RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 KIFC1Q9BW19 673 aa10.66□□□□□ -0.7
SSBP3-206ENST00000420121 IL22Q9GZX6 179 aa10.66□□□□□ -0.7
SSBP3-206ENST00000420121 ACTR5Q9H9F9 607 aaPredicted RBP10.66□□□□□ -0.7
SSBP3-206ENST00000420121 SYBUQ9NX95 663 aa10.66□□□□□ -0.7
SSBP3-206ENST00000420121 OR6C2Q9NZP2 312 aa10.66□□□□□ -0.7
SSBP3-206ENST00000420121 POLG2Q9UHN1 485 aa10.66□□□□□ -0.7
SSBP3-206ENST00000420121 TLK1Q9UKI8 766 aa10.66□□□□□ -0.7
SSBP3-206ENST00000420121 PPP2R2CQ9Y2T4 447 aa10.66□□□□□ -0.7
SSBP3-206ENST00000420121 TDRKHQ9Y2W6 561 aaKnown RBP10.66□□□□□ -0.7
SSBP3-206ENST00000420121 PRRC2CQ9Y520 2896 aaKnown RBP10.66□□□□□ -0.7
SSBP3-206ENST00000420121 SHANK1Q9Y566 2161 aa10.65□□□□□ -0.7
SSBP3-206ENST00000420121 A0A0J9YY10 115 aa10.65□□□□□ -0.7
SSBP3-206ENST00000420121 ZNF749O43361 778 aa10.65□□□□□ -0.7
SSBP3-206ENST00000420121 PRICKLE3O43900 615 aaPredicted RBP10.65□□□□□ -0.7
SSBP3-206ENST00000420121 CEP104O60308 925 aa10.65□□□□□ -0.7
SSBP3-206ENST00000420121 RFPL1O75677 317 aa10.65□□□□□ -0.7
SSBP3-206ENST00000420121 CYP2A7P20853 494 aa10.65□□□□□ -0.7
SSBP3-206ENST00000420121 RPS3P23396 243 aaKnown RBP eCLIP10.65□□□□□ -0.7
SSBP3-206ENST00000420121 MGAT1P26572 445 aa10.65□□□□□ -0.7
SSBP3-206ENST00000420121 MAGEA6P43360 314 aa10.65□□□□□ -0.7
SSBP3-206ENST00000420121 GCGRP47871 477 aa10.65□□□□□ -0.7
SSBP3-206ENST00000420121 NPY2RP49146 381 aa10.65□□□□□ -0.7
SSBP3-206ENST00000420121 ITGA1P56199 1179 aa10.65□□□□□ -0.7
SSBP3-206ENST00000420121 BASP1P80723 227 aaKnown RBP10.65□□□□□ -0.7
SSBP3-206ENST00000420121 KCNC4Q03721 635 aa10.65□□□□□ -0.7
SSBP3-206ENST00000420121 HSPA14Q0VDF9 509 aa10.65□□□□□ -0.7
SSBP3-206ENST00000420121 KCNJ11Q14654 390 aa10.65□□□□□ -0.7
SSBP3-206ENST00000420121 SLC5A12Q1EHB4 618 aa10.65□□□□□ -0.7
SSBP3-206ENST00000420121 PTCHD3Q3KNS1 767 aa10.65□□□□□ -0.7
SSBP3-206ENST00000420121 SYTL3Q4VX76 610 aa10.65□□□□□ -0.7
SSBP3-206ENST00000420121 LACTB2Q53H82 288 aaPredicted RBP10.65□□□□□ -0.7
SSBP3-206ENST00000420121 DNAJC21Q5F1R6 531 aaKnown RBP10.65□□□□□ -0.7
SSBP3-206ENST00000420121 CTSL3PQ5NE16 218 aa10.65□□□□□ -0.7
SSBP3-206ENST00000420121 LRRC8BQ6P9F7 803 aa10.65□□□□□ -0.7
SSBP3-206ENST00000420121 CES3Q6UWW8 571 aa10.65□□□□□ -0.7
SSBP3-206ENST00000420121 C4orf22Q6V702 233 aa10.65□□□□□ -0.7
SSBP3-206ENST00000420121 TMEM151BQ8IW70 566 aa10.65□□□□□ -0.7
SSBP3-206ENST00000420121 MPP5Q8N3R9 675 aa10.65□□□□□ -0.7
SSBP3-206ENST00000420121 RASGEF1CQ8N431 466 aa10.65□□□□□ -0.7
SSBP3-206ENST00000420121 DNAJC22Q8N4W6 341 aa10.65□□□□□ -0.7
SSBP3-206ENST00000420121 MAIP1Q8WWC4 291 aa10.65□□□□□ -0.7
SSBP3-206ENST00000420121 ASZ1Q8WWH4 475 aa10.65□□□□□ -0.7
SSBP3-206ENST00000420121 CLIP3Q96DZ5 547 aa10.65□□□□□ -0.7
SSBP3-206ENST00000420121 BIRC8Q96P09 236 aa10.65□□□□□ -0.7
SSBP3-206ENST00000420121 TRIM56Q9BRZ2 755 aaKnown RBP10.65□□□□□ -0.7
SSBP3-206ENST00000420121 NLNQ9BYT8 704 aa10.65□□□□□ -0.7
SSBP3-206ENST00000420121 SPRTNQ9H040 489 aaPredicted RBP10.65□□□□□ -0.7
SSBP3-206ENST00000420121 FANCEQ9HB96 536 aa10.65□□□□□ -0.7
SSBP3-206ENST00000420121 MRM3Q9HC36 420 aaKnown RBP10.65□□□□□ -0.7
SSBP3-206ENST00000420121 MLXIPLQ9NP71 852 aa10.65□□□□□ -0.7
SSBP3-206ENST00000420121 CIDEBQ9UHD4 219 aa10.65□□□□□ -0.7
SSBP3-206ENST00000420121 ANAPC2Q9UJX6 822 aa10.65□□□□□ -0.7
SSBP3-206ENST00000420121 TCFL5Q9UL49 500 aa10.65□□□□□ -0.7
SSBP3-206ENST00000420121 MAN2B2Q9Y2E5 1009 aa10.65□□□□□ -0.7
SSBP3-206ENST00000420121 LRRK2Q5S007 2527 aa10.65□□□□□ -0.7
SSBP3-206ENST00000420121 MDC1Q14676 2089 aaKnown RBP10.65□□□□□ -0.7
SSBP3-206ENST00000420121 USP9XQ93008 2570 aaPredicted RBP10.65□□□□□ -0.71
SSBP3-206ENST00000420121 DOPEY2Q9Y3R5 2298 aa10.64□□□□□ -0.71
SSBP3-206ENST00000420121 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.64□□□□□ -0.71
SSBP3-206ENST00000420121 KRT87PA6NCN2 255 aa10.64□□□□□ -0.71
SSBP3-206ENST00000420121 E7EQ34 232 aa10.64□□□□□ -0.71
SSBP3-206ENST00000420121 CNOT3O75175 753 aaKnown RBP10.64□□□□□ -0.71
SSBP3-206ENST00000420121 AVILO75366 819 aa10.64□□□□□ -0.71
SSBP3-206ENST00000420121 KLF7O75840 302 aaPredicted RBP10.64□□□□□ -0.71
SSBP3-206ENST00000420121 TMEM63AO94886 807 aa10.64□□□□□ -0.71
SSBP3-206ENST00000420121 KLK3P07288 261 aaPredicted RBP10.64□□□□□ -0.71
SSBP3-206ENST00000420121 CBSLP0DN79 551 aa10.64□□□□□ -0.71
SSBP3-206ENST00000420121 CBSP35520 551 aa10.64□□□□□ -0.71
SSBP3-206ENST00000420121 PTGIRP43119 386 aa10.64□□□□□ -0.71
SSBP3-206ENST00000420121 TTPAP49638 278 aa10.64□□□□□ -0.71
SSBP3-206ENST00000420121 RAB28P51157 221 aa10.64□□□□□ -0.71
SSBP3-206ENST00000420121 RPS15P62841 145 aaKnown RBP10.64□□□□□ -0.71
SSBP3-206ENST00000420121 CDK16Q00536 496 aa10.64□□□□□ -0.71
SSBP3-206ENST00000420121 CHAF1BQ13112 559 aa10.64□□□□□ -0.71
SSBP3-206ENST00000420121 GBX1Q14549 363 aa10.64□□□□□ -0.71
SSBP3-206ENST00000420121 KIR2DS3Q14952 304 aa10.64□□□□□ -0.71
SSBP3-206ENST00000420121 TYSND1Q2T9J0 566 aa10.64□□□□□ -0.71
SSBP3-206ENST00000420121 CCSMST1Q4G0I0 132 aa10.64□□□□□ -0.71
SSBP3-206ENST00000420121 AARS2Q5JTZ9 985 aaKnown RBP10.64□□□□□ -0.71
SSBP3-206ENST00000420121 ANKRD22Q5VYY1 191 aa10.64□□□□□ -0.71
SSBP3-206ENST00000420121 UNC5DQ6UXZ4 953 aa10.64□□□□□ -0.71
SSBP3-206ENST00000420121 CAND1Q86VP6 1230 aaKnown RBP10.64□□□□□ -0.71
SSBP3-206ENST00000420121 THAP4Q8WY91 577 aa10.64□□□□□ -0.71
SSBP3-206ENST00000420121 SEC14L1Q92503 715 aa10.64□□□□□ -0.71
SSBP3-206ENST00000420121 LPGAT1Q92604 370 aa10.64□□□□□ -0.71
SSBP3-206ENST00000420121 TCTN2Q96GX1 697 aa10.64□□□□□ -0.71
SSBP3-206ENST00000420121 IL17FQ96PD4 163 aa10.64□□□□□ -0.71
SSBP3-206ENST00000420121 GBP5Q96PP8 586 aa10.64□□□□□ -0.71
SSBP3-206ENST00000420121 TTC1Q99614 292 aa10.64□□□□□ -0.71
SSBP3-206ENST00000420121 BFARQ9NZS9 450 aa10.64□□□□□ -0.71
SSBP3-206ENST00000420121 SERTAD3Q9UJW9 196 aa10.64□□□□□ -0.71
SSBP3-206ENST00000420121 TTC7AQ9ULT0 858 aaPredicted RBP10.64□□□□□ -0.71
SSBP3-206ENST00000420121 SOX13Q9UN79 622 aa10.64□□□□□ -0.71
SSBP3-206ENST00000420121 NEU2Q9Y3R4 380 aa10.64□□□□□ -0.71
SSBP3-206ENST00000420121 NFS1Q9Y697 457 aa10.64□□□□□ -0.71
SSBP3-206ENST00000420121 DOCK10Q96BY6 2186 aa10.64□□□□□ -0.71
SSBP3-206ENST00000420121 ARGFXA6NJG6 315 aa10.63□□□□□ -0.71
SSBP3-206ENST00000420121 ISM1B1AKI9 464 aa10.63□□□□□ -0.71
SSBP3-206ENST00000420121 GOLGA8KD6RF30 607 aa10.63□□□□□ -0.71
SSBP3-206ENST00000420121 MKRN2OSH3BPM6 223 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms