RNA–Protein interactions for RNA: ENST00000415395.6

RFFL-205, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 1,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-205ENST00000415395 CYP2R1Q6VVX0 501 aa11.32□□□□□ -0.6
RFFL-205ENST00000415395 RFLNAQ6ZTI6 216 aa11.32□□□□□ -0.6
RFFL-205ENST00000415395 SPATA19Q7Z5L4 167 aa11.32□□□□□ -0.6
RFFL-205ENST00000415395 FAM47BQ8NA70 645 aa11.32□□□□□ -0.6
RFFL-205ENST00000415395 SIDT2Q8NBJ9 832 aaKnown RBP11.32□□□□□ -0.6
RFFL-205ENST00000415395 ADAMTS16Q8TE57 1224 aa11.32□□□□□ -0.6
RFFL-205ENST00000415395 BTN2A2Q8WVV5 523 aa11.32□□□□□ -0.6
RFFL-205ENST00000415395 SLCO4A1Q96BD0 722 aa11.32□□□□□ -0.6
RFFL-205ENST00000415395 PHF21BQ96EK2 531 aa11.32□□□□□ -0.6
RFFL-205ENST00000415395 CENPNQ96H22 339 aaPredicted RBP11.32□□□□□ -0.6
RFFL-205ENST00000415395 KCNK12Q9HB15 430 aa11.32□□□□□ -0.6
RFFL-205ENST00000415395 PREBQ9HCU5 417 aa11.32□□□□□ -0.6
RFFL-205ENST00000415395 IRAK4Q9NWZ3 460 aa11.32□□□□□ -0.6
RFFL-205ENST00000415395 PIAS3Q9Y6X2 628 aa11.32□□□□□ -0.6
RFFL-205ENST00000415395 NEMP2A6NFY4 417 aa11.32□□□□□ -0.6
RFFL-205ENST00000415395 NR5A2O00482 541 aa11.32□□□□□ -0.6
RFFL-205ENST00000415395 KPNA5O15131 536 aa11.32□□□□□ -0.6
RFFL-205ENST00000415395 TSPAN6O43657 245 aa11.32□□□□□ -0.6
RFFL-205ENST00000415395 TIPRLO75663 272 aa11.32□□□□□ -0.6
RFFL-205ENST00000415395 SLC25A14O95258 325 aaPredicted RBP11.32□□□□□ -0.6
RFFL-205ENST00000415395 CHEK2O96017 543 aa11.32□□□□□ -0.6
RFFL-205ENST00000415395 ATP1B2P14415 290 aaPredicted RBP11.32□□□□□ -0.6
RFFL-205ENST00000415395 CD1EP15812 388 aa11.32□□□□□ -0.6
RFFL-205ENST00000415395 GPX3P22352 226 aa11.32□□□□□ -0.6
RFFL-205ENST00000415395 HMOX2P30519 316 aa11.32□□□□□ -0.6
RFFL-205ENST00000415395 P2RY2P41231 377 aa11.32□□□□□ -0.6
RFFL-205ENST00000415395 MRPL19P49406 292 aaKnown RBP11.32□□□□□ -0.6
RFFL-205ENST00000415395 MRPS21P82921 87 aaKnown RBP11.32□□□□□ -0.6
RFFL-205ENST00000415395 GRSF1Q12849 480 aaKnown RBP eCLIP11.32□□□□□ -0.6
RFFL-205ENST00000415395 STARD3Q14849 445 aa11.32□□□□□ -0.6
RFFL-205ENST00000415395 PIP5KL1Q5T9C9 394 aa11.32□□□□□ -0.6
RFFL-205ENST00000415395 ZNF776Q68DI1 518 aaPredicted RBP11.32□□□□□ -0.6
RFFL-205ENST00000415395 TXNDC11Q6PKC3 985 aa11.32□□□□□ -0.6
RFFL-205ENST00000415395 ABRAXAS1Q6UWZ7 409 aa11.32□□□□□ -0.6
RFFL-205ENST00000415395 PRR23BQ6ZRT6 265 aa11.32□□□□□ -0.6
RFFL-205ENST00000415395 ZNF786Q8N393 782 aa11.32□□□□□ -0.6
RFFL-205ENST00000415395 SLC44A3Q8N4M1 653 aa11.32□□□□□ -0.6
RFFL-205ENST00000415395 HMGCLL1Q8TB92 370 aa11.32□□□□□ -0.6
RFFL-205ENST00000415395 CXorf40AQ8TE69 158 aa11.32□□□□□ -0.6
RFFL-205ENST00000415395 AP2M1Q96CW1 435 aa11.32□□□□□ -0.6
RFFL-205ENST00000415395 LINGO1Q96FE5 620 aa11.32□□□□□ -0.6
RFFL-205ENST00000415395 SLC30A3Q99726 388 aa11.32□□□□□ -0.6
RFFL-205ENST00000415395 GPATCH1Q9BRR8 931 aaKnown RBP11.32□□□□□ -0.6
RFFL-205ENST00000415395 ADI1Q9BV57 179 aa11.32□□□□□ -0.6
RFFL-205ENST00000415395 RIOK2Q9BVS4 552 aaKnown RBP11.32□□□□□ -0.6
RFFL-205ENST00000415395 NUSAP1Q9BXS6 441 aaKnown RBP11.32□□□□□ -0.6
RFFL-205ENST00000415395 OSBPL6Q9BZF3 934 aa11.32□□□□□ -0.6
RFFL-205ENST00000415395 ABCG8Q9H221 673 aa11.32□□□□□ -0.6
RFFL-205ENST00000415395 AGPAT4Q9NRZ5 378 aa11.32□□□□□ -0.6
RFFL-205ENST00000415395 OLAHQ9NV23 265 aa11.32□□□□□ -0.6
RFFL-205ENST00000415395 ZNHIT2Q9UHR6 403 aa11.32□□□□□ -0.6
RFFL-205ENST00000415395 CD84Q9UIB8 345 aa11.32□□□□□ -0.6
RFFL-205ENST00000415395 RNF112Q9ULX5 631 aa11.32□□□□□ -0.6
RFFL-205ENST00000415395 AURKCQ9UQB9 309 aa11.32□□□□□ -0.6
RFFL-205ENST00000415395 FADS3Q9Y5Q0 445 aa11.32□□□□□ -0.6
RFFL-205ENST00000415395 PRSS21Q9Y6M0 314 aa11.32□□□□□ -0.6
RFFL-205ENST00000415395 A0A0J9YVX5 310 aa11.31□□□□□ -0.6
RFFL-205ENST00000415395 RASAL1O95294 804 aa11.31□□□□□ -0.6
RFFL-205ENST00000415395 NPPAP01160 153 aa11.31□□□□□ -0.6
RFFL-205ENST00000415395 C6P13671 934 aa11.31□□□□□ -0.6
RFFL-205ENST00000415395 TIE1P35590 1138 aa11.31□□□□□ -0.6
RFFL-205ENST00000415395 METAP1P53582 386 aa11.31□□□□□ -0.6
RFFL-205ENST00000415395 KCNK10P57789 538 aa11.31□□□□□ -0.6
RFFL-205ENST00000415395 B4GALNT1Q00973 533 aa11.31□□□□□ -0.6
RFFL-205ENST00000415395 CNTN1Q12860 1018 aa11.31□□□□□ -0.6
RFFL-205ENST00000415395 MERTKQ12866 999 aa11.31□□□□□ -0.6
RFFL-205ENST00000415395 TMED1Q13445 227 aa11.31□□□□□ -0.6
RFFL-205ENST00000415395 MYBPC3Q14896 1274 aa11.31□□□□□ -0.6
RFFL-205ENST00000415395 OR4D1Q15615 310 aa11.31□□□□□ -0.6
RFFL-205ENST00000415395 ATP6AP1Q15904 470 aa11.31□□□□□ -0.6
RFFL-205ENST00000415395 FBXO43Q4G163 708 aa11.31□□□□□ -0.6
RFFL-205ENST00000415395 KANK2Q63ZY3 851 aa11.31□□□□□ -0.6
RFFL-205ENST00000415395 HMBOX1Q6NT76 420 aa11.31□□□□□ -0.6
RFFL-205ENST00000415395 LAYNQ6UX15 382 aa11.31□□□□□ -0.6
RFFL-205ENST00000415395 FKBP9P1Q75LS8 142 aa11.31□□□□□ -0.6
RFFL-205ENST00000415395 ADAMTSL2Q86TH1 951 aa11.31□□□□□ -0.6
RFFL-205ENST00000415395 CPNE9Q8IYJ1 553 aa11.31□□□□□ -0.6
RFFL-205ENST00000415395 TBC1D21Q8IYX1 336 aa11.31□□□□□ -0.6
RFFL-205ENST00000415395 ZBTB2Q8N680 514 aa11.31□□□□□ -0.6
RFFL-205ENST00000415395 EEF1AKMT1Q8WVE0 214 aa11.31□□□□□ -0.6
RFFL-205ENST00000415395 CANT1Q8WVQ1 401 aa11.31□□□□□ -0.6
RFFL-205ENST00000415395 SCAMP4Q969E2 229 aa11.31□□□□□ -0.6
RFFL-205ENST00000415395 GLYATL1Q969I3 302 aa11.31□□□□□ -0.6
RFFL-205ENST00000415395 ITFG2Q969R8 447 aa11.31□□□□□ -0.6
RFFL-205ENST00000415395 FAM131CQ96AQ9 280 aa11.31□□□□□ -0.6
RFFL-205ENST00000415395 NUS1Q96E22 293 aa11.31□□□□□ -0.6
RFFL-205ENST00000415395 CNDP2Q96KP4 475 aaKnown RBP11.31□□□□□ -0.6
RFFL-205ENST00000415395 TUBA1CQ9BQE3 449 aa11.31□□□□□ -0.6
RFFL-205ENST00000415395 UNKQ9C0B0 810 aaKnown RBP11.31□□□□□ -0.6
RFFL-205ENST00000415395 TRIOBPQ9H2D6 2365 aa11.31□□□□□ -0.6
RFFL-205ENST00000415395 OCEL1Q9H607 264 aa11.31□□□□□ -0.6
RFFL-205ENST00000415395 EPHX3Q9H6B9 360 aa11.31□□□□□ -0.6
RFFL-205ENST00000415395 TBC1D23Q9NUY8 699 aa11.31□□□□□ -0.6
RFFL-205ENST00000415395 TMEM9Q9P0T7 183 aa11.31□□□□□ -0.6
RFFL-205ENST00000415395 GALPQ9UBC7 116 aa11.31□□□□□ -0.6
RFFL-205ENST00000415395 TMPRSS11EQ9UL52 423 aa11.31□□□□□ -0.6
RFFL-205ENST00000415395 SCML1Q9UN30 329 aa11.31□□□□□ -0.6
RFFL-205ENST00000415395 PCDHGB4Q9UN71 923 aa11.31□□□□□ -0.6
RFFL-205ENST00000415395 ITM2BQ9Y287 266 aa11.31□□□□□ -0.6
RFFL-205ENST00000415395 PCDHGB5Q9Y5G0 923 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms