RNA–Protein interactions for RNA: ENST00000421141.5

PTCH1-206, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,659 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-206ENST00000421141 ERVK-6Q9BXR3 956 aa10.52□□□□□ -0.73
PTCH1-206ENST00000421141 MVB12BQ9H7P6 319 aa10.52□□□□□ -0.73
PTCH1-206ENST00000421141 SCDO00767 359 aa10.52□□□□□ -0.73
PTCH1-206ENST00000421141 KHNYNO15037 678 aaKnown RBP10.52□□□□□ -0.73
PTCH1-206ENST00000421141 TLX3O43711 291 aaPredicted RBP10.52□□□□□ -0.73
PTCH1-206ENST00000421141 KCNJ13O60928 360 aa10.52□□□□□ -0.73
PTCH1-206ENST00000421141 TALDO1P37837 337 aa10.52□□□□□ -0.73
PTCH1-206ENST00000421141 USP46P62068 366 aa10.52□□□□□ -0.73
PTCH1-206ENST00000421141 BTN3A2P78410 334 aa10.52□□□□□ -0.73
PTCH1-206ENST00000421141 TRABD2AQ86V40 505 aa10.52□□□□□ -0.73
PTCH1-206ENST00000421141 DCP2Q8IU60 420 aaKnown RBP10.52□□□□□ -0.73
PTCH1-206ENST00000421141 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.52□□□□□ -0.73
PTCH1-206ENST00000421141 ARMC8Q8IUR7 673 aa10.52□□□□□ -0.73
PTCH1-206ENST00000421141 TERB1Q8NA31 727 aa10.52□□□□□ -0.73
PTCH1-206ENST00000421141 TRPV3Q8NET8 790 aa10.52□□□□□ -0.73
PTCH1-206ENST00000421141 THAP11Q96EK4 314 aa10.52□□□□□ -0.73
PTCH1-206ENST00000421141 TMEM79Q9BSE2 394 aa10.52□□□□□ -0.73
PTCH1-206ENST00000421141 TAPBPLQ9BX59 468 aa10.52□□□□□ -0.73
PTCH1-206ENST00000421141 RMI1Q9H9A7 625 aa10.52□□□□□ -0.73
PTCH1-206ENST00000421141 B4GALT6Q9UBX8 382 aa10.52□□□□□ -0.73
PTCH1-206ENST00000421141 TAC3Q9UHF0 121 aa10.52□□□□□ -0.73
PTCH1-206ENST00000421141 COPG1Q9Y678 874 aaKnown RBP10.52□□□□□ -0.73
PTCH1-206ENST00000421141 RGS5O15539 181 aa10.51□□□□□ -0.73
PTCH1-206ENST00000421141 ARSAP15289 507 aa10.51□□□□□ -0.73
PTCH1-206ENST00000421141 TNK2Q07912 1038 aa10.51□□□□□ -0.73
PTCH1-206ENST00000421141 ANKRD54Q6NXT1 300 aa10.51□□□□□ -0.73
PTCH1-206ENST00000421141 SORCS1Q8WY21 1168 aa10.51□□□□□ -0.73
PTCH1-206ENST00000421141 PMEPA1Q969W9 287 aa10.51□□□□□ -0.73
PTCH1-206ENST00000421141 TSGA13Q96PP4 275 aa10.51□□□□□ -0.73
PTCH1-206ENST00000421141 TSC22D3Q99576 134 aa10.51□□□□□ -0.73
PTCH1-206ENST00000421141 HOPXQ9BPY8 73 aaPredicted RBP10.51□□□□□ -0.73
PTCH1-206ENST00000421141 R3HDMLQ9H3Y0 253 aa10.51□□□□□ -0.73
PTCH1-206ENST00000421141 PRDM8Q9NQV8 689 aa10.51□□□□□ -0.73
PTCH1-206ENST00000421141 CLN6Q9NWW5 311 aa10.51□□□□□ -0.73
PTCH1-206ENST00000421141 OR51F1A6NGY5 319 aa10.51□□□□□ -0.73
PTCH1-206ENST00000421141 MATN2O00339 956 aa10.51□□□□□ -0.73
PTCH1-206ENST00000421141 MAN1A2O60476 641 aa10.51□□□□□ -0.73
PTCH1-206ENST00000421141 PFDN1O60925 122 aa10.51□□□□□ -0.73
PTCH1-206ENST00000421141 ARCN1P48444 511 aaKnown RBP10.51□□□□□ -0.73
PTCH1-206ENST00000421141 ERICH5Q6P6B1 374 aa10.51□□□□□ -0.73
PTCH1-206ENST00000421141 GPR151Q8TDV0 419 aa10.51□□□□□ -0.73
PTCH1-206ENST00000421141 RIBC2Q9H4K1 309 aa10.51□□□□□ -0.73
PTCH1-206ENST00000421141 ARHGEF3Q9NR81 526 aa10.51□□□□□ -0.73
PTCH1-206ENST00000421141 TOP3BO95985 862 aaKnown RBP10.51□□□□□ -0.73
PTCH1-206ENST00000421141 THEGLP0DJG4 465 aa10.51□□□□□ -0.73
PTCH1-206ENST00000421141 RPS15P62841 145 aaKnown RBP10.51□□□□□ -0.73
PTCH1-206ENST00000421141 TMED1Q13445 227 aa10.51□□□□□ -0.73
PTCH1-206ENST00000421141 SGCBQ16585 318 aa10.51□□□□□ -0.73
PTCH1-206ENST00000421141 GALNT7Q86SF2 657 aa10.51□□□□□ -0.73
PTCH1-206ENST00000421141 SVOPQ8N4V2 548 aa10.51□□□□□ -0.73
PTCH1-206ENST00000421141 MYLK2Q9H1R3 596 aa10.51□□□□□ -0.73
PTCH1-206ENST00000421141 TMX2-CTNND1H3BSU7 103 aa10.51□□□□□ -0.73
PTCH1-206ENST00000421141 GDF10P55107 478 aa10.51□□□□□ -0.73
PTCH1-206ENST00000421141 CASP6P55212 293 aa10.51□□□□□ -0.73
PTCH1-206ENST00000421141 KPNB1Q14974 876 aaKnown RBP10.51□□□□□ -0.73
PTCH1-206ENST00000421141 EML3Q32P44 896 aa10.51□□□□□ -0.73
PTCH1-206ENST00000421141 LRRC69Q6ZNQ3 347 aa10.51□□□□□ -0.73
PTCH1-206ENST00000421141 BHLHE22Q8NFJ8 381 aaPredicted RBP10.51□□□□□ -0.73
PTCH1-206ENST00000421141 TPRKBQ9Y3C4 175 aa10.51□□□□□ -0.73
PTCH1-206ENST00000421141 IL6P05231 212 aa10.51□□□□□ -0.73
PTCH1-206ENST00000421141 COX4I1P13073 169 aa10.51□□□□□ -0.73
PTCH1-206ENST00000421141 IL7RP16871 459 aa10.51□□□□□ -0.73
PTCH1-206ENST00000421141 HNRNPA2B1P22626 353 aaKnown RBP10.51□□□□□ -0.73
PTCH1-206ENST00000421141 SERPINB1P30740 379 aa10.51□□□□□ -0.73
PTCH1-206ENST00000421141 GRIA3P42263 894 aa10.51□□□□□ -0.73
PTCH1-206ENST00000421141 RGS8P57771 180 aaPredicted RBP10.51□□□□□ -0.73
PTCH1-206ENST00000421141 ERVFC1P60507 584 aa10.51□□□□□ -0.73
PTCH1-206ENST00000421141 KCNC3Q14003 757 aa10.51□□□□□ -0.73
PTCH1-206ENST00000421141 SLC8B1Q6J4K2 584 aa10.51□□□□□ -0.73
PTCH1-206ENST00000421141 NXPE1Q8N323 547 aa10.51□□□□□ -0.73
PTCH1-206ENST00000421141 IGSF8Q969P0 613 aa10.51□□□□□ -0.73
PTCH1-206ENST00000421141 HEBP1Q9NRV9 189 aa10.51□□□□□ -0.73
PTCH1-206ENST00000421141 FETUBQ9UGM5 382 aa10.51□□□□□ -0.73
PTCH1-206ENST00000421141 TIMM22Q9Y584 194 aa10.51□□□□□ -0.73
PTCH1-206ENST00000421141 AP4S1Q9Y587 144 aa10.51□□□□□ -0.73
PTCH1-206ENST00000421141 METTL18O95568 372 aa10.51□□□□□ -0.73
PTCH1-206ENST00000421141 CAPN1P07384 714 aa10.51□□□□□ -0.73
PTCH1-206ENST00000421141 PCM1Q15154 2024 aa10.51□□□□□ -0.73
PTCH1-206ENST00000421141 BROXQ5VW32 411 aa10.51□□□□□ -0.73
PTCH1-206ENST00000421141 JAZF1Q86VZ6 243 aa10.51□□□□□ -0.73
PTCH1-206ENST00000421141 CILP2Q8IUL8 1156 aa10.51□□□□□ -0.73
PTCH1-206ENST00000421141 OFCC1Q8IZS5 231 aa10.51□□□□□ -0.73
PTCH1-206ENST00000421141 BORCS6Q96GS4 357 aa10.51□□□□□ -0.73
PTCH1-206ENST00000421141 KCNH6Q9H252 994 aa10.51□□□□□ -0.73
PTCH1-206ENST00000421141 SERINC1Q9NRX5 453 aa10.51□□□□□ -0.73
PTCH1-206ENST00000421141 ZBTB42B2RXF5 422 aa10.5□□□□□ -0.73
PTCH1-206ENST00000421141 ERI3O43414 337 aaKnown RBP10.5□□□□□ -0.73
PTCH1-206ENST00000421141 GIMD1P0DJR0 217 aa10.5□□□□□ -0.73
PTCH1-206ENST00000421141 PTGES3Q15185 160 aaKnown RBP10.5□□□□□ -0.73
PTCH1-206ENST00000421141 SLC44A4Q53GD3 710 aa10.5□□□□□ -0.73
PTCH1-206ENST00000421141 TMEM240Q5SV17 173 aa10.5□□□□□ -0.73
PTCH1-206ENST00000421141 PAQR3Q6TCH7 311 aa10.5□□□□□ -0.73
PTCH1-206ENST00000421141 NEK10Q6ZWH5 1172 aa10.5□□□□□ -0.73
PTCH1-206ENST00000421141 KIAA2013Q8IYS2 634 aa10.5□□□□□ -0.73
PTCH1-206ENST00000421141 UMODL1-AS1Q8N2C9 162 aa10.5□□□□□ -0.73
PTCH1-206ENST00000421141 SMYD1Q8NB12 490 aa10.5□□□□□ -0.73
PTCH1-206ENST00000421141 SLC5A11Q8WWX8 675 aa10.5□□□□□ -0.73
PTCH1-206ENST00000421141 TRIM39Q9HCM9 518 aa10.5□□□□□ -0.73
PTCH1-206ENST00000421141 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.5□□□□□ -0.73
PTCH1-206ENST00000421141 ZNF282Q9UDV7 671 aaPredicted RBP10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms