RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 CDYLQ9Y232 598 aa14.29□□□□□ -0.12
RPS28-201ENST00000417088 R3HDM2Q9Y2K5 976 aaKnown RBP14.29□□□□□ -0.12
RPS28-201ENST00000417088 CCDC162PA2VCL2 907 aa14.28□□□□□ -0.12
RPS28-201ENST00000417088 GOLGA6L9A6NEM1 432 aa14.28□□□□□ -0.12
RPS28-201ENST00000417088 ZSCAN9O15535 394 aaPredicted RBP14.28□□□□□ -0.12
RPS28-201ENST00000417088 KRT86O43790 486 aa14.28□□□□□ -0.12
RPS28-201ENST00000417088 IPO7O95373 1038 aaKnown RBP14.28□□□□□ -0.12
RPS28-201ENST00000417088 ATXN8OSP0DMR3 200 aa14.28□□□□□ -0.12
RPS28-201ENST00000417088 PEBP1P30086 187 aaKnown RBP14.28□□□□□ -0.12
RPS28-201ENST00000417088 FOXL2P58012 376 aa14.28□□□□□ -0.12
RPS28-201ENST00000417088 KLF1Q13351 362 aaPredicted RBP14.28□□□□□ -0.12
RPS28-201ENST00000417088 MYBPC3Q14896 1274 aa14.28□□□□□ -0.12
RPS28-201ENST00000417088 SLC5A12Q1EHB4 618 aa14.28□□□□□ -0.12
RPS28-201ENST00000417088 P3H1Q32P28 736 aa14.28□□□□□ -0.12
RPS28-201ENST00000417088 CCDC38Q502W7 563 aa14.28□□□□□ -0.12
RPS28-201ENST00000417088 DOPEY1Q5JWR5 2465 aa14.28□□□□□ -0.12
RPS28-201ENST00000417088 DCAF10Q5QP82 559 aa14.28□□□□□ -0.12
RPS28-201ENST00000417088 MRPL14Q6P1L8 145 aaKnown RBP14.28□□□□□ -0.12
RPS28-201ENST00000417088 TMEM151BQ8IW70 566 aa14.28□□□□□ -0.12
RPS28-201ENST00000417088 ZNF655Q8N720 491 aaPredicted RBP14.28□□□□□ -0.12
RPS28-201ENST00000417088 CLEC1AQ8NC01 280 aa14.28□□□□□ -0.12
RPS28-201ENST00000417088 OR52K1Q8NGK4 314 aa14.28□□□□□ -0.12
RPS28-201ENST00000417088 OR2Y1Q8NGV0 311 aa14.28□□□□□ -0.12
RPS28-201ENST00000417088 SNRNP40Q96DI7 357 aaKnown RBP14.28□□□□□ -0.12
RPS28-201ENST00000417088 TMEM121Q9BTD3 319 aa14.28□□□□□ -0.12
RPS28-201ENST00000417088 AP1M1Q9BXS5 423 aa14.28□□□□□ -0.12
RPS28-201ENST00000417088 ZNF552Q9H707 407 aaPredicted RBP14.28□□□□□ -0.12
RPS28-201ENST00000417088 P4HTMQ9NXG6 502 aa14.28□□□□□ -0.12
RPS28-201ENST00000417088 CCDC88CQ9P219 2028 aa14.28□□□□□ -0.12
RPS28-201ENST00000417088 NDOR1Q9UHB4 597 aa14.28□□□□□ -0.12
RPS28-201ENST00000417088 SRPK3Q9UPE1 567 aa14.28□□□□□ -0.12
RPS28-201ENST00000417088 TCRBV7S2A1N4TA0A589 114 aa14.27□□□□□ -0.13
RPS28-201ENST00000417088 ISM1B1AKI9 464 aa14.27□□□□□ -0.13
RPS28-201ENST00000417088 MASP2O00187 686 aa14.27□□□□□ -0.13
RPS28-201ENST00000417088 PEX12O00623 359 aa14.27□□□□□ -0.13
RPS28-201ENST00000417088 OR1I1O60431 355 aa14.27□□□□□ -0.13
RPS28-201ENST00000417088 IGHEP01854 428 aa14.27□□□□□ -0.13
RPS28-201ENST00000417088 PTMAP06454 111 aaKnown RBP14.27□□□□□ -0.13
RPS28-201ENST00000417088 CD63P08962 238 aa14.27□□□□□ -0.13
RPS28-201ENST00000417088 OR56A5P0C7T3 313 aa14.27□□□□□ -0.13
RPS28-201ENST00000417088 PLOD1Q02809 727 aaPredicted RBP14.27□□□□□ -0.13
RPS28-201ENST00000417088 SLC9A5Q14940 896 aa14.27□□□□□ -0.13
RPS28-201ENST00000417088 KIR2DS3Q14952 304 aa14.27□□□□□ -0.13
RPS28-201ENST00000417088 NKAIN1Q4KMZ8 207 aa14.27□□□□□ -0.13
RPS28-201ENST00000417088 SYTL3Q4VX76 610 aa14.27□□□□□ -0.13
RPS28-201ENST00000417088 TLDC1Q6P9B6 456 aa14.27□□□□□ -0.13
RPS28-201ENST00000417088 PEX26Q7Z412 305 aa14.27□□□□□ -0.13
RPS28-201ENST00000417088 PPP1R32Q7Z5V6 425 aa14.27□□□□□ -0.13
RPS28-201ENST00000417088 LINC00523Q86TU6 105 aa14.27□□□□□ -0.13
RPS28-201ENST00000417088 FAM20CQ8IXL6 584 aa14.27□□□□□ -0.13
RPS28-201ENST00000417088 IQCKQ8N0W5 287 aa14.27□□□□□ -0.13
RPS28-201ENST00000417088 GALNT16Q8N428 558 aa14.27□□□□□ -0.13
RPS28-201ENST00000417088 ACRBPQ8NEB7 543 aa14.27□□□□□ -0.13
RPS28-201ENST00000417088 OR13J1Q8NGT2 312 aa14.27□□□□□ -0.13
RPS28-201ENST00000417088 PRR7Q8TB68 274 aa14.27□□□□□ -0.13
RPS28-201ENST00000417088 HDAC10Q969S8 669 aa14.27□□□□□ -0.13
RPS28-201ENST00000417088 PTERQ96BW5 349 aa14.27□□□□□ -0.13
RPS28-201ENST00000417088 SLC22A11Q9NSA0 550 aa14.27□□□□□ -0.13
RPS28-201ENST00000417088 TXLNGQ9NUQ3 528 aa14.27□□□□□ -0.13
RPS28-201ENST00000417088 ASF1BQ9NVP2 202 aa14.27□□□□□ -0.13
RPS28-201ENST00000417088 IMPACTQ9P2X3 320 aa14.27□□□□□ -0.13
RPS28-201ENST00000417088 AMFRQ9UKV5 643 aa14.27□□□□□ -0.13
RPS28-201ENST00000417088 PACSIN2Q9UNF0 486 aaPredicted RBP14.27□□□□□ -0.13
RPS28-201ENST00000417088 PLCL2Q9UPR0 1127 aa14.27□□□□□ -0.13
RPS28-201ENST00000417088 B3GNT3Q9Y2A9 372 aa14.27□□□□□ -0.13
RPS28-201ENST00000417088 SNRNP200O75643 2136 aaKnown RBP14.26□□□□□ -0.13
RPS28-201ENST00000417088 ANKRD12Q6UB98 2062 aa14.26□□□□□ -0.13
RPS28-201ENST00000417088 DDAH2O95865 285 aa14.26□□□□□ -0.13
RPS28-201ENST00000417088 GOT2P00505 430 aaKnown RBP14.26□□□□□ -0.13
RPS28-201ENST00000417088 UMODP07911 640 aa14.26□□□□□ -0.13
RPS28-201ENST00000417088 PKLRP30613 574 aa14.26□□□□□ -0.13
RPS28-201ENST00000417088 CCR7P32248 378 aa14.26□□□□□ -0.13
RPS28-201ENST00000417088 GCGRP47871 477 aa14.26□□□□□ -0.13
RPS28-201ENST00000417088 CSE1LP55060 971 aaKnown RBP14.26□□□□□ -0.13
RPS28-201ENST00000417088 NR6A1Q15406 480 aa14.26□□□□□ -0.13
RPS28-201ENST00000417088 DNAJC21Q5F1R6 531 aaKnown RBP14.26□□□□□ -0.13
RPS28-201ENST00000417088 LYPLAL1Q5VWZ2 237 aa14.26□□□□□ -0.13
RPS28-201ENST00000417088 IGFL3Q6UXB1 125 aa14.26□□□□□ -0.13
RPS28-201ENST00000417088 CISD2Q8N5K1 135 aaKnown RBP14.26□□□□□ -0.13
RPS28-201ENST00000417088 UBL4BQ8N7F7 174 aa14.26□□□□□ -0.13
RPS28-201ENST00000417088 NDC1Q9BTX1 674 aa14.26□□□□□ -0.13
RPS28-201ENST00000417088 IRAK4Q9NWZ3 460 aa14.26□□□□□ -0.13
RPS28-201ENST00000417088 EURLQ9NYK6 297 aa14.26□□□□□ -0.13
RPS28-201ENST00000417088 SLC2A6Q9UGQ3 507 aa14.26□□□□□ -0.13
RPS28-201ENST00000417088 KLHL20Q9Y2M5 609 aa14.26□□□□□ -0.13
RPS28-201ENST00000417088 A1L4Q6 167 aa14.25□□□□□ -0.13
RPS28-201ENST00000417088 HEATR9A2RTY3 570 aa14.25□□□□□ -0.13
RPS28-201ENST00000417088 MIF4GDA9UHW6 222 aaKnown RBP14.25□□□□□ -0.13
RPS28-201ENST00000417088 KDM1AO60341 852 aa14.25□□□□□ -0.13
RPS28-201ENST00000417088 CBX6O95503 412 aa14.25□□□□□ -0.13
RPS28-201ENST00000417088 FTCDO95954 541 aa14.25□□□□□ -0.13
RPS28-201ENST00000417088 ALPPP05187 535 aa14.25□□□□□ -0.13
RPS28-201ENST00000417088 MAGP20916 626 aa14.25□□□□□ -0.13
RPS28-201ENST00000417088 GRIA1P42261 906 aa14.25□□□□□ -0.13
RPS28-201ENST00000417088 RAB28P51157 221 aa14.25□□□□□ -0.13
RPS28-201ENST00000417088 ZNF75DP51815 510 aa14.25□□□□□ -0.13
RPS28-201ENST00000417088 SOX8P57073 446 aa14.25□□□□□ -0.13
RPS28-201ENST00000417088 CDH17Q12864 832 aa14.25□□□□□ -0.13
RPS28-201ENST00000417088 CRB2Q5IJ48 1285 aa14.25□□□□□ -0.13
RPS28-201ENST00000417088 TSTD2Q5T7W7 516 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms