RNA–Protein interactions for RNA: ENST00000414802.5

CNOT4-204, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 1,687 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-204ENST00000414802 PLCL1Q15111 1095 aa12.74□□□□□ -0.37
CNOT4-204ENST00000414802 TGFBIQ15582 683 aa12.74□□□□□ -0.37
CNOT4-204ENST00000414802 HSP90B2PQ58FF3 399 aa12.74□□□□□ -0.37
CNOT4-204ENST00000414802 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.74□□□□□ -0.37
CNOT4-204ENST00000414802 C2orf73Q8N5S3 287 aaPredicted RBP12.74□□□□□ -0.37
CNOT4-204ENST00000414802 PPFIBP2Q8ND30 876 aa12.74□□□□□ -0.37
CNOT4-204ENST00000414802 RHEBL1Q8TAI7 183 aa12.74□□□□□ -0.37
CNOT4-204ENST00000414802 STAG3L4Q8TBR4 150 aa12.74□□□□□ -0.37
CNOT4-204ENST00000414802 MCOLN3Q8TDD5 553 aa12.74□□□□□ -0.37
CNOT4-204ENST00000414802 EGFL8Q99944 293 aa12.74□□□□□ -0.37
CNOT4-204ENST00000414802 TBC1D10AQ9BXI6 508 aa12.74□□□□□ -0.37
CNOT4-204ENST00000414802 KIR3DX1Q9H7L2 352 aa12.74□□□□□ -0.37
CNOT4-204ENST00000414802 SLC40A1Q9NP59 571 aa12.74□□□□□ -0.37
CNOT4-204ENST00000414802 SSU72Q9NP77 194 aaKnown RBP12.74□□□□□ -0.37
CNOT4-204ENST00000414802 ARL15Q9NXU5 204 aa12.74□□□□□ -0.37
CNOT4-204ENST00000414802 CD274Q9NZQ7 290 aa12.74□□□□□ -0.37
CNOT4-204ENST00000414802 GRID1Q9ULK0 1009 aa12.74□□□□□ -0.37
CNOT4-204ENST00000414802 ICKQ9UPZ9 632 aa12.74□□□□□ -0.37
CNOT4-204ENST00000414802 PLLPQ9Y342 182 aa12.74□□□□□ -0.37
CNOT4-204ENST00000414802 PCDHGB2Q9Y5G2 931 aa12.74□□□□□ -0.37
CNOT4-204ENST00000414802 COLEC10Q9Y6Z7 277 aa12.74□□□□□ -0.37
CNOT4-204ENST00000414802 MYO1CO00159 1063 aa12.73□□□□□ -0.37
CNOT4-204ENST00000414802 PRPF4O43172 522 aaKnown RBP eCLIP12.73□□□□□ -0.37
CNOT4-204ENST00000414802 SH3BP5O60239 455 aa12.73□□□□□ -0.37
CNOT4-204ENST00000414802 ENO2P09104 434 aaPredicted RBP12.73□□□□□ -0.37
CNOT4-204ENST00000414802 RBP1P09455 135 aa12.73□□□□□ -0.37
CNOT4-204ENST00000414802 IMPA1P29218 277 aa12.73□□□□□ -0.37
CNOT4-204ENST00000414802 GRK6P43250 576 aa12.73□□□□□ -0.37
CNOT4-204ENST00000414802 SUZ12Q15022 739 aaKnown RBP12.73□□□□□ -0.37
CNOT4-204ENST00000414802 NR0B2Q15466 257 aa12.73□□□□□ -0.37
CNOT4-204ENST00000414802 GUSBP11Q6P575 273 aa12.73□□□□□ -0.37
CNOT4-204ENST00000414802 TTC23LQ6PF05 361 aa12.73□□□□□ -0.37
CNOT4-204ENST00000414802 TMEM26Q6ZUK4 368 aa12.73□□□□□ -0.37
CNOT4-204ENST00000414802 LCA5Q86VQ0 697 aa12.73□□□□□ -0.37
CNOT4-204ENST00000414802 NAXDQ8IW45 347 aa12.73□□□□□ -0.37
CNOT4-204ENST00000414802 TMEM151AQ8N4L1 468 aa12.73□□□□□ -0.37
CNOT4-204ENST00000414802 OR9A1PQ8NGU1 263 aa12.73□□□□□ -0.37
CNOT4-204ENST00000414802 DENND1AQ8TEH3 1009 aa12.73□□□□□ -0.37
CNOT4-204ENST00000414802 PKNOX2Q96KN3 472 aa12.73□□□□□ -0.37
CNOT4-204ENST00000414802 STN1Q9H668 368 aaKnown RBP12.73□□□□□ -0.37
CNOT4-204ENST00000414802 ABCF3Q9NUQ8 709 aa12.73□□□□□ -0.37
CNOT4-204ENST00000414802 NUDT4Q9NZJ9 180 aa12.73□□□□□ -0.37
CNOT4-204ENST00000414802 STOX2Q9P2F5 926 aaPredicted RBP12.73□□□□□ -0.37
CNOT4-204ENST00000414802 PADI4Q9UM07 663 aa12.73□□□□□ -0.37
CNOT4-204ENST00000414802 COL27A1Q8IZC6 1860 aaPredicted RBP12.73□□□□□ -0.37
CNOT4-204ENST00000414802 ADAMTS20P59510 1910 aa12.73□□□□□ -0.37
CNOT4-204ENST00000414802 SPTBP11277 2137 aa12.73□□□□□ -0.37
CNOT4-204ENST00000414802 SPEGQ15772 3267 aa12.73□□□□□ -0.37
CNOT4-204ENST00000414802 CPED1A4D0V7 1026 aa12.73□□□□□ -0.37
CNOT4-204ENST00000414802 LRRC14BA6NHZ5 514 aa12.73□□□□□ -0.37
CNOT4-204ENST00000414802 RHPN2P1A8MT19 583 aa12.73□□□□□ -0.37
CNOT4-204ENST00000414802 TARM1B6A8C7 271 aa12.73□□□□□ -0.37
CNOT4-204ENST00000414802 CASC3O15234 703 aaKnown RBP12.73□□□□□ -0.37
CNOT4-204ENST00000414802 FLRT2O43155 660 aa12.73□□□□□ -0.37
CNOT4-204ENST00000414802 SLC16A8O95907 504 aa12.73□□□□□ -0.37
CNOT4-204ENST00000414802 S100BP04271 92 aaPredicted RBP12.73□□□□□ -0.37
CNOT4-204ENST00000414802 HIST1H2AGP0C0S8 130 aaPredicted RBP12.73□□□□□ -0.37
CNOT4-204ENST00000414802 MTHFD2P13995 350 aa12.73□□□□□ -0.37
CNOT4-204ENST00000414802 GFAPP14136 432 aa12.73□□□□□ -0.37
CNOT4-204ENST00000414802 HIST1H2ADP20671 130 aa12.73□□□□□ -0.37
CNOT4-204ENST00000414802 NDUFS1P28331 727 aa12.73□□□□□ -0.37
CNOT4-204ENST00000414802 PKLRP30613 574 aa12.73□□□□□ -0.37
CNOT4-204ENST00000414802 FASLGP48023 281 aa12.73□□□□□ -0.37
CNOT4-204ENST00000414802 DAB2P98082 770 aa12.73□□□□□ -0.37
CNOT4-204ENST00000414802 TSTA3Q13630 321 aaPredicted RBP12.73□□□□□ -0.37
CNOT4-204ENST00000414802 FASTKQ14296 549 aaKnown RBP12.73□□□□□ -0.37
CNOT4-204ENST00000414802 PROX2Q3B8N5 592 aa12.73□□□□□ -0.37
CNOT4-204ENST00000414802 INAVAQ3KP66 663 aa12.73□□□□□ -0.37
CNOT4-204ENST00000414802 CCDC153Q494R4 210 aa12.73□□□□□ -0.37
CNOT4-204ENST00000414802 PERM1Q5SV97 790 aa12.73□□□□□ -0.37
CNOT4-204ENST00000414802 STPG1Q5TH74 334 aa12.73□□□□□ -0.37
CNOT4-204ENST00000414802 FBXO15Q8NCQ5 510 aaPredicted RBP12.73□□□□□ -0.37
CNOT4-204ENST00000414802 RHBDD1Q8TEB9 315 aa12.73□□□□□ -0.37
CNOT4-204ENST00000414802 LCN9Q8WX39 176 aa12.73□□□□□ -0.37
CNOT4-204ENST00000414802 CCDC74AQ96AQ1 378 aa12.73□□□□□ -0.37
CNOT4-204ENST00000414802 RAD51AP1Q96B01 352 aa12.73□□□□□ -0.37
CNOT4-204ENST00000414802 PHF21BQ96EK2 531 aa12.73□□□□□ -0.37
CNOT4-204ENST00000414802 HIST1H2AHQ96KK5 128 aa12.73□□□□□ -0.37
CNOT4-204ENST00000414802 CNDP2Q96KP4 475 aaKnown RBP12.73□□□□□ -0.37
CNOT4-204ENST00000414802 HIST1H2AJQ99878 128 aa12.73□□□□□ -0.37
CNOT4-204ENST00000414802 H2AFJQ9BTM1 129 aa12.73□□□□□ -0.37
CNOT4-204ENST00000414802 MENTQ9BUN1 341 aa12.73□□□□□ -0.37
CNOT4-204ENST00000414802 MECRQ9BV79 373 aa12.73□□□□□ -0.37
CNOT4-204ENST00000414802 TRIM54Q9BYV2 358 aa12.73□□□□□ -0.37
CNOT4-204ENST00000414802 ATG10Q9H0Y0 220 aa12.73□□□□□ -0.37
CNOT4-204ENST00000414802 RDH14Q9HBH5 336 aa12.73□□□□□ -0.37
CNOT4-204ENST00000414802 MED4Q9NPJ6 270 aa12.73□□□□□ -0.37
CNOT4-204ENST00000414802 ACSS2Q9NR19 701 aa12.73□□□□□ -0.37
CNOT4-204ENST00000414802 WWOXQ9NZC7 414 aa12.73□□□□□ -0.37
CNOT4-204ENST00000414802 LRIT1Q9P2V4 623 aa12.73□□□□□ -0.37
CNOT4-204ENST00000414802 POLG2Q9UHN1 485 aa12.73□□□□□ -0.37
CNOT4-204ENST00000414802 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.72□□□□□ -0.37
CNOT4-204ENST00000414802 SYCE1LA8MT33 242 aa12.72□□□□□ -0.37
CNOT4-204ENST00000414802 A8MT66 165 aa12.72□□□□□ -0.37
CNOT4-204ENST00000414802 G3V2L1 256 aa12.72□□□□□ -0.37
CNOT4-204ENST00000414802 GFRA3O60609 400 aa12.72□□□□□ -0.37
CNOT4-204ENST00000414802 SMIM24O75264 130 aa12.72□□□□□ -0.37
CNOT4-204ENST00000414802 MYL2P10916 166 aa12.72□□□□□ -0.37
CNOT4-204ENST00000414802 PPM1FP49593 454 aaPredicted RBP12.72□□□□□ -0.37
CNOT4-204ENST00000414802 AGTR2P50052 363 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms