RNA–Protein interactions for RNA: ENST00000418188.1

CSPG4P3Y-201, Transcript of CSPG4 pseudogene 3 Y-linked, humanhuman

BASIC

Gene CSPG4P3Y, Length 3,724 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P3Y-201ENST00000418188 TCF3P15923 654 aa11.43□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 SHMT2P34897 504 aa11.43□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 CCL23P55773 120 aa11.43□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 TUBA3CQ13748 450 aa11.43□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 MYBPC3Q14896 1274 aa11.43□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 MEP1AQ16819 746 aa11.43□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 ZNF829Q3KNS6 432 aaPredicted RBP11.43□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 GPRC6AQ5T6X5 926 aa11.43□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 ATG9BQ674R7 924 aa11.43□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 TRIM46Q7Z4K8 759 aa11.43□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 ADGRG2Q8IZP9 1017 aa11.43□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 HS3ST5Q8IZT8 346 aa11.43□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 CLSTN3Q9BQT9 956 aa11.43□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 NAA50Q9GZZ1 169 aaKnown RBP11.43□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 CLMPQ9H6B4 373 aa11.43□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 KIAA1522Q9P206 1035 aaPredicted RBP11.43□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 GREB1Q4ZG55 1949 aa11.43□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 LATS1O95835 1130 aa11.43□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 URODP06132 367 aa11.43□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 MYCLP1P12525 358 aaPredicted RBP11.43□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 PRKACGP22612 351 aa11.43□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 EMP3P54852 163 aa11.43□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 PON2Q15165 354 aa11.43□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 C6orf141Q5SZD1 244 aa11.43□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 METTL2BQ6P1Q9 378 aaKnown RBP11.43□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 SCLYQ96I15 445 aa11.43□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 IGSF21Q96ID5 467 aa11.43□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 APOLD1Q96LR9 279 aa11.43□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 RAD21L1Q9H4I0 556 aa11.43□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 KIF17Q9P2E2 1029 aa11.43□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 CDH7Q9ULB5 785 aa11.43□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 PCDHB14Q9Y5E9 798 aa11.43□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 PCDHGA8Q9Y5G5 932 aa11.43□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 LOC100130705A0A1B0GUX0 176 aa11.43□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 PER2O15055 1255 aa11.43□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 MYCP01106 439 aaPredicted RBP11.43□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 RETP07949 1114 aa11.43□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 CBSLP0DN79 551 aa11.43□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 CYP2A7P20853 494 aa11.43□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 CBSP35520 551 aa11.43□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 NEK2P51955 445 aa11.43□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 RUNDC3AQ59EK9 446 aa11.43□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 DHRS4L2Q6PKH6 230 aa11.43□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 TCAIMQ8N3R3 496 aa11.43□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 ZCCHC7Q8N3Z6 543 aaKnown RBP11.43□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 MCOLN3Q8TDD5 553 aa11.43□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 OSBPL10Q9BXB5 764 aa11.43□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 RDH14Q9HBH5 336 aa11.43□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 ZDHHC3Q9NYG2 299 aa11.43□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 SAMD4AQ9UPU9 718 aaKnown RBP11.43□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 TRIM64A6NGJ6 449 aa11.42□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 CFAP99D6REC4 459 aa11.42□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 CRHBPP24387 322 aa11.42□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 KIR3DL1P43629 444 aa11.42□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 NFATC3Q12968 1075 aa11.42□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 DDX39BQ13838 428 aaKnown RBP11.42□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 FAM117BQ6P1L5 589 aa11.42□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 TSPAN33Q86UF1 283 aa11.42□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 HORMAD1Q86X24 394 aa11.42□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 HS6ST3Q8IZP7 471 aa11.42□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 SETD9Q8NE22 299 aa11.42□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 OR2AP1Q8NGE2 309 aa11.42□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 PYCR2Q96C36 320 aa11.42□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 PANX1Q96RD7 426 aa11.42□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 NODALQ96S42 347 aa11.42□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 KCNH6Q9H252 994 aa11.42□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 IKZF5Q9H5V7 419 aa11.42□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 MRPL17Q9NRX2 175 aaKnown RBP11.42□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 PSME2Q9UL46 239 aa11.42□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 PDYNP01213 254 aa11.42□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 SUSD1Q6UWL2 747 aa11.42□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 ZNF621Q6ZSS3 439 aa11.42□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 SYT12Q8IV01 421 aa11.42□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 ZC3H7AQ8IWR0 971 aaKnown RBP11.42□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 OR10Q1Q8NGQ4 319 aa11.42□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 OR13F1Q8NGS4 319 aa11.42□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 WFDC5Q8TCV5 224 aa11.42□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 TRMT2BQ96GJ1 504 aaKnown RBP11.42□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 SLC22A12Q96S37 553 aa11.42□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 RIBC2Q9H4K1 309 aa11.42□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 KAT8Q9H7Z6 458 aaKnown RBP11.42□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 DCAF13Q9NV06 445 aaKnown RBP11.42□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 SCN3BQ9NY72 215 aa11.42□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 A0A096LPI6 279 aa11.42□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 UPK1AO00322 258 aa11.42□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 BCKDKO14874 412 aa11.42□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 MYO1DO94832 1006 aa11.42□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 IGFBP5P24593 272 aa11.42□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 RECQLP46063 649 aaPredicted RBP11.42□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 CLDN8P56748 225 aa11.42□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 ABHD18Q0P651 414 aa11.42□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 ZCCHC8Q6NZY4 707 aaKnown RBP11.42□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 DOK6Q6PKX4 331 aa11.42□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 CRTC3Q6UUV7 619 aa11.42□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 ZDHHC21Q8IVQ6 265 aa11.42□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 PYURFQ96I23 114 aa11.42□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 SLC25A37Q9NYZ2 338 aa11.42□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 MAGEB3O15480 346 aa11.41□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 PRSS23O95084 383 aa11.41□□□□□ -0.58
CSPG4P3Y-201ENST00000418188 FTH1P02794 183 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms