RNA–Protein interactions for RNA: ENST00000422344.5

TRAF4-204, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-204ENST00000422344 SYTL2Q9HCH5 934 aa21.2■□□□□ 0.98
TRAF4-204ENST00000422344 INTS10Q9NVR2 710 aaKnown RBP21.2■□□□□ 0.98
TRAF4-204ENST00000422344 PCYOX1Q9UHG3 505 aa21.2■□□□□ 0.98
TRAF4-204ENST00000422344 PADI1Q9ULC6 663 aa21.2■□□□□ 0.98
TRAF4-204ENST00000422344 CRYL1Q9Y2S2 319 aa21.2■□□□□ 0.98
TRAF4-204ENST00000422344 MRFAP1Q9Y605 127 aa21.2■□□□□ 0.98
TRAF4-204ENST00000422344 ISM1B1AKI9 464 aa21.19■□□□□ 0.98
TRAF4-204ENST00000422344 CPNE3O75131 537 aaKnown RBP21.19■□□□□ 0.98
TRAF4-204ENST00000422344 PVRP15151 417 aa21.19■□□□□ 0.98
TRAF4-204ENST00000422344 UGT2B7P16662 529 aa21.19■□□□□ 0.98
TRAF4-204ENST00000422344 CHRM3P20309 590 aa21.19■□□□□ 0.98
TRAF4-204ENST00000422344 PAFAH1B1P43034 410 aa21.19■□□□□ 0.98
TRAF4-204ENST00000422344 RAB28P51157 221 aa21.19■□□□□ 0.98
TRAF4-204ENST00000422344 CTSL3PQ5NE16 218 aa21.19■□□□□ 0.98
TRAF4-204ENST00000422344 PLEKHS1Q5SXH7 462 aa21.19■□□□□ 0.98
TRAF4-204ENST00000422344 TMEM135Q86UB9 458 aa21.19■□□□□ 0.98
TRAF4-204ENST00000422344 CILP2Q8IUL8 1156 aa21.19■□□□□ 0.98
TRAF4-204ENST00000422344 KLHL7Q8IXQ5 586 aa21.19■□□□□ 0.98
TRAF4-204ENST00000422344 SLCO2A1Q92959 643 aa21.19■□□□□ 0.98
TRAF4-204ENST00000422344 ZNF501Q96CX3 271 aaPredicted RBP21.19■□□□□ 0.98
TRAF4-204ENST00000422344 FOPNLQ96NB1 174 aa21.19■□□□□ 0.98
TRAF4-204ENST00000422344 BIRC8Q96P09 236 aa21.19■□□□□ 0.98
TRAF4-204ENST00000422344 TRAPPC9Q96Q05 1148 aa21.19■□□□□ 0.98
TRAF4-204ENST00000422344 KLHL25Q9H0H3 589 aa21.19■□□□□ 0.98
TRAF4-204ENST00000422344 C20orf96Q9NUD7 363 aaPredicted RBP21.19■□□□□ 0.98
TRAF4-204ENST00000422344 IL1RAPL1Q9NZN1 696 aa21.19■□□□□ 0.98
TRAF4-204ENST00000422344 CROTQ9UKG9 612 aa21.19■□□□□ 0.98
TRAF4-204ENST00000422344 E5RI56 91 aa21.18■□□□□ 0.98
TRAF4-204ENST00000422344 DNALI1O14645 258 aaPredicted RBP21.18■□□□□ 0.98
TRAF4-204ENST00000422344 NIPSNAP2O75323 286 aa21.18■□□□□ 0.98
TRAF4-204ENST00000422344 USP1O94782 785 aa21.18■□□□□ 0.98
TRAF4-204ENST00000422344 NTRK1P04629 796 aa21.18■□□□□ 0.98
TRAF4-204ENST00000422344 MAGEA3P43357 314 aa21.18■□□□□ 0.98
TRAF4-204ENST00000422344 ADARP55265 1226 aaKnown RBP21.18■□□□□ 0.98
TRAF4-204ENST00000422344 LONRF1Q17RB8 773 aa21.18■□□□□ 0.98
TRAF4-204ENST00000422344 IZUMO3Q5VZ72 239 aa21.18■□□□□ 0.98
TRAF4-204ENST00000422344 SYDE1Q6ZW31 735 aaPredicted RBP21.18■□□□□ 0.98
TRAF4-204ENST00000422344 TRIM73Q86UV7 250 aa21.18■□□□□ 0.98
TRAF4-204ENST00000422344 RAB42Q8N4Z0 105 aa21.18■□□□□ 0.98
TRAF4-204ENST00000422344 CALML6Q8TD86 181 aa21.18■□□□□ 0.98
TRAF4-204ENST00000422344 STARD8Q92502 1023 aa21.18■□□□□ 0.98
TRAF4-204ENST00000422344 N4BP2L2Q92802 583 aaPredicted RBP21.18■□□□□ 0.98
TRAF4-204ENST00000422344 CATSPER2Q96P56 530 aa21.18■□□□□ 0.98
TRAF4-204ENST00000422344 CCDC68Q9H2F9 335 aa21.18■□□□□ 0.98
TRAF4-204ENST00000422344 LATS2Q9NRM7 1088 aa21.18■□□□□ 0.98
TRAF4-204ENST00000422344 KCND3Q9UK17 655 aa21.18■□□□□ 0.98
TRAF4-204ENST00000422344 SLC39A10Q9ULF5 831 aa21.18■□□□□ 0.98
TRAF4-204ENST00000422344 DOPEY2Q9Y3R5 2298 aa21.17■□□□□ 0.98
TRAF4-204ENST00000422344 TMEM150CB9EJG8 249 aa21.17■□□□□ 0.98
TRAF4-204ENST00000422344 KATNA1O75449 491 aa21.17■□□□□ 0.98
TRAF4-204ENST00000422344 TPBGLP0DKB5 382 aa21.17■□□□□ 0.98
TRAF4-204ENST00000422344 PRKAR1AP10644 381 aa21.17■□□□□ 0.98
TRAF4-204ENST00000422344 PKMP14618 531 aaKnown RBP21.17■□□□□ 0.98
TRAF4-204ENST00000422344 TCN2P20062 427 aa21.17■□□□□ 0.98
TRAF4-204ENST00000422344 PKLRP30613 574 aa21.17■□□□□ 0.98
TRAF4-204ENST00000422344 DR1Q01658 176 aa21.17■□□□□ 0.98
TRAF4-204ENST00000422344 KIR2DS3Q14952 304 aa21.17■□□□□ 0.98
TRAF4-204ENST00000422344 KYNUQ16719 465 aa21.17■□□□□ 0.98
TRAF4-204ENST00000422344 CENPUQ71F23 418 aa21.17■□□□□ 0.98
TRAF4-204ENST00000422344 CREG2Q8IUH2 290 aa21.17■□□□□ 0.98
TRAF4-204ENST00000422344 LMNTD2Q8IXW0 634 aa21.17■□□□□ 0.98
TRAF4-204ENST00000422344 C19orf47Q8N9M1 422 aaKnown RBP21.17■□□□□ 0.98
TRAF4-204ENST00000422344 SERBP1Q8NC51 408 aaKnown RBP eCLIP21.17■□□□□ 0.98
TRAF4-204ENST00000422344 FAM136AQ96C01 138 aa21.17■□□□□ 0.98
TRAF4-204ENST00000422344 SIGLEC10Q96LC7 697 aa21.17■□□□□ 0.98
TRAF4-204ENST00000422344 OR2A14Q96R47 310 aa21.17■□□□□ 0.98
TRAF4-204ENST00000422344 RAB11FIP5Q9BXF6 653 aa21.17■□□□□ 0.98
TRAF4-204ENST00000422344 LHX9Q9NQ69 397 aa21.17■□□□□ 0.98
TRAF4-204ENST00000422344 SPHK1Q9NYA1 384 aa21.17■□□□□ 0.98
TRAF4-204ENST00000422344 CIDEBQ9UHD4 219 aa21.17■□□□□ 0.98
TRAF4-204ENST00000422344 SERTAD3Q9UJW9 196 aa21.17■□□□□ 0.98
TRAF4-204ENST00000422344 PCDHB3Q9Y5E6 796 aa21.17■□□□□ 0.98
TRAF4-204ENST00000422344 A0A0J9YY10 115 aa21.16■□□□□ 0.98
TRAF4-204ENST00000422344 ZCWPW2A0A1B0GU75 182 aa21.16■□□□□ 0.98
TRAF4-204ENST00000422344 NKX2-8O15522 239 aa21.16■□□□□ 0.98
TRAF4-204ENST00000422344 PGAM1P18669 254 aa21.16■□□□□ 0.98
TRAF4-204ENST00000422344 CYP2A7P20853 494 aa21.16■□□□□ 0.98
TRAF4-204ENST00000422344 CDC20Q12834 499 aa21.16■□□□□ 0.98
TRAF4-204ENST00000422344 C16orf46Q6P387 395 aa21.16■□□□□ 0.98
TRAF4-204ENST00000422344 BORAQ6PGQ7 559 aa21.16■□□□□ 0.98
TRAF4-204ENST00000422344 CNSTQ6PJW8 725 aa21.16■□□□□ 0.98
TRAF4-204ENST00000422344 ZBTB2Q8N680 514 aa21.16■□□□□ 0.98
TRAF4-204ENST00000422344 GABPB2Q8TAK5 448 aaPredicted RBP21.16■□□□□ 0.98
TRAF4-204ENST00000422344 RAD51AP1Q96B01 352 aa21.16■□□□□ 0.98
TRAF4-204ENST00000422344 SLC22A18Q96BI1 424 aa21.16■□□□□ 0.98
TRAF4-204ENST00000422344 TCTN2Q96GX1 697 aa21.16■□□□□ 0.98
TRAF4-204ENST00000422344 FAM167BQ9BTA0 163 aa21.16■□□□□ 0.98
TRAF4-204ENST00000422344 SLC7A5P2Q9GIP4 190 aa21.16■□□□□ 0.98
TRAF4-204ENST00000422344 SLC25A18Q9H1K4 315 aa21.16■□□□□ 0.98
TRAF4-204ENST00000422344 TSR3Q9UJK0 312 aaKnown RBP21.16■□□□□ 0.98
TRAF4-204ENST00000422344 CCDC188H7C350 402 aa21.15■□□□□ 0.98
TRAF4-204ENST00000422344 S1PR4O95977 384 aa21.15■□□□□ 0.98
TRAF4-204ENST00000422344 KLK3P07288 261 aaPredicted RBP21.15■□□□□ 0.98
TRAF4-204ENST00000422344 MSL3P1P0C860 447 aa21.15■□□□□ 0.98
TRAF4-204ENST00000422344 CD9P21926 228 aa21.15■□□□□ 0.98
TRAF4-204ENST00000422344 CCNFP41002 786 aa21.15■□□□□ 0.98
TRAF4-204ENST00000422344 PTGIRP43119 386 aa21.15■□□□□ 0.98
TRAF4-204ENST00000422344 CTBP1Q13363 440 aa21.15■□□□□ 0.98
TRAF4-204ENST00000422344 DNASE1L3Q13609 305 aa21.15■□□□□ 0.98
TRAF4-204ENST00000422344 SLC5A12Q1EHB4 618 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms