RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 EDDM13A0A1B0GTR0 161 aa11.01□□□□□ -0.65
PTCH1-205ENST00000418258 ENTPD5O75356 428 aa11.01□□□□□ -0.65
PTCH1-205ENST00000418258 REM1O75628 298 aa11.01□□□□□ -0.65
PTCH1-205ENST00000418258 LYPLA2O95372 231 aa11.01□□□□□ -0.65
PTCH1-205ENST00000418258 CLCNKAP51800 687 aa11.01□□□□□ -0.65
PTCH1-205ENST00000418258 DPYSQ14117 519 aa11.01□□□□□ -0.65
PTCH1-205ENST00000418258 RFTN1Q14699 578 aaPredicted RBP11.01□□□□□ -0.65
PTCH1-205ENST00000418258 TMEM63BQ5T3F8 832 aa11.01□□□□□ -0.65
PTCH1-205ENST00000418258 RBM44Q6ZP01 1051 aaKnown RBP11.01□□□□□ -0.65
PTCH1-205ENST00000418258 LRRTM4Q86VH4 590 aa11.01□□□□□ -0.65
PTCH1-205ENST00000418258 ZNF611Q8N823 705 aa11.01□□□□□ -0.65
PTCH1-205ENST00000418258 ZNF615Q8N8J6 731 aa11.01□□□□□ -0.65
PTCH1-205ENST00000418258 KIAA1143Q96AT1 154 aaPredicted RBP11.01□□□□□ -0.65
PTCH1-205ENST00000418258 DHX33Q9H6R0 707 aaKnown RBP11.01□□□□□ -0.65
PTCH1-205ENST00000418258 OR1I1O60431 355 aa11.01□□□□□ -0.65
PTCH1-205ENST00000418258 MPZL2O60487 215 aa11.01□□□□□ -0.65
PTCH1-205ENST00000418258 OR4F21O95013 312 aa11.01□□□□□ -0.65
PTCH1-205ENST00000418258 TBX18O95935 607 aa11.01□□□□□ -0.65
PTCH1-205ENST00000418258 TSTD2Q5T7W7 516 aa11.01□□□□□ -0.65
PTCH1-205ENST00000418258 TMEM126BQ8IUX1 230 aa11.01□□□□□ -0.65
PTCH1-205ENST00000418258 MCFD2Q8NI22 146 aa11.01□□□□□ -0.65
PTCH1-205ENST00000418258 DENND1AQ8TEH3 1009 aa11.01□□□□□ -0.65
PTCH1-205ENST00000418258 SEZ6LQ9BYH1 1024 aa11.01□□□□□ -0.65
PTCH1-205ENST00000418258 ZNF282Q9UDV7 671 aaPredicted RBP11.01□□□□□ -0.65
PTCH1-205ENST00000418258 SOWAHBA6NEL2 793 aa11.01□□□□□ -0.65
PTCH1-205ENST00000418258 SNX4O95219 450 aa11.01□□□□□ -0.65
PTCH1-205ENST00000418258 POU5F1Q01860 360 aaKnown RBP11.01□□□□□ -0.65
PTCH1-205ENST00000418258 LGR4Q9BXB1 951 aa11.01□□□□□ -0.65
PTCH1-205ENST00000418258 METTL7AQ9H8H3 244 aa11.01□□□□□ -0.65
PTCH1-205ENST00000418258 C8orf4Q9NR00 106 aa11.01□□□□□ -0.65
PTCH1-205ENST00000418258 TMLHEQ9NVH6 421 aa11.01□□□□□ -0.65
PTCH1-205ENST00000418258 IFT80Q9P2H3 777 aaPredicted RBP11.01□□□□□ -0.65
PTCH1-205ENST00000418258 SERTAD3Q9UJW9 196 aa11.01□□□□□ -0.65
PTCH1-205ENST00000418258 INPPL1O15357 1258 aa11.01□□□□□ -0.65
PTCH1-205ENST00000418258 AHCYL1O43865 530 aa11.01□□□□□ -0.65
PTCH1-205ENST00000418258 ESR1P03372 595 aa11.01□□□□□ -0.65
PTCH1-205ENST00000418258 TARDBPQ13148 414 aaKnown RBP eCLIP11.01□□□□□ -0.65
PTCH1-205ENST00000418258 SIM2Q14190 667 aaPredicted RBP11.01□□□□□ -0.65
PTCH1-205ENST00000418258 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.01□□□□□ -0.65
PTCH1-205ENST00000418258 FAM174BQ3ZCQ3 159 aa11.01□□□□□ -0.65
PTCH1-205ENST00000418258 C5orf22Q49AR2 442 aa11.01□□□□□ -0.65
PTCH1-205ENST00000418258 FIP1L1Q6UN15 594 aaKnown RBP11.01□□□□□ -0.65
PTCH1-205ENST00000418258 ZNF366Q8N895 744 aa11.01□□□□□ -0.65
PTCH1-205ENST00000418258 PIWIL1Q96J94 861 aaKnown RBP11.01□□□□□ -0.65
PTCH1-205ENST00000418258 KXD1Q9BQD3 176 aa11.01□□□□□ -0.65
PTCH1-205ENST00000418258 MKKSQ9NPJ1 570 aaPredicted RBP11.01□□□□□ -0.65
PTCH1-205ENST00000418258 FAM240BA0A1B0GVZ2 78 aa11.01□□□□□ -0.65
PTCH1-205ENST00000418258 C9JVG2 144 aa11.01□□□□□ -0.65
PTCH1-205ENST00000418258 RPS24P62847 133 aaKnown RBP11.01□□□□□ -0.65
PTCH1-205ENST00000418258 NFKB2Q00653 900 aa11.01□□□□□ -0.65
PTCH1-205ENST00000418258 SLCO6A1Q86UG4 719 aa11.01□□□□□ -0.65
PTCH1-205ENST00000418258 ARL10Q8N8L6 244 aa11.01□□□□□ -0.65
PTCH1-205ENST00000418258 HM13Q8TCT9 377 aa11.01□□□□□ -0.65
PTCH1-205ENST00000418258 ZSCAN5AQ9BUG6 496 aa11.01□□□□□ -0.65
PTCH1-205ENST00000418258 SDHAF3Q9NRP4 125 aa11.01□□□□□ -0.65
PTCH1-205ENST00000418258 NCDNQ9UBB6 729 aa11.01□□□□□ -0.65
PTCH1-205ENST00000418258 A0A0J9YVX5 310 aa11□□□□□ -0.65
PTCH1-205ENST00000418258 LINGO3P0C6S8 592 aa11□□□□□ -0.65
PTCH1-205ENST00000418258 MYCLP1P12525 358 aaPredicted RBP11□□□□□ -0.65
PTCH1-205ENST00000418258 NDUFS1P28331 727 aa11□□□□□ -0.65
PTCH1-205ENST00000418258 ARCN1P48444 511 aaKnown RBP11□□□□□ -0.65
PTCH1-205ENST00000418258 NR1H2P55055 460 aa11□□□□□ -0.65
PTCH1-205ENST00000418258 DAOAP59103 153 aa11□□□□□ -0.65
PTCH1-205ENST00000418258 TIGD5Q53EQ6 642 aa11□□□□□ -0.65
PTCH1-205ENST00000418258 CAMKVQ8NCB2 501 aa11□□□□□ -0.65
PTCH1-205ENST00000418258 MUC13Q9H3R2 512 aa11□□□□□ -0.65
PTCH1-205ENST00000418258 GRXCR2A6NFK2 248 aa11□□□□□ -0.65
PTCH1-205ENST00000418258 MT-ND1P03886 318 aa11□□□□□ -0.65
PTCH1-205ENST00000418258 ANO7Q6IWH7 933 aa11□□□□□ -0.65
PTCH1-205ENST00000418258 FSTL4Q6MZW2 842 aa11□□□□□ -0.65
PTCH1-205ENST00000418258 ZNF613Q6PF04 617 aa11□□□□□ -0.65
PTCH1-205ENST00000418258 AHSA2Q719I0 299 aa11□□□□□ -0.65
PTCH1-205ENST00000418258 MNTQ99583 582 aa11□□□□□ -0.65
PTCH1-205ENST00000418258 SMURF2Q9HAU4 748 aa11□□□□□ -0.65
PTCH1-205ENST00000418258 UPB1Q9UBR1 384 aa11□□□□□ -0.65
PTCH1-205ENST00000418258 FAM172BPA6NC97 362 aa11□□□□□ -0.65
PTCH1-205ENST00000418258 PITPNM1O00562 1244 aa11□□□□□ -0.65
PTCH1-205ENST00000418258 GADD45GO95257 159 aa11□□□□□ -0.65
PTCH1-205ENST00000418258 PGAM2P15259 253 aa11□□□□□ -0.65
PTCH1-205ENST00000418258 MAP3K8P41279 467 aa11□□□□□ -0.65
PTCH1-205ENST00000418258 KCNJ2P63252 427 aa11□□□□□ -0.65
PTCH1-205ENST00000418258 GPALPP1Q8IXQ4 340 aa11□□□□□ -0.65
PTCH1-205ENST00000418258 RUVBL1Q9Y265 456 aaKnown RBP11□□□□□ -0.65
PTCH1-205ENST00000418258 AP4B1Q9Y6B7 739 aa11□□□□□ -0.65
PTCH1-205ENST00000418258 PCDH7O60245 1069 aa11□□□□□ -0.65
PTCH1-205ENST00000418258 STATHP02808 62 aa11□□□□□ -0.65
PTCH1-205ENST00000418258 GSTT1P30711 240 aa11□□□□□ -0.65
PTCH1-205ENST00000418258 MECP2P51608 486 aaKnown RBP11□□□□□ -0.65
PTCH1-205ENST00000418258 ARL13AQ5H913 290 aaPredicted RBP11□□□□□ -0.65
PTCH1-205ENST00000418258 TMPRSS9Q7Z410 1059 aa11□□□□□ -0.65
PTCH1-205ENST00000418258 PROKR2Q8NFJ6 384 aa11□□□□□ -0.65
PTCH1-205ENST00000418258 CIB1Q99828 191 aa11□□□□□ -0.65
PTCH1-205ENST00000418258 BCO2Q9BYV7 579 aa11□□□□□ -0.65
PTCH1-205ENST00000418258 BRD7Q9NPI1 651 aa11□□□□□ -0.65
PTCH1-205ENST00000418258 CTPS2Q9NRF8 586 aa11□□□□□ -0.65
PTCH1-205ENST00000418258 DKKL1Q9UK85 242 aa11□□□□□ -0.65
PTCH1-205ENST00000418258 IRS2Q9Y4H2 1338 aa11□□□□□ -0.65
PTCH1-205ENST00000418258 ROBO1Q9Y6N7 1651 aa11□□□□□ -0.65
PTCH1-205ENST00000418258 YJEFN3A6XGL0 299 aa11□□□□□ -0.65
PTCH1-205ENST00000418258 FSCN2O14926 492 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms