RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 UNC5BQ8IZJ1 945 aa14.25□□□□□ -0.13
CHD1-202ENST00000414220 D2HGDHQ8N465 521 aa14.25□□□□□ -0.13
CHD1-202ENST00000414220 MMGT1Q8N4V1 131 aa14.25□□□□□ -0.13
CHD1-202ENST00000414220 IL22RA1Q8N6P7 574 aa14.25□□□□□ -0.13
CHD1-202ENST00000414220 ZSCAN1Q8NBB4 408 aa14.25□□□□□ -0.13
CHD1-202ENST00000414220 OR8K5Q8NH50 307 aa14.25□□□□□ -0.13
CHD1-202ENST00000414220 FAM45AQ8TCE6 357 aa14.25□□□□□ -0.13
CHD1-202ENST00000414220 GPR21Q99679 349 aa14.25□□□□□ -0.13
CHD1-202ENST00000414220 CTRCQ99895 268 aa14.25□□□□□ -0.13
CHD1-202ENST00000414220 LRRC1Q9BTT6 524 aa14.25□□□□□ -0.13
CHD1-202ENST00000414220 FOXJ2Q9P0K8 574 aa14.25□□□□□ -0.13
CHD1-202ENST00000414220 SPATA7Q9P0W8 599 aa14.25□□□□□ -0.13
CHD1-202ENST00000414220 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.25□□□□□ -0.13
CHD1-202ENST00000414220 URB1O60287 2271 aaKnown RBP14.24□□□□□ -0.13
CHD1-202ENST00000414220 SLC9B1P1A6NJY1 282 aa14.24□□□□□ -0.13
CHD1-202ENST00000414220 SPAG6O75602 509 aa14.24□□□□□ -0.13
CHD1-202ENST00000414220 FKBP9O95302 570 aa14.24□□□□□ -0.13
CHD1-202ENST00000414220 MATN4O95460 622 aa14.24□□□□□ -0.13
CHD1-202ENST00000414220 C1orf105O95561 183 aa14.24□□□□□ -0.13
CHD1-202ENST00000414220 AHSGP02765 367 aa14.24□□□□□ -0.13
CHD1-202ENST00000414220 CCNYL3P0C7X3 344 aa14.24□□□□□ -0.13
CHD1-202ENST00000414220 CD9P21926 228 aa14.24□□□□□ -0.13
CHD1-202ENST00000414220 PPP1CAP62136 330 aa14.24□□□□□ -0.13
CHD1-202ENST00000414220 SLC7A5Q01650 507 aa14.24□□□□□ -0.13
CHD1-202ENST00000414220 GUCY2DQ02846 1103 aa14.24□□□□□ -0.13
CHD1-202ENST00000414220 GBX1Q14549 363 aa14.24□□□□□ -0.13
CHD1-202ENST00000414220 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.24□□□□□ -0.13
CHD1-202ENST00000414220 ACSBG2Q5FVE4 666 aa14.24□□□□□ -0.13
CHD1-202ENST00000414220 ZNF549Q6P9A3 640 aa14.24□□□□□ -0.13
CHD1-202ENST00000414220 SPESP1Q6UW49 350 aa14.24□□□□□ -0.13
CHD1-202ENST00000414220 C3orf62Q6ZUJ4 267 aa14.24□□□□□ -0.13
CHD1-202ENST00000414220 ZFAND4Q86XD8 727 aa14.24□□□□□ -0.13
CHD1-202ENST00000414220 GPATCH11Q8N954 259 aa14.24□□□□□ -0.13
CHD1-202ENST00000414220 OR2L8Q8NGY9 312 aa14.24□□□□□ -0.13
CHD1-202ENST00000414220 CCNL2Q96S94 520 aaPredicted RBP14.24□□□□□ -0.13
CHD1-202ENST00000414220 EFHD1Q9BUP0 239 aa14.24□□□□□ -0.13
CHD1-202ENST00000414220 SIDT1Q9NXL6 827 aaKnown RBP14.24□□□□□ -0.13
CHD1-202ENST00000414220 GRHL1Q9NZI5 618 aa14.24□□□□□ -0.13
CHD1-202ENST00000414220 PLAGL1Q9UM63 463 aa14.24□□□□□ -0.13
CHD1-202ENST00000414220 BTRCQ9Y297 605 aa14.24□□□□□ -0.13
CHD1-202ENST00000414220 VWA7Q9Y334 891 aa14.24□□□□□ -0.13
CHD1-202ENST00000414220 PIKFYVEQ9Y2I7 2098 aa14.24□□□□□ -0.13
CHD1-202ENST00000414220 AKAP13Q12802 2813 aa14.23□□□□□ -0.13
CHD1-202ENST00000414220 A0A0J9YY10 115 aa14.23□□□□□ -0.13
CHD1-202ENST00000414220 TP73O15350 636 aa14.23□□□□□ -0.13
CHD1-202ENST00000414220 RAD1O60671 282 aa14.23□□□□□ -0.13
CHD1-202ENST00000414220 STK17BO94768 372 aa14.23□□□□□ -0.13
CHD1-202ENST00000414220 FGF5P12034 268 aa14.23□□□□□ -0.13
CHD1-202ENST00000414220 UGT2B7P16662 529 aa14.23□□□□□ -0.13
CHD1-202ENST00000414220 PKLRP30613 574 aa14.23□□□□□ -0.13
CHD1-202ENST00000414220 SLC12A2P55011 1212 aa14.23□□□□□ -0.13
CHD1-202ENST00000414220 TUBB4BP68371 445 aa14.23□□□□□ -0.13
CHD1-202ENST00000414220 SH3BP2P78314 561 aa14.23□□□□□ -0.13
CHD1-202ENST00000414220 TLE3Q04726 772 aa14.23□□□□□ -0.13
CHD1-202ENST00000414220 CLN3Q13286 438 aa14.23□□□□□ -0.13
CHD1-202ENST00000414220 NAA25Q14CX7 972 aa14.23□□□□□ -0.13
CHD1-202ENST00000414220 SF1Q15637 639 aaKnown RBP14.23□□□□□ -0.13
CHD1-202ENST00000414220 SLC5A12Q1EHB4 618 aa14.23□□□□□ -0.13
CHD1-202ENST00000414220 TRMT10BQ6PF06 316 aaKnown RBP14.23□□□□□ -0.13
CHD1-202ENST00000414220 C19orf48Q6RUI8 117 aa14.23□□□□□ -0.13
CHD1-202ENST00000414220 CCDC81Q6ZN84 652 aa14.23□□□□□ -0.13
CHD1-202ENST00000414220 CYS1Q717R9 158 aa14.23□□□□□ -0.13
CHD1-202ENST00000414220 STRA8Q7Z7C7 330 aa14.23□□□□□ -0.13
CHD1-202ENST00000414220 NLGN4XQ8N0W4 816 aa14.23□□□□□ -0.13
CHD1-202ENST00000414220 MYO1HQ8N1T3 1032 aa14.23□□□□□ -0.13
CHD1-202ENST00000414220 ESX1Q8N693 406 aa14.23□□□□□ -0.13
CHD1-202ENST00000414220 NLGN4YQ8NFZ3 816 aaPredicted RBP14.23□□□□□ -0.13
CHD1-202ENST00000414220 OR9A1PQ8NGU1 263 aa14.23□□□□□ -0.13
CHD1-202ENST00000414220 FBXO25Q8TCJ0 367 aa14.23□□□□□ -0.13
CHD1-202ENST00000414220 KIAA1143Q96AT1 154 aaPredicted RBP14.23□□□□□ -0.13
CHD1-202ENST00000414220 TCTN2Q96GX1 697 aa14.23□□□□□ -0.13
CHD1-202ENST00000414220 VPS39Q96JC1 886 aa14.23□□□□□ -0.13
CHD1-202ENST00000414220 NDNQ99608 321 aa14.23□□□□□ -0.13
CHD1-202ENST00000414220 PITPNM3Q9BZ71 974 aa14.23□□□□□ -0.13
CHD1-202ENST00000414220 ULBP3Q9BZM4 244 aa14.23□□□□□ -0.13
CHD1-202ENST00000414220 SLC7A5P2Q9GIP4 190 aa14.23□□□□□ -0.13
CHD1-202ENST00000414220 FGF21Q9NSA1 209 aa14.23□□□□□ -0.13
CHD1-202ENST00000414220 MOCS1Q9NZB8 636 aa14.23□□□□□ -0.13
CHD1-202ENST00000414220 TSR3Q9UJK0 312 aaKnown RBP14.23□□□□□ -0.13
CHD1-202ENST00000414220 SERTAD3Q9UJW9 196 aa14.23□□□□□ -0.13
CHD1-202ENST00000414220 NFS1Q9Y697 457 aa14.23□□□□□ -0.13
CHD1-202ENST00000414220 PSIP1O75475 530 aaKnown RBP14.22□□□□□ -0.13
CHD1-202ENST00000414220 HIST1H2AGP0C0S8 130 aaPredicted RBP14.22□□□□□ -0.13
CHD1-202ENST00000414220 EBLN1P0CF75 366 aa14.22□□□□□ -0.13
CHD1-202ENST00000414220 HIST1H2ADP20671 130 aa14.22□□□□□ -0.13
CHD1-202ENST00000414220 CYP2A7P20853 494 aa14.22□□□□□ -0.13
CHD1-202ENST00000414220 ITPKBP27987 946 aa14.22□□□□□ -0.13
CHD1-202ENST00000414220 STX2P32856 288 aa14.22□□□□□ -0.13
CHD1-202ENST00000414220 MAGEA4P43358 317 aa14.22□□□□□ -0.13
CHD1-202ENST00000414220 BDKRB1P46663 353 aa14.22□□□□□ -0.13
CHD1-202ENST00000414220 IL2P60568 153 aa14.22□□□□□ -0.13
CHD1-202ENST00000414220 MAP7Q14244 749 aa14.22□□□□□ -0.13
CHD1-202ENST00000414220 ARHGAP19Q14CB8 494 aa14.22□□□□□ -0.13
CHD1-202ENST00000414220 FASTKD3Q14CZ7 662 aaKnown RBP14.22□□□□□ -0.13
CHD1-202ENST00000414220 COL28A1Q2UY09 1125 aa14.22□□□□□ -0.13
CHD1-202ENST00000414220 HECTD2Q5U5R9 776 aa14.22□□□□□ -0.13
CHD1-202ENST00000414220 CAPN12Q6ZSI9 719 aa14.22□□□□□ -0.13
CHD1-202ENST00000414220 DTX1Q86Y01 620 aa14.22□□□□□ -0.13
CHD1-202ENST00000414220 CPNE9Q8IYJ1 553 aa14.22□□□□□ -0.13
CHD1-202ENST00000414220 GPR135Q8IZ08 494 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms