RNA–Protein interactions for RNA: ENST00000415188.1

USP4-203, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 3 BASIC

Gene USP4, Length 1,454 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-203ENST00000415188 PRKG2Q13237 762 aa14.49□□□□□ -0.09
USP4-203ENST00000415188 MAD2L1Q13257 205 aaPredicted RBP14.49□□□□□ -0.09
USP4-203ENST00000415188 FXNQ16595 210 aa14.49□□□□□ -0.09
USP4-203ENST00000415188 CDKN3Q16667 212 aa14.49□□□□□ -0.09
USP4-203ENST00000415188 INTS11Q5TA45 600 aaKnown RBP14.49□□□□□ -0.09
USP4-203ENST00000415188 SULT1C3Q6IMI6 304 aa14.49□□□□□ -0.09
USP4-203ENST00000415188 PPP4R4Q6NUP7 873 aa14.49□□□□□ -0.09
USP4-203ENST00000415188 SLC30A9Q6PML9 568 aa14.49□□□□□ -0.09
USP4-203ENST00000415188 FAM151BQ6UXP7 276 aa14.49□□□□□ -0.09
USP4-203ENST00000415188 CYP2R1Q6VVX0 501 aa14.49□□□□□ -0.09
USP4-203ENST00000415188 GOLGA7Q7Z5G4 137 aa14.49□□□□□ -0.09
USP4-203ENST00000415188 CAMK1DQ8IU85 385 aa14.49□□□□□ -0.09
USP4-203ENST00000415188 CHERPQ8IWX8 916 aaKnown RBP14.49□□□□□ -0.09
USP4-203ENST00000415188 APCDD1Q8J025 514 aa14.49□□□□□ -0.09
USP4-203ENST00000415188 GALNT15Q8N3T1 639 aa14.49□□□□□ -0.09
USP4-203ENST00000415188 GALNT4Q8N4A0 578 aa14.49□□□□□ -0.09
USP4-203ENST00000415188 CAMKK1Q8N5S9 505 aa14.49□□□□□ -0.09
USP4-203ENST00000415188 ZBTB2Q8N680 514 aa14.49□□□□□ -0.09
USP4-203ENST00000415188 KIAA1958Q8N8K9 716 aa14.49□□□□□ -0.09
USP4-203ENST00000415188 CDYL2Q8N8U2 506 aa14.49□□□□□ -0.09
USP4-203ENST00000415188 PPP3R2Q96LZ3 170 aa14.49□□□□□ -0.09
USP4-203ENST00000415188 SLC39A3Q9BRY0 314 aa14.49□□□□□ -0.09
USP4-203ENST00000415188 CIPCQ9C0C6 399 aa14.49□□□□□ -0.09
USP4-203ENST00000415188 NOL11Q9H8H0 719 aaKnown RBP14.49□□□□□ -0.09
USP4-203ENST00000415188 UBAP1Q9NZ09 502 aa14.49□□□□□ -0.09
USP4-203ENST00000415188 EVLQ9UI08 416 aaPredicted RBP14.49□□□□□ -0.09
USP4-203ENST00000415188 CRLS1Q9UJA2 301 aa14.49□□□□□ -0.09
USP4-203ENST00000415188 FNDC3AQ9Y2H6 1198 aaKnown RBP14.49□□□□□ -0.09
USP4-203ENST00000415188 LRP3O75074 770 aa14.48□□□□□ -0.09
USP4-203ENST00000415188 ENO2P09104 434 aaPredicted RBP14.48□□□□□ -0.09
USP4-203ENST00000415188 ADH5P11766 374 aa14.48□□□□□ -0.09
USP4-203ENST00000415188 CCNHP51946 323 aaPredicted RBP14.48□□□□□ -0.09
USP4-203ENST00000415188 LMAN2Q12907 356 aa14.48□□□□□ -0.09
USP4-203ENST00000415188 CSRP2Q16527 193 aa14.48□□□□□ -0.09
USP4-203ENST00000415188 PLEKHG6Q3KR16 790 aa14.48□□□□□ -0.09
USP4-203ENST00000415188 LY6G5CQ5SRR4 150 aa14.48□□□□□ -0.09
USP4-203ENST00000415188 GPRC6AQ5T6X5 926 aa14.48□□□□□ -0.09
USP4-203ENST00000415188 LETMD1Q6P1Q0 360 aa14.48□□□□□ -0.09
USP4-203ENST00000415188 PRR23CQ6ZRP0 262 aa14.48□□□□□ -0.09
USP4-203ENST00000415188 TPGS1Q6ZTW0 290 aa14.48□□□□□ -0.09
USP4-203ENST00000415188 PROSER1Q86XN7 944 aa14.48□□□□□ -0.09
USP4-203ENST00000415188 FNDC5Q8NAU1 212 aa14.48□□□□□ -0.09
USP4-203ENST00000415188 OR2AP1Q8NGE2 309 aa14.48□□□□□ -0.09
USP4-203ENST00000415188 OR2T11Q8NH01 316 aa14.48□□□□□ -0.09
USP4-203ENST00000415188 METTL6Q8TCB7 284 aa14.48□□□□□ -0.09
USP4-203ENST00000415188 PPWD1Q96BP3 646 aaKnown RBP14.48□□□□□ -0.09
USP4-203ENST00000415188 TM6SF2Q9BZW4 377 aa14.48□□□□□ -0.09
USP4-203ENST00000415188 ARRDC1-AS1Q9H2J1 176 aa14.48□□□□□ -0.09
USP4-203ENST00000415188 COQ10BQ9H8M1 238 aa14.48□□□□□ -0.09
USP4-203ENST00000415188 IL1RL2Q9HB29 575 aa14.48□□□□□ -0.09
USP4-203ENST00000415188 IL26Q9NPH9 171 aa14.48□□□□□ -0.09
USP4-203ENST00000415188 PPIL1Q9Y3C6 166 aa14.48□□□□□ -0.09
USP4-203ENST00000415188 KIAA1549LQ6ZVL6 1849 aa14.48□□□□□ -0.09
USP4-203ENST00000415188 MYOFQ9NZM1 2061 aa14.47□□□□□ -0.09
USP4-203ENST00000415188 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.47□□□□□ -0.09
USP4-203ENST00000415188 DCDC2BA2VCK2 349 aa14.47□□□□□ -0.09
USP4-203ENST00000415188 AGAP14A8MT82 685 aa14.47□□□□□ -0.09
USP4-203ENST00000415188 K7ERQ8 282 aa14.47□□□□□ -0.09
USP4-203ENST00000415188 SLC28A1O00337 649 aa14.47□□□□□ -0.09
USP4-203ENST00000415188 ARPC2O15144 300 aa14.47□□□□□ -0.09
USP4-203ENST00000415188 GDF9O60383 454 aa14.47□□□□□ -0.09
USP4-203ENST00000415188 APBB3O95704 486 aa14.47□□□□□ -0.09
USP4-203ENST00000415188 ADH1CP00326 375 aa14.47□□□□□ -0.09
USP4-203ENST00000415188 CAPN1P07384 714 aa14.47□□□□□ -0.09
USP4-203ENST00000415188 CHRM1P11229 460 aaPredicted RBP14.47□□□□□ -0.09
USP4-203ENST00000415188 BPIP17213 487 aa14.47□□□□□ -0.09
USP4-203ENST00000415188 FASP25445 335 aa14.47□□□□□ -0.09
USP4-203ENST00000415188 HTR1EP28566 365 aa14.47□□□□□ -0.09
USP4-203ENST00000415188 HMOX2P30519 316 aa14.47□□□□□ -0.09
USP4-203ENST00000415188 HNF1BP35680 557 aa14.47□□□□□ -0.09
USP4-203ENST00000415188 GSK3BP49841 420 aa14.47□□□□□ -0.09
USP4-203ENST00000415188 UFM1P61960 85 aa14.47□□□□□ -0.09
USP4-203ENST00000415188 CDKL1Q00532 357 aa14.47□□□□□ -0.09
USP4-203ENST00000415188 ROR2Q01974 943 aaKnown RBP14.47□□□□□ -0.09
USP4-203ENST00000415188 TRAF3Q13114 568 aa14.47□□□□□ -0.09
USP4-203ENST00000415188 MTX3Q5HYI7 312 aa14.47□□□□□ -0.09
USP4-203ENST00000415188 TBCELQ5QJ74 424 aa14.47□□□□□ -0.09
USP4-203ENST00000415188 C6orf52Q5T4I8 152 aa14.47□□□□□ -0.09
USP4-203ENST00000415188 HMBOX1Q6NT76 420 aa14.47□□□□□ -0.09
USP4-203ENST00000415188 Q6ZSR9 355 aa14.47□□□□□ -0.09
USP4-203ENST00000415188 BBS7Q8IWZ6 715 aa14.47□□□□□ -0.09
USP4-203ENST00000415188 NXPE1Q8N323 547 aa14.47□□□□□ -0.09
USP4-203ENST00000415188 PAF1Q8N7H5 531 aa14.47□□□□□ -0.09
USP4-203ENST00000415188 ZNF557Q8N988 423 aaPredicted RBP14.47□□□□□ -0.09
USP4-203ENST00000415188 MFSD2AQ8NA29 543 aa14.47□□□□□ -0.09
USP4-203ENST00000415188 PAPD5Q8NDF8 572 aaKnown RBP14.47□□□□□ -0.09
USP4-203ENST00000415188 OR52B6Q8NGF0 335 aa14.47□□□□□ -0.09
USP4-203ENST00000415188 CANT1Q8WVQ1 401 aa14.47□□□□□ -0.09
USP4-203ENST00000415188 ULK4Q96C45 1275 aa14.47□□□□□ -0.09
USP4-203ENST00000415188 CNBD2Q96M20 576 aa14.47□□□□□ -0.09
USP4-203ENST00000415188 KCTD14Q9BQ13 255 aaPredicted RBP14.47□□□□□ -0.09
USP4-203ENST00000415188 SLC29A3Q9BZD2 475 aa14.47□□□□□ -0.09
USP4-203ENST00000415188 CEP44Q9C0F1 390 aa14.47□□□□□ -0.09
USP4-203ENST00000415188 ALG2Q9H553 416 aa14.47□□□□□ -0.09
USP4-203ENST00000415188 PAPOLBQ9NRJ5 636 aaKnown RBP14.47□□□□□ -0.09
USP4-203ENST00000415188 KCTD5Q9NXV2 234 aa14.47□□□□□ -0.09
USP4-203ENST00000415188 ASIC5Q9NY37 505 aa14.47□□□□□ -0.09
USP4-203ENST00000415188 TBC1D14Q9P2M4 693 aa14.47□□□□□ -0.09
USP4-203ENST00000415188 TRPS1Q9UHF7 1281 aa14.47□□□□□ -0.09
USP4-203ENST00000415188 INVSQ9Y283 1065 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms