30049 168 aa17.2■□□□□ 0.34
SBDSP1-202ENST00000423945 RORAP35398 523 aa17.2■□□□□ 0.34
SBDSP1-202ENST00000423945 MPP1Q00013 466 aa17.2■□□□□ 0.34
SBDSP1-202ENST00000423945 C19orf57Q0VDD7 668 aa17.2■□□□□ 0.34
SBDSP1-202ENST00000423945 THOC5Q13769 683 aaKnown RBP17.2■□□□□ 0.34
SBDSP1-202ENST00000423945 CRYMQ14894 314 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms