RNA–Protein interactions for RNA: ENST00000422491.6

USP54-204, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 1 (best) BASIC

Gene USP54, Length 2,777 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-204ENST00000422491 RPLP0P05388 317 aaKnown RBP10.48□□□□□ -0.73
USP54-204ENST00000422491 C21orf33P30042 268 aaPredicted RBP10.48□□□□□ -0.73
USP54-204ENST00000422491 HTR7P34969 479 aa10.48□□□□□ -0.73
USP54-204ENST00000422491 SLC15A1P46059 708 aa10.48□□□□□ -0.73
USP54-204ENST00000422491 CREMQ03060 361 aa10.48□□□□□ -0.73
USP54-204ENST00000422491 RAD51Q06609 339 aa10.48□□□□□ -0.73
USP54-204ENST00000422491 SLC10A7Q0GE19 358 aa10.48□□□□□ -0.73
USP54-204ENST00000422491 TTLL4Q14679 1199 aa10.48□□□□□ -0.73
USP54-204ENST00000422491 MAPKAPK3Q16644 382 aa10.48□□□□□ -0.73
USP54-204ENST00000422491 TIGD6Q17RP2 521 aa10.48□□□□□ -0.73
USP54-204ENST00000422491 AP5B1Q2VPB7 878 aa10.48□□□□□ -0.73
USP54-204ENST00000422491 FAM174BQ3ZCQ3 159 aa10.48□□□□□ -0.73
USP54-204ENST00000422491 GTDC1Q4AE62 458 aa10.48□□□□□ -0.73
USP54-204ENST00000422491 YIF1BQ5BJH7 314 aa10.48□□□□□ -0.73
USP54-204ENST00000422491 Q5BKY6 102 aa10.48□□□□□ -0.73
USP54-204ENST00000422491 KIAA1614Q5VZ46 1190 aa10.48□□□□□ -0.73
USP54-204ENST00000422491 IL27RAQ6UWB1 636 aa10.48□□□□□ -0.73
USP54-204ENST00000422491 NRARPQ7Z6K4 114 aa10.48□□□□□ -0.73
USP54-204ENST00000422491 RTL3Q8N8U3 475 aaKnown RBP10.48□□□□□ -0.73
USP54-204ENST00000422491 KBTBD8Q8NFY9 601 aa10.48□□□□□ -0.73
USP54-204ENST00000422491 ANGPTL6Q8NI99 470 aa10.48□□□□□ -0.73
USP54-204ENST00000422491 TADA1Q96BN2 335 aa10.48□□□□□ -0.73
USP54-204ENST00000422491 FCRL2Q96LA5 508 aaPredicted RBP10.48□□□□□ -0.73
USP54-204ENST00000422491 OR2A14Q96R47 310 aa10.48□□□□□ -0.73
USP54-204ENST00000422491 PITX2Q99697 317 aa10.48□□□□□ -0.73
USP54-204ENST00000422491 SH3GL1Q99961 368 aa10.48□□□□□ -0.73
USP54-204ENST00000422491 MYOCQ99972 504 aa10.48□□□□□ -0.73
USP54-204ENST00000422491 QTRT2Q9H974 415 aaKnown RBP10.48□□□□□ -0.73
USP54-204ENST00000422491 CATSPERZQ9NTU4 200 aa10.48□□□□□ -0.73
USP54-204ENST00000422491 C14orf119Q9NWQ9 140 aa10.48□□□□□ -0.73
USP54-204ENST00000422491 TAS2R9Q9NYW1 312 aa10.48□□□□□ -0.73
USP54-204ENST00000422491 MPP6Q9NZW5 540 aa10.48□□□□□ -0.73
USP54-204ENST00000422491 LYVE1Q9Y5Y7 322 aa10.48□□□□□ -0.73
USP54-204ENST00000422491 DNAJC25-GNG10A0A024R161 153 aa10.47□□□□□ -0.73
USP54-204ENST00000422491 PNMA8CA0A1B0GUJ8 204 aa10.47□□□□□ -0.73
USP54-204ENST00000422491 LOC285095A0A1B0GVY8 99 aa10.47□□□□□ -0.73
USP54-204ENST00000422491 MUSKO15146 869 aa10.47□□□□□ -0.73
USP54-204ENST00000422491 IRAK2O43187 625 aa10.47□□□□□ -0.73
USP54-204ENST00000422491 ICMTO60725 284 aa10.47□□□□□ -0.73
USP54-204ENST00000422491 RPP40O75818 363 aaKnown RBP10.47□□□□□ -0.73
USP54-204ENST00000422491 CAPN1P07384 714 aa10.47□□□□□ -0.73
USP54-204ENST00000422491 AKT1P31749 480 aa10.47□□□□□ -0.73
USP54-204ENST00000422491 RENBPP51606 427 aa10.47□□□□□ -0.73
USP54-204ENST00000422491 ITKQ08881 620 aa10.47□□□□□ -0.73
USP54-204ENST00000422491 PTGR1Q14914 329 aa10.47□□□□□ -0.73
USP54-204ENST00000422491 CEP78Q5JTW2 689 aa10.47□□□□□ -0.73
USP54-204ENST00000422491 GCNT7Q6ZNI0 430 aa10.47□□□□□ -0.73
USP54-204ENST00000422491 ENTHD1Q8IYW4 607 aa10.47□□□□□ -0.73
USP54-204ENST00000422491 OR13C4Q8NGS5 318 aa10.47□□□□□ -0.73
USP54-204ENST00000422491 ELMO1Q92556 727 aa10.47□□□□□ -0.73
USP54-204ENST00000422491 PEX13Q92968 403 aa10.47□□□□□ -0.73
USP54-204ENST00000422491 KLHL5Q96PQ7 755 aa10.47□□□□□ -0.73
USP54-204ENST00000422491 NEDD4LQ96PU5 975 aa10.47□□□□□ -0.73
USP54-204ENST00000422491 TTYH2Q9BSA4 534 aa10.47□□□□□ -0.73
USP54-204ENST00000422491 C16orf70Q9BSU1 422 aa10.47□□□□□ -0.73
USP54-204ENST00000422491 CCDC32Q9BV29 185 aa10.47□□□□□ -0.73
USP54-204ENST00000422491 SLC6A13Q9NSD5 602 aa10.47□□□□□ -0.73
USP54-204ENST00000422491 TAS2R13Q9NYV9 303 aa10.47□□□□□ -0.73
USP54-204ENST00000422491 UXTQ9UBK9 157 aaPredicted RBP10.47□□□□□ -0.73
USP54-204ENST00000422491 LOC110117498-PIK3R3F6TDL0 507 aa10.47□□□□□ -0.73
USP54-204ENST00000422491 J3KR12 359 aa10.47□□□□□ -0.73
USP54-204ENST00000422491 TSPAN12O95859 305 aa10.47□□□□□ -0.73
USP54-204ENST00000422491 UGT2B15P54855 530 aa10.47□□□□□ -0.73
USP54-204ENST00000422491 DUSP7Q16829 419 aa10.47□□□□□ -0.73
USP54-204ENST00000422491 SPANXN2Q5MJ10 180 aa10.47□□□□□ -0.73
USP54-204ENST00000422491 WDR45BQ5MNZ6 344 aa10.47□□□□□ -0.73
USP54-204ENST00000422491 ATG9BQ674R7 924 aa10.47□□□□□ -0.73
USP54-204ENST00000422491 OR2T5Q6IEZ7 315 aa10.47□□□□□ -0.73
USP54-204ENST00000422491 ZNF517Q6ZMY9 492 aaPredicted RBP10.47□□□□□ -0.73
USP54-204ENST00000422491 OR2T29Q8NH02 315 aa10.47□□□□□ -0.73
USP54-204ENST00000422491 OR4L1Q8NH43 312 aa10.47□□□□□ -0.73
USP54-204ENST00000422491 GRPEL2Q8TAA5 225 aa10.47□□□□□ -0.73
USP54-204ENST00000422491 METTL6Q8TCB7 284 aa10.47□□□□□ -0.73
USP54-204ENST00000422491 PIK3R3Q92569 461 aa10.47□□□□□ -0.73
USP54-204ENST00000422491 Q96MT0 163 aa10.47□□□□□ -0.73
USP54-204ENST00000422491 COPS4Q9BT78 406 aa10.47□□□□□ -0.73
USP54-204ENST00000422491 CENPOQ9BU64 300 aa10.47□□□□□ -0.73
USP54-204ENST00000422491 OR51E2Q9H255 320 aa10.47□□□□□ -0.73
USP54-204ENST00000422491 AGO3Q9H9G7 860 aaKnown RBP10.47□□□□□ -0.73
USP54-204ENST00000422491 WDR70Q9NW82 654 aa10.47□□□□□ -0.73
USP54-204ENST00000422491 C1orf109Q9NX04 203 aa10.47□□□□□ -0.73
USP54-204ENST00000422491 CCL27Q9Y4X3 112 aa10.47□□□□□ -0.73
USP54-204ENST00000422491 UBA6A0AVT1 1052 aaPredicted RBP10.46□□□□□ -0.73
USP54-204ENST00000422491 ARHGAP33O14559 1287 aa10.46□□□□□ -0.73
USP54-204ENST00000422491 PIK3CBP42338 1070 aa10.46□□□□□ -0.73
USP54-204ENST00000422491 NRG1Q02297 640 aaPredicted RBP10.46□□□□□ -0.73
USP54-204ENST00000422491 TBRG1Q3YBR2 411 aa10.46□□□□□ -0.73
USP54-204ENST00000422491 SPANXN4Q5MJ08 99 aa10.46□□□□□ -0.73
USP54-204ENST00000422491 NEK5Q6P3R8 708 aa10.46□□□□□ -0.73
USP54-204ENST00000422491 ZNF438Q7Z4V0 828 aa10.46□□□□□ -0.73
USP54-204ENST00000422491 TCAIMQ8N3R3 496 aa10.46□□□□□ -0.73
USP54-204ENST00000422491 PGBD5Q8N414 524 aa10.46□□□□□ -0.73
USP54-204ENST00000422491 ANKK1Q8NFD2 765 aa10.46□□□□□ -0.73
USP54-204ENST00000422491 ARRDC2Q8TBH0 407 aa10.46□□□□□ -0.73
USP54-204ENST00000422491 JPH3Q8WXH2 748 aaPredicted RBP10.46□□□□□ -0.73
USP54-204ENST00000422491 POP5Q969H6 163 aaKnown RBP10.46□□□□□ -0.73
USP54-204ENST00000422491 TRIM63Q969Q1 353 aa10.46□□□□□ -0.73
USP54-204ENST00000422491 CDCA5Q96FF9 252 aa10.46□□□□□ -0.73
USP54-204ENST00000422491 GPR21Q99679 349 aa10.46□□□□□ -0.73
USP54-204ENST00000422491 IRF2BPLQ9H1B7 796 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms