RNA–Protein interactions for RNA: ENST00000421670.3

DDX55-203, Transcript of DEAD-box helicase 55, humanhuman

TSL 1 (best) BASIC

Gene DDX55, Length 1,574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-203ENST00000421670 TMEM26Q6ZUK4 368 aa15.26■□□□□ 0.03
DDX55-203ENST00000421670 LCA5Q86VQ0 697 aa15.26■□□□□ 0.03
DDX55-203ENST00000421670 GPSM1Q86YR5 675 aa15.26■□□□□ 0.03
DDX55-203ENST00000421670 AVL9Q8NBF6 648 aa15.26■□□□□ 0.03
DDX55-203ENST00000421670 FBXO15Q8NCQ5 510 aaPredicted RBP15.26■□□□□ 0.03
DDX55-203ENST00000421670 RHEBL1Q8TAI7 183 aa15.26■□□□□ 0.03
DDX55-203ENST00000421670 STAG3L4Q8TBR4 150 aa15.26■□□□□ 0.03
DDX55-203ENST00000421670 MAGEC3Q8TD91 643 aa15.26■□□□□ 0.03
DDX55-203ENST00000421670 MCOLN3Q8TDD5 553 aa15.26■□□□□ 0.03
DDX55-203ENST00000421670 CCDC74AQ96AQ1 378 aa15.26■□□□□ 0.03
DDX55-203ENST00000421670 RAD51AP1Q96B01 352 aa15.26■□□□□ 0.03
DDX55-203ENST00000421670 ATP6V1G3Q96LB4 118 aa15.26■□□□□ 0.03
DDX55-203ENST00000421670 PKP4Q99569 1192 aa15.26■□□□□ 0.03
DDX55-203ENST00000421670 MENTQ9BUN1 341 aa15.26■□□□□ 0.03
DDX55-203ENST00000421670 ARL15Q9NXU5 204 aa15.26■□□□□ 0.03
DDX55-203ENST00000421670 POLG2Q9UHN1 485 aa15.26■□□□□ 0.03
DDX55-203ENST00000421670 ICKQ9UPZ9 632 aa15.26■□□□□ 0.03
DDX55-203ENST00000421670 DCHS1Q96JQ0 3298 aa15.26■□□□□ 0.03
DDX55-203ENST00000421670 PABPN1LA6NDY0 278 aaKnown RBP15.25■□□□□ 0.03
DDX55-203ENST00000421670 SUPT3HB4E1H0 165 aa15.25■□□□□ 0.03
DDX55-203ENST00000421670 CASC3O15234 703 aaKnown RBP15.25■□□□□ 0.03
DDX55-203ENST00000421670 TYROBPO43914 113 aa15.25■□□□□ 0.03
DDX55-203ENST00000421670 CBFA2T3O75081 653 aa15.25■□□□□ 0.03
DDX55-203ENST00000421670 SUPT3HO75486 399 aa15.25■□□□□ 0.03
DDX55-203ENST00000421670 LDOC1O95751 146 aaPredicted RBP15.25■□□□□ 0.03
DDX55-203ENST00000421670 SLC16A8O95907 504 aa15.25■□□□□ 0.03
DDX55-203ENST00000421670 ENO2P09104 434 aaPredicted RBP15.25■□□□□ 0.03
DDX55-203ENST00000421670 HIST1H2AGP0C0S8 130 aaPredicted RBP15.25■□□□□ 0.03
DDX55-203ENST00000421670 CKMT1AP12532 417 aa15.25■□□□□ 0.03
DDX55-203ENST00000421670 HIST1H2ADP20671 130 aa15.25■□□□□ 0.03
DDX55-203ENST00000421670 PERM1Q5SV97 790 aa15.25■□□□□ 0.03
DDX55-203ENST00000421670 RBM12BQ8IXT5 1001 aaKnown RBP15.25■□□□□ 0.03
DDX55-203ENST00000421670 OR9A1PQ8NGU1 263 aa15.25■□□□□ 0.03
DDX55-203ENST00000421670 BAHD1Q8TBE0 780 aaPredicted RBP15.25■□□□□ 0.03
DDX55-203ENST00000421670 DENND1AQ8TEH3 1009 aa15.25■□□□□ 0.03
DDX55-203ENST00000421670 LCN9Q8WX39 176 aa15.25■□□□□ 0.03
DDX55-203ENST00000421670 HIST1H2AHQ96KK5 128 aa15.25■□□□□ 0.03
DDX55-203ENST00000421670 SLC38A3Q99624 504 aa15.25■□□□□ 0.03
DDX55-203ENST00000421670 HIST1H2AJQ99878 128 aa15.25■□□□□ 0.03
DDX55-203ENST00000421670 EGFL8Q99944 293 aa15.25■□□□□ 0.03
DDX55-203ENST00000421670 H2AFJQ9BTM1 129 aa15.25■□□□□ 0.03
DDX55-203ENST00000421670 IQCGQ9H095 443 aaKnown RBP15.25■□□□□ 0.03
DDX55-203ENST00000421670 MRPL46Q9H2W6 279 aaKnown RBP15.25■□□□□ 0.03
DDX55-203ENST00000421670 NCKIPSDQ9NZQ3 722 aa15.25■□□□□ 0.03
DDX55-203ENST00000421670 SLC17A7Q9P2U7 560 aa15.25■□□□□ 0.03
DDX55-203ENST00000421670 ACTL7BQ9Y614 415 aa15.25■□□□□ 0.03
DDX55-203ENST00000421670 WDFY3Q8IZQ1 3526 aa15.24■□□□□ 0.03
DDX55-203ENST00000421670 EME2A4GXA9 379 aaPredicted RBP15.24■□□□□ 0.03
DDX55-203ENST00000421670 ATP8B1O43520 1251 aa15.24■□□□□ 0.03
DDX55-203ENST00000421670 RBP1P09455 135 aa15.24■□□□□ 0.03
DDX55-203ENST00000421670 SBK3P0C264 359 aa15.24■□□□□ 0.03
DDX55-203ENST00000421670 RPA3P35244 121 aaPredicted RBP15.24■□□□□ 0.03
DDX55-203ENST00000421670 FBXO48Q5FWF7 155 aa15.24■□□□□ 0.03
DDX55-203ENST00000421670 EFL1Q7Z2Z2 1120 aaKnown RBP15.24■□□□□ 0.03
DDX55-203ENST00000421670 ZNF438Q7Z4V0 828 aa15.24■□□□□ 0.03
DDX55-203ENST00000421670 TAX1BP1Q86VP1 789 aa15.24■□□□□ 0.03
DDX55-203ENST00000421670 TMEM151AQ8N4L1 468 aa15.24■□□□□ 0.03
DDX55-203ENST00000421670 C2orf73Q8N5S3 287 aaPredicted RBP15.24■□□□□ 0.03
DDX55-203ENST00000421670 Q8N9G6 341 aaPredicted RBP15.24■□□□□ 0.03
DDX55-203ENST00000421670 PPFIBP2Q8ND30 876 aa15.24■□□□□ 0.03
DDX55-203ENST00000421670 OR4E2Q8NGC2 313 aa15.24■□□□□ 0.03
DDX55-203ENST00000421670 IFI44Q8TCB0 444 aa15.24■□□□□ 0.03
DDX55-203ENST00000421670 TCP10LQ8TDR4 215 aa15.24■□□□□ 0.03
DDX55-203ENST00000421670 ALKBH8Q96BT7 664 aaKnown RBP15.24■□□□□ 0.03
DDX55-203ENST00000421670 MRPL57Q9BQC6 102 aaKnown RBP15.24■□□□□ 0.03
DDX55-203ENST00000421670 TRIM54Q9BYV2 358 aa15.24■□□□□ 0.03
DDX55-203ENST00000421670 RDH14Q9HBH5 336 aa15.24■□□□□ 0.03
DDX55-203ENST00000421670 CD274Q9NZQ7 290 aa15.24■□□□□ 0.03
DDX55-203ENST00000421670 GRID1Q9ULK0 1009 aa15.24■□□□□ 0.03
DDX55-203ENST00000421670 PCNX2A6NKB5 2137 aa15.24■□□□□ 0.03
DDX55-203ENST00000421670 COL27A1Q8IZC6 1860 aaPredicted RBP15.24■□□□□ 0.03
DDX55-203ENST00000421670 LILRA5A6NI73 299 aa15.24■□□□□ 0.03
DDX55-203ENST00000421670 PLIN3O60664 434 aa15.24■□□□□ 0.03
DDX55-203ENST00000421670 PROCP04070 461 aa15.24■□□□□ 0.03
DDX55-203ENST00000421670 MTHFD2P13995 350 aa15.24■□□□□ 0.03
DDX55-203ENST00000421670 TYRP1P17643 537 aa15.24■□□□□ 0.03
DDX55-203ENST00000421670 IMPA1P29218 277 aa15.24■□□□□ 0.03
DDX55-203ENST00000421670 ALDH4A1P30038 563 aa15.24■□□□□ 0.03
DDX55-203ENST00000421670 PKLRP30613 574 aa15.24■□□□□ 0.03
DDX55-203ENST00000421670 RAB28P51157 221 aa15.24■□□□□ 0.03
DDX55-203ENST00000421670 LIMK1P53667 647 aa15.24■□□□□ 0.03
DDX55-203ENST00000421670 AP1S2P56377 157 aa15.24■□□□□ 0.03
DDX55-203ENST00000421670 OR1D5P58170 312 aa15.24■□□□□ 0.03
DDX55-203ENST00000421670 PIP4P1Q86T03 277 aa15.24■□□□□ 0.03
DDX55-203ENST00000421670 LINC01555Q8NAE3 123 aa15.24■□□□□ 0.03
DDX55-203ENST00000421670 OR10G6Q8NH81 332 aa15.24■□□□□ 0.03
DDX55-203ENST00000421670 ZNF480Q8WV37 535 aa15.24■□□□□ 0.03
DDX55-203ENST00000421670 ZFPM2Q8WW38 1151 aa15.24■□□□□ 0.03
DDX55-203ENST00000421670 RSC1A1Q92681 617 aa15.24■□□□□ 0.03
DDX55-203ENST00000421670 SH3KBP1Q96B97 665 aa15.24■□□□□ 0.03
DDX55-203ENST00000421670 CCDC138Q96M89 665 aa15.24■□□□□ 0.03
DDX55-203ENST00000421670 FAM111AQ96PZ2 611 aa15.24■□□□□ 0.03
DDX55-203ENST00000421670 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.24■□□□□ 0.03
DDX55-203ENST00000421670 KCNK9Q9NPC2 374 aa15.24■□□□□ 0.03
DDX55-203ENST00000421670 NUDT4Q9NZJ9 180 aa15.24■□□□□ 0.03
DDX55-203ENST00000421670 STOX2Q9P2F5 926 aaPredicted RBP15.24■□□□□ 0.03
DDX55-203ENST00000421670 PLLPQ9Y342 182 aa15.24■□□□□ 0.03
DDX55-203ENST00000421670 PIEZO1Q92508 2521 aa15.23■□□□□ 0.03
DDX55-203ENST00000421670 SYCE1LA8MT33 242 aa15.23■□□□□ 0.03
DDX55-203ENST00000421670 TARM1B6A8C7 271 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms