RNA–Protein interactions for RNA: ENST00000418628.5

PTCD3-204, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-204ENST00000418628 TSPAN7P41732 249 aa18.07■□□□□ 0.48
PTCD3-204ENST00000418628 ERVPABLB-1P60509 514 aa18.07■□□□□ 0.48
PTCD3-204ENST00000418628 CCSMST1Q4G0I0 132 aa18.07■□□□□ 0.48
PTCD3-204ENST00000418628 LRRC8EQ6NSJ5 796 aa18.07■□□□□ 0.48
PTCD3-204ENST00000418628 PAQR3Q6TCH7 311 aa18.07■□□□□ 0.48
PTCD3-204ENST00000418628 PROSER1Q86XN7 944 aa18.07■□□□□ 0.48
PTCD3-204ENST00000418628 EIF1ADQ8N9N8 165 aaKnown RBP18.07■□□□□ 0.48
PTCD3-204ENST00000418628 SNIP1Q8TAD8 396 aaKnown RBP18.07■□□□□ 0.48
PTCD3-204ENST00000418628 HMGCLL1Q8TB92 370 aa18.07■□□□□ 0.48
PTCD3-204ENST00000418628 ASB11Q8WXH4 323 aa18.07■□□□□ 0.48
PTCD3-204ENST00000418628 UBXN4Q92575 508 aa18.07■□□□□ 0.48
PTCD3-204ENST00000418628 ZNF578Q96N58 590 aaPredicted RBP18.07■□□□□ 0.48
PTCD3-204ENST00000418628 GPR22Q99680 433 aa18.07■□□□□ 0.48
PTCD3-204ENST00000418628 MAP3K3Q99759 626 aa18.07■□□□□ 0.48
PTCD3-204ENST00000418628 TXLNGYQ9BZA5 131 aa18.07■□□□□ 0.48
PTCD3-204ENST00000418628 CCDC86Q9H6F5 360 aaKnown RBP18.07■□□□□ 0.48
PTCD3-204ENST00000418628 KLHL3Q9UH77 587 aa18.07■□□□□ 0.48
PTCD3-204ENST00000418628 PLAGL1Q9UM63 463 aa18.07■□□□□ 0.48
PTCD3-204ENST00000418628 NFU1Q9UMS0 254 aa18.07■□□□□ 0.48
PTCD3-204ENST00000418628 VWA7Q9Y334 891 aa18.07■□□□□ 0.48
PTCD3-204ENST00000418628 PCDHGA7Q9Y5G6 932 aa18.07■□□□□ 0.48
PTCD3-204ENST00000418628 CCDC88CQ9P219 2028 aa18.06■□□□□ 0.48
PTCD3-204ENST00000418628 LAMA5O15230 3695 aa18.06■□□□□ 0.48
PTCD3-204ENST00000418628 IGHV5-51A0A0C4DH38 117 aa18.06■□□□□ 0.48
PTCD3-204ENST00000418628 TAF4O00268 1085 aa18.06■□□□□ 0.48
PTCD3-204ENST00000418628 RASGRF2O14827 1237 aa18.06■□□□□ 0.48
PTCD3-204ENST00000418628 TLX3O43711 291 aaPredicted RBP18.06■□□□□ 0.48
PTCD3-204ENST00000418628 KDM1AO60341 852 aa18.06■□□□□ 0.48
PTCD3-204ENST00000418628 CHRM5P08912 532 aaPredicted RBP18.06■□□□□ 0.48
PTCD3-204ENST00000418628 CCL4P13236 92 aa18.06■□□□□ 0.48
PTCD3-204ENST00000418628 ZNF37AP17032 561 aaPredicted RBP18.06■□□□□ 0.48
PTCD3-204ENST00000418628 POLR2CP19387 275 aaPredicted RBP18.06■□□□□ 0.48
PTCD3-204ENST00000418628 MCM3P25205 808 aa18.06■□□□□ 0.48
PTCD3-204ENST00000418628 GP5P40197 560 aa18.06■□□□□ 0.48
PTCD3-204ENST00000418628 PGGT1BP53609 377 aa18.06■□□□□ 0.48
PTCD3-204ENST00000418628 EFTUD2Q15029 972 aaKnown RBP eCLIP18.06■□□□□ 0.488e-7■■■■■ 34.2
PTCD3-204ENST00000418628 DNTTIP2Q5QJE6 756 aaKnown RBP18.06■□□□□ 0.48
PTCD3-204ENST00000418628 SNAP47Q5SQN1 464 aa18.06■□□□□ 0.48
PTCD3-204ENST00000418628 FAM92BQ6ZTR7 304 aa18.06■□□□□ 0.48
PTCD3-204ENST00000418628 PIWIL4Q7Z3Z4 852 aaKnown RBP18.06■□□□□ 0.48
PTCD3-204ENST00000418628 KMT5CQ86Y97 462 aa18.06■□□□□ 0.48
PTCD3-204ENST00000418628 GPATCH11Q8N954 259 aa18.06■□□□□ 0.48
PTCD3-204ENST00000418628 OR2L8Q8NGY9 312 aa18.06■□□□□ 0.48
PTCD3-204ENST00000418628 CFAP61Q8NHU2 1237 aa18.06■□□□□ 0.48
PTCD3-204ENST00000418628 ZCCHC14Q8WYQ9 949 aaKnown RBP18.06■□□□□ 0.48
PTCD3-204ENST00000418628 RAD51AP1Q96B01 352 aa18.06■□□□□ 0.48
PTCD3-204ENST00000418628 PPM1MQ96MI6 270 aa18.06■□□□□ 0.48
PTCD3-204ENST00000418628 FOPNLQ96NB1 174 aa18.06■□□□□ 0.48
PTCD3-204ENST00000418628 RAB11FIP5Q9BXF6 653 aa18.06■□□□□ 0.48
PTCD3-204ENST00000418628 ACSS3Q9H6R3 686 aa18.06■□□□□ 0.48
PTCD3-204ENST00000418628 OCIAD1Q9NX40 245 aa18.06■□□□□ 0.48
PTCD3-204ENST00000418628 SPATA7Q9P0W8 599 aa18.06■□□□□ 0.48
PTCD3-204ENST00000418628 BTRCQ9Y297 605 aa18.06■□□□□ 0.48
PTCD3-204ENST00000418628 TDRKHQ9Y2W6 561 aaKnown RBP18.06■□□□□ 0.48
PTCD3-204ENST00000418628 PCDHGA3Q9Y5H0 932 aa18.06■□□□□ 0.48
PTCD3-204ENST00000418628 KRT87PA6NCN2 255 aa18.05■□□□□ 0.48
PTCD3-204ENST00000418628 A8MU76 341 aa18.05■□□□□ 0.48
PTCD3-204ENST00000418628 PRICKLE3O43900 615 aaPredicted RBP18.05■□□□□ 0.48
PTCD3-204ENST00000418628 NELFEP18615 380 aaKnown RBP18.05■□□□□ 0.48
PTCD3-204ENST00000418628 CSTF2P33240 577 aaKnown RBP eCLIP18.05■□□□□ 0.48
PTCD3-204ENST00000418628 TAS2R39P59534 338 aa18.05■□□□□ 0.48
PTCD3-204ENST00000418628 CACHD1Q5VU97 1274 aa18.05■□□□□ 0.48
PTCD3-204ENST00000418628 TMEM207Q6UWW9 146 aa18.05■□□□□ 0.48
PTCD3-204ENST00000418628 EEF1AKMT1Q8WVE0 214 aa18.05■□□□□ 0.48
PTCD3-204ENST00000418628 DLG3Q92796 817 aa18.05■□□□□ 0.48
PTCD3-204ENST00000418628 PMEPA1Q969W9 287 aa18.05■□□□□ 0.48
PTCD3-204ENST00000418628 PDLIM5Q96HC4 596 aaKnown RBP18.05■□□□□ 0.48
PTCD3-204ENST00000418628 OR2A14Q96R47 310 aa18.05■□□□□ 0.48
PTCD3-204ENST00000418628 POPDC3Q9HBV1 291 aa18.05■□□□□ 0.48
PTCD3-204ENST00000418628 C1GALT1Q9NS00 363 aa18.05■□□□□ 0.48
PTCD3-204ENST00000418628 SPHK1Q9NYA1 384 aa18.05■□□□□ 0.48
PTCD3-204ENST00000418628 ACTR10Q9NZ32 417 aa18.05■□□□□ 0.48
PTCD3-204ENST00000418628 PISDQ9UG56 409 aa18.05■□□□□ 0.48
PTCD3-204ENST00000418628 AK5Q9Y6K8 562 aa18.05■□□□□ 0.48
PTCD3-204ENST00000418628 C2orf74A8MZ97 194 aa18.04■□□□□ 0.48
PTCD3-204ENST00000418628 C9orf172C9J069 976 aa18.04■□□□□ 0.48
PTCD3-204ENST00000418628 NVLO15381 856 aaKnown RBP18.04■□□□□ 0.48
PTCD3-204ENST00000418628 TNFSF15O95150 251 aa18.04■□□□□ 0.48
PTCD3-204ENST00000418628 CATP04040 527 aaKnown RBP18.04■□□□□ 0.48
PTCD3-204ENST00000418628 JMJD7P0C870 316 aa18.04■□□□□ 0.48
PTCD3-204ENST00000418628 MYBL2P10244 700 aa18.04■□□□□ 0.48
PTCD3-204ENST00000418628 UGT2B7P16662 529 aa18.04■□□□□ 0.48
PTCD3-204ENST00000418628 PRDX3P30048 256 aaKnown RBP18.04■□□□□ 0.48
PTCD3-204ENST00000418628 PPM1FP49593 454 aaPredicted RBP18.04■□□□□ 0.48
PTCD3-204ENST00000418628 CSRP3P50461 194 aa18.04■□□□□ 0.48
PTCD3-204ENST00000418628 MC2RQ01718 297 aa18.04■□□□□ 0.48
PTCD3-204ENST00000418628 PRKAA1Q13131 559 aa18.04■□□□□ 0.48
PTCD3-204ENST00000418628 SP140Q13342 867 aa18.04■□□□□ 0.48
PTCD3-204ENST00000418628 PDAP1Q13442 181 aaKnown RBP18.04■□□□□ 0.48
PTCD3-204ENST00000418628 KIR2DS3Q14952 304 aa18.04■□□□□ 0.48
PTCD3-204ENST00000418628 ZKSCAN8Q15776 578 aaPredicted RBP18.04■□□□□ 0.48
PTCD3-204ENST00000418628 CYP2A13Q16696 494 aa18.04■□□□□ 0.48
PTCD3-204ENST00000418628 TEX35Q5T0J7 233 aa18.04■□□□□ 0.48
PTCD3-204ENST00000418628 SPESP1Q6UW49 350 aa18.04■□□□□ 0.48
PTCD3-204ENST00000418628 CEP97Q8IW35 865 aa18.04■□□□□ 0.48
PTCD3-204ENST00000418628 D2HGDHQ8N465 521 aa18.04■□□□□ 0.48
PTCD3-204ENST00000418628 MAGEC3Q8TD91 643 aa18.04■□□□□ 0.48
PTCD3-204ENST00000418628 SKA2Q8WVK7 121 aaPredicted RBP18.04■□□□□ 0.48
PTCD3-204ENST00000418628 ELMO2Q96JJ3 720 aa18.04■□□□□ 0.48
PTCD3-204ENST00000418628 IL17FQ96PD4 163 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms