RNA–Protein interactions for RNA: ENST00000414411.3

DDB1-202, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,904 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-202ENST00000414411 NDE1Q9NXR1 346 aa9.74□□□□□ -0.85
DDB1-202ENST00000414411 GPR34Q9UPC5 381 aa9.74□□□□□ -0.85
DDB1-202ENST00000414411 LRCH1Q9Y2L9 728 aa9.74□□□□□ -0.85
DDB1-202ENST00000414411 PCYT1BQ9Y5K3 369 aaPredicted RBP9.74□□□□□ -0.85
DDB1-202ENST00000414411 TDRD6O60522 2096 aaKnown RBP9.73□□□□□ -0.85
DDB1-202ENST00000414411 LRP4O75096 1905 aa9.73□□□□□ -0.85
DDB1-202ENST00000414411 A0A1B0GTW7 788 aa9.73□□□□□ -0.85
DDB1-202ENST00000414411 NEMP2A6NFY4 417 aa9.73□□□□□ -0.85
DDB1-202ENST00000414411 WISP3O95389 354 aaPredicted RBP9.73□□□□□ -0.85
DDB1-202ENST00000414411 LTA4HP09960 611 aaKnown RBP9.73□□□□□ -0.85
DDB1-202ENST00000414411 THRAP10827 490 aa9.73□□□□□ -0.85
DDB1-202ENST00000414411 PKMP14618 531 aaKnown RBP9.73□□□□□ -0.85
DDB1-202ENST00000414411 CD9P21926 228 aa9.73□□□□□ -0.85
DDB1-202ENST00000414411 KELP23276 732 aa9.73□□□□□ -0.85
DDB1-202ENST00000414411 HTR1BP28222 390 aa9.73□□□□□ -0.85
DDB1-202ENST00000414411 ADSLP30566 484 aaPredicted RBP9.73□□□□□ -0.85
DDB1-202ENST00000414411 AKT1P31749 480 aa9.73□□□□□ -0.85
DDB1-202ENST00000414411 HOXD12P35452 270 aa9.73□□□□□ -0.85
DDB1-202ENST00000414411 THOP1P52888 689 aa9.73□□□□□ -0.85
DDB1-202ENST00000414411 ILF2Q12905 390 aaKnown RBP9.73□□□□□ -0.85
DDB1-202ENST00000414411 PTK2BQ14289 1009 aa9.73□□□□□ -0.85
DDB1-202ENST00000414411 PDCD2Q16342 344 aaPredicted RBP9.73□□□□□ -0.85
DDB1-202ENST00000414411 BCL7AQ4VC05 210 aa9.73□□□□□ -0.85
DDB1-202ENST00000414411 HECTD2Q5U5R9 776 aa9.73□□□□□ -0.85
DDB1-202ENST00000414411 KLC3Q6P597 504 aa9.73□□□□□ -0.85
DDB1-202ENST00000414411 ZC3H14Q6PJT7 736 aaKnown RBP9.73□□□□□ -0.85
DDB1-202ENST00000414411 TMEM220Q6QAJ8 160 aa9.73□□□□□ -0.85
DDB1-202ENST00000414411 LAYNQ6UX15 382 aa9.73□□□□□ -0.85
DDB1-202ENST00000414411 KBTBD2Q8IY47 623 aa9.73□□□□□ -0.85
DDB1-202ENST00000414411 OR56A4Q8NGH8 313 aa9.73□□□□□ -0.85
DDB1-202ENST00000414411 FAM136AQ96C01 138 aa9.73□□□□□ -0.85
DDB1-202ENST00000414411 CCDC124Q96CT7 223 aaKnown RBP9.73□□□□□ -0.85
DDB1-202ENST00000414411 CCDC126Q96EE4 140 aa9.73□□□□□ -0.85
DDB1-202ENST00000414411 MAELQ96JY0 434 aaKnown RBP9.73□□□□□ -0.85
DDB1-202ENST00000414411 ZNF514Q96K75 400 aaPredicted RBP9.73□□□□□ -0.85
DDB1-202ENST00000414411 UBXN10Q96LJ8 280 aa9.73□□□□□ -0.85
DDB1-202ENST00000414411 WDR92Q96MX6 357 aa9.73□□□□□ -0.85
DDB1-202ENST00000414411 ZCCHC2Q9C0B9 1178 aaKnown RBP9.73□□□□□ -0.85
DDB1-202ENST00000414411 RMI1Q9H9A7 625 aa9.73□□□□□ -0.85
DDB1-202ENST00000414411 GEMIN8Q9NWZ8 242 aaKnown RBP9.73□□□□□ -0.85
DDB1-202ENST00000414411 GULP1Q9UBP9 304 aa9.73□□□□□ -0.85
DDB1-202ENST00000414411 SUSD2Q9UGT4 822 aa9.73□□□□□ -0.85
DDB1-202ENST00000414411 CORO1CQ9ULV4 474 aaPredicted RBP9.73□□□□□ -0.85
DDB1-202ENST00000414411 VWA7Q9Y334 891 aa9.73□□□□□ -0.85
DDB1-202ENST00000414411 PCDHB1Q9Y5F3 818 aa9.73□□□□□ -0.85
DDB1-202ENST00000414411 EP300Q09472 2414 aaPredicted RBP9.73□□□□□ -0.85
DDB1-202ENST00000414411 UBA6A0AVT1 1052 aaPredicted RBP9.72□□□□□ -0.85
DDB1-202ENST00000414411 A8MT66 165 aa9.72□□□□□ -0.85
DDB1-202ENST00000414411 TMEM233B4DJY2 109 aa9.72□□□□□ -0.85
DDB1-202ENST00000414411 SORBS2O94875 1100 aaKnown RBP9.72□□□□□ -0.85
DDB1-202ENST00000414411 CCDC166P0CW27 439 aa9.72□□□□□ -0.85
DDB1-202ENST00000414411 GNSP15586 552 aa9.72□□□□□ -0.85
DDB1-202ENST00000414411 CD1EP15812 388 aa9.72□□□□□ -0.85
DDB1-202ENST00000414411 PRLHRP49683 370 aa9.72□□□□□ -0.85
DDB1-202ENST00000414411 MTTPP55157 894 aa9.72□□□□□ -0.85
DDB1-202ENST00000414411 NXPH1P58417 271 aa9.72□□□□□ -0.85
DDB1-202ENST00000414411 BNC1Q01954 994 aa9.72□□□□□ -0.85
DDB1-202ENST00000414411 EIF2B5Q13144 721 aaKnown RBP9.72□□□□□ -0.85
DDB1-202ENST00000414411 CCNIQ14094 377 aa9.72□□□□□ -0.85
DDB1-202ENST00000414411 ZNF658BQ4V348 819 aaPredicted RBP9.72□□□□□ -0.85
DDB1-202ENST00000414411 PYCR3Q53H96 274 aa9.72□□□□□ -0.85
DDB1-202ENST00000414411 SH2D4BQ5SQS7 431 aa9.72□□□□□ -0.85
DDB1-202ENST00000414411 TMEM198Q66K66 360 aa9.72□□□□□ -0.85
DDB1-202ENST00000414411 DOK6Q6PKX4 331 aa9.72□□□□□ -0.85
DDB1-202ENST00000414411 ENPP7Q6UWV6 458 aa9.72□□□□□ -0.85
DDB1-202ENST00000414411 PRR23BQ6ZRT6 265 aa9.72□□□□□ -0.85
DDB1-202ENST00000414411 DET1Q7L5Y6 550 aa9.72□□□□□ -0.85
DDB1-202ENST00000414411 SNX32Q86XE0 403 aa9.72□□□□□ -0.85
DDB1-202ENST00000414411 HPS6Q86YV9 775 aa9.72□□□□□ -0.85
DDB1-202ENST00000414411 FBXW8Q8N3Y1 598 aa9.72□□□□□ -0.85
DDB1-202ENST00000414411 RP9Q8TA86 221 aaKnown RBP9.72□□□□□ -0.85
DDB1-202ENST00000414411 OR1E3Q8WZA6 343 aa9.72□□□□□ -0.85
DDB1-202ENST00000414411 PIGKQ92643 395 aa9.72□□□□□ -0.85
DDB1-202ENST00000414411 LINC00615Q96LM1 132 aaPredicted RBP9.72□□□□□ -0.85
DDB1-202ENST00000414411 ZNF184Q99676 751 aaPredicted RBP9.72□□□□□ -0.85
DDB1-202ENST00000414411 AARSD1Q9BTE6 412 aaKnown RBP9.72□□□□□ -0.85
DDB1-202ENST00000414411 S100A14Q9HCY8 104 aa9.72□□□□□ -0.85
DDB1-202ENST00000414411 MRPL40Q9NQ50 206 aaKnown RBP9.72□□□□□ -0.85
DDB1-202ENST00000414411 LATS2Q9NRM7 1088 aa9.72□□□□□ -0.85
DDB1-202ENST00000414411 KLF15Q9UIH9 416 aa9.72□□□□□ -0.85
DDB1-202ENST00000414411 POMPQ9Y244 141 aa9.72□□□□□ -0.85
DDB1-202ENST00000414411 DGKBQ9Y6T7 804 aa9.72□□□□□ -0.85
DDB1-202ENST00000414411 ZFC3H1O60293 1989 aaKnown RBP9.72□□□□□ -0.85
DDB1-202ENST00000414411 ARHGEF17Q96PE2 2063 aaPredicted RBP9.72□□□□□ -0.85
DDB1-202ENST00000414411 PRSS38A1L453 326 aa9.72□□□□□ -0.85
DDB1-202ENST00000414411 OR2AG2A6NM03 316 aa9.72□□□□□ -0.85
DDB1-202ENST00000414411 TRPC5OSA6NMA1 111 aa9.72□□□□□ -0.85
DDB1-202ENST00000414411 IQCF5A8MTL0 148 aa9.72□□□□□ -0.85
DDB1-202ENST00000414411 H3BMM5 538 aa9.72□□□□□ -0.85
DDB1-202ENST00000414411 SMNDC1O75940 238 aaKnown RBP eCLIP9.72□□□□□ -0.85
DDB1-202ENST00000414411 IPO13O94829 963 aaKnown RBP9.72□□□□□ -0.85
DDB1-202ENST00000414411 RBP1P09455 135 aa9.72□□□□□ -0.85
DDB1-202ENST00000414411 SLC26A3P40879 764 aa9.72□□□□□ -0.85
DDB1-202ENST00000414411 DPP6P42658 865 aa9.72□□□□□ -0.85
DDB1-202ENST00000414411 NUDT2P50583 147 aa9.72□□□□□ -0.85
DDB1-202ENST00000414411 CDKN2DP55273 166 aa9.72□□□□□ -0.85
DDB1-202ENST00000414411 SRP54P61011 504 aaKnown RBP9.72□□□□□ -0.85
DDB1-202ENST00000414411 HERC3Q15034 1050 aa9.72□□□□□ -0.85
DDB1-202ENST00000414411 ACAP2Q15057 778 aa9.72□□□□□ -0.85
DDB1-202ENST00000414411 LPAL2Q16609 132 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms