RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 PTPRSQ13332 1948 aa9.2□□□□□ -0.94
SNHG3-201ENST00000413987 TMEM191CA6NGB0 347 aa9.2□□□□□ -0.94
SNHG3-201ENST00000413987 H3BNH8 94 aa9.2□□□□□ -0.94
SNHG3-201ENST00000413987 GRAP2O75791 330 aa9.2□□□□□ -0.94
SNHG3-201ENST00000413987 GABBR2O75899 941 aa9.2□□□□□ -0.94
SNHG3-201ENST00000413987 AKR7A3O95154 331 aa9.2□□□□□ -0.94
SNHG3-201ENST00000413987 NDST3O95803 873 aa9.2□□□□□ -0.94
SNHG3-201ENST00000413987 IL2RAP01589 272 aa9.2□□□□□ -0.94
SNHG3-201ENST00000413987 CALB1P05937 261 aa9.2□□□□□ -0.94
SNHG3-201ENST00000413987 PRKCHP24723 683 aa9.2□□□□□ -0.94
SNHG3-201ENST00000413987 GPD2P43304 727 aa9.2□□□□□ -0.94
SNHG3-201ENST00000413987 GABRB2P47870 512 aa9.2□□□□□ -0.94
SNHG3-201ENST00000413987 SLC1A6P48664 564 aa9.2□□□□□ -0.94
SNHG3-201ENST00000413987 CCR3P51677 355 aa9.2□□□□□ -0.94
SNHG3-201ENST00000413987 C21orf59P57076 290 aa9.2□□□□□ -0.94
SNHG3-201ENST00000413987 SMAD3P84022 425 aaKnown RBP9.2□□□□□ -0.94
SNHG3-201ENST00000413987 FLOT2Q14254 428 aa9.2□□□□□ -0.94
SNHG3-201ENST00000413987 SEC23BQ15437 767 aa9.2□□□□□ -0.94
SNHG3-201ENST00000413987 MAPRE2Q15555 327 aa9.2□□□□□ -0.94
SNHG3-201ENST00000413987 ZBED5Q49AG3 693 aa9.2□□□□□ -0.94
SNHG3-201ENST00000413987 RNFT1Q5M7Z0 435 aa9.2□□□□□ -0.94
SNHG3-201ENST00000413987 PLEKHS1Q5SXH7 462 aa9.2□□□□□ -0.94
SNHG3-201ENST00000413987 THOC7Q6I9Y2 204 aaKnown RBP9.2□□□□□ -0.94
SNHG3-201ENST00000413987 TIFABQ6ZNK6 161 aa9.2□□□□□ -0.94
SNHG3-201ENST00000413987 BEND4Q6ZU67 534 aa9.2□□□□□ -0.94
SNHG3-201ENST00000413987 SPRED2Q7Z698 418 aa9.2□□□□□ -0.94
SNHG3-201ENST00000413987 CHERPQ8IWX8 916 aaKnown RBP9.2□□□□□ -0.94
SNHG3-201ENST00000413987 SLC43A2Q8N370 569 aa9.2□□□□□ -0.94
SNHG3-201ENST00000413987 TOP6BLQ8N6T0 577 aa9.2□□□□□ -0.94
SNHG3-201ENST00000413987 OR6S1Q8NH40 331 aa9.2□□□□□ -0.94
SNHG3-201ENST00000413987 ACTL9Q8TC94 416 aa9.2□□□□□ -0.94
SNHG3-201ENST00000413987 CLEC4CQ8WTT0 213 aa9.2□□□□□ -0.94
SNHG3-201ENST00000413987 TFB1MQ8WVM0 346 aaKnown RBP9.2□□□□□ -0.94
SNHG3-201ENST00000413987 RANBP9Q96S59 729 aa9.2□□□□□ -0.94
SNHG3-201ENST00000413987 CGREF1Q99674 301 aa9.2□□□□□ -0.94
SNHG3-201ENST00000413987 ZNF395Q9H8N7 513 aaPredicted RBP9.2□□□□□ -0.94
SNHG3-201ENST00000413987 UCK1Q9HA47 277 aa9.2□□□□□ -0.94
SNHG3-201ENST00000413987 SMPD3Q9NY59 655 aaPredicted RBP9.2□□□□□ -0.94
SNHG3-201ENST00000413987 CD300AQ9UGN4 299 aa9.2□□□□□ -0.94
SNHG3-201ENST00000413987 VWA8A3KMH1 1905 aa9.2□□□□□ -0.94
SNHG3-201ENST00000413987 CHADO15335 359 aa9.2□□□□□ -0.94
SNHG3-201ENST00000413987 INPPL1O15357 1258 aa9.2□□□□□ -0.94
SNHG3-201ENST00000413987 TADA2AO75478 443 aa9.2□□□□□ -0.94
SNHG3-201ENST00000413987 CRTAPO75718 401 aaPredicted RBP9.2□□□□□ -0.94
SNHG3-201ENST00000413987 SORBS2O94875 1100 aaKnown RBP9.2□□□□□ -0.94
SNHG3-201ENST00000413987 F9P00740 461 aa9.2□□□□□ -0.94
SNHG3-201ENST00000413987 SERPINE1P05121 402 aa9.2□□□□□ -0.94
SNHG3-201ENST00000413987 NCF2P19878 526 aaPredicted RBP9.2□□□□□ -0.94
SNHG3-201ENST00000413987 MMP8P22894 467 aa9.2□□□□□ -0.94
SNHG3-201ENST00000413987 TRIM23P36406 574 aa9.2□□□□□ -0.94
SNHG3-201ENST00000413987 MAP2K6P52564 334 aa9.2□□□□□ -0.94
SNHG3-201ENST00000413987 PTSQ03393 145 aa9.2□□□□□ -0.94
SNHG3-201ENST00000413987 DPYSL3Q14195 570 aa9.2□□□□□ -0.94
SNHG3-201ENST00000413987 CYTH1Q15438 398 aa9.2□□□□□ -0.94
SNHG3-201ENST00000413987 FASTKD1Q53R41 847 aaKnown RBP9.2□□□□□ -0.94
SNHG3-201ENST00000413987 FAM69AQ5T7M9 428 aa9.2□□□□□ -0.94
SNHG3-201ENST00000413987 ARHGAP17Q68EM7 881 aa9.2□□□□□ -0.94
SNHG3-201ENST00000413987 FRMD7Q6ZUT3 714 aa9.2□□□□□ -0.94
SNHG3-201ENST00000413987 PAQR9Q6ZVX9 377 aa9.2□□□□□ -0.94
SNHG3-201ENST00000413987 SETD3Q86TU7 594 aaPredicted RBP9.2□□□□□ -0.94
SNHG3-201ENST00000413987 GPR180Q86V85 440 aa9.2□□□□□ -0.94
SNHG3-201ENST00000413987 CCDC117Q8IWD4 279 aaPredicted RBP9.2□□□□□ -0.94
SNHG3-201ENST00000413987 SCUBE3Q8IX30 993 aa9.2□□□□□ -0.94
SNHG3-201ENST00000413987 EMC1Q8N766 993 aa9.2□□□□□ -0.94
SNHG3-201ENST00000413987 CLHC1Q8NHS4 586 aa9.2□□□□□ -0.94
SNHG3-201ENST00000413987 ZNF420Q8TAQ5 688 aaPredicted RBP9.2□□□□□ -0.94
SNHG3-201ENST00000413987 CHPT1Q8WUD6 406 aa9.2□□□□□ -0.94
SNHG3-201ENST00000413987 EME1Q96AY2 570 aa9.2□□□□□ -0.94
SNHG3-201ENST00000413987 RMND5BQ96G75 393 aaPredicted RBP9.2□□□□□ -0.94
SNHG3-201ENST00000413987 PCED1BQ96HM7 432 aa9.2□□□□□ -0.94
SNHG3-201ENST00000413987 C20orf27Q9GZN8 174 aa9.2□□□□□ -0.94
SNHG3-201ENST00000413987 TMPRSS4Q9NRS4 437 aa9.2□□□□□ -0.94
SNHG3-201ENST00000413987 CENPMQ9NSP4 180 aa9.2□□□□□ -0.94
SNHG3-201ENST00000413987 ABCB8Q9NUT2 735 aa9.2□□□□□ -0.94
SNHG3-201ENST00000413987 AP4S1Q9Y587 144 aa9.2□□□□□ -0.94
SNHG3-201ENST00000413987 LTBP2Q14767 1821 aa9.19□□□□□ -0.94
SNHG3-201ENST00000413987 A0A087WXM4 84 aa9.19□□□□□ -0.94
SNHG3-201ENST00000413987 PRSS51A0A1B0GVH4 220 aa9.19□□□□□ -0.94
SNHG3-201ENST00000413987 HEATR9A2RTY3 570 aa9.19□□□□□ -0.94
SNHG3-201ENST00000413987 GSAPA4D1B5 854 aa9.19□□□□□ -0.94
SNHG3-201ENST00000413987 CCDC154A6NI56 674 aa9.19□□□□□ -0.94
SNHG3-201ENST00000413987 LILRB5O75023 590 aa9.19□□□□□ -0.94
SNHG3-201ENST00000413987 UBL4AP11441 157 aa9.19□□□□□ -0.94
SNHG3-201ENST00000413987 ODC1P11926 461 aa9.19□□□□□ -0.94
SNHG3-201ENST00000413987 PTPN1P18031 435 aaKnown RBP9.19□□□□□ -0.94
SNHG3-201ENST00000413987 WARSP23381 471 aaKnown RBP9.19□□□□□ -0.94
SNHG3-201ENST00000413987 PTPN3P26045 913 aa9.19□□□□□ -0.94
SNHG3-201ENST00000413987 SLC7A1P30825 629 aa9.19□□□□□ -0.94
SNHG3-201ENST00000413987 HOXA6P31267 233 aa9.19□□□□□ -0.94
SNHG3-201ENST00000413987 ARPP19P56211 112 aa9.19□□□□□ -0.94
SNHG3-201ENST00000413987 CDKL1Q00532 357 aa9.19□□□□□ -0.94
SNHG3-201ENST00000413987 PRSS53Q2L4Q9 553 aa9.19□□□□□ -0.94
SNHG3-201ENST00000413987 RTP2Q5QGT7 225 aa9.19□□□□□ -0.94
SNHG3-201ENST00000413987 SPOUT1Q5T280 376 aaKnown RBP9.19□□□□□ -0.94
SNHG3-201ENST00000413987 TEDDM1Q5T9Z0 273 aa9.19□□□□□ -0.94
SNHG3-201ENST00000413987 FAM171A1Q5VUB5 890 aa9.19□□□□□ -0.94
SNHG3-201ENST00000413987 MBLAC2Q68D91 279 aa9.19□□□□□ -0.94
SNHG3-201ENST00000413987 DSG4Q86SJ6 1040 aa9.19□□□□□ -0.94
SNHG3-201ENST00000413987 IGDCC3Q8IVU1 814 aa9.19□□□□□ -0.94
SNHG3-201ENST00000413987 GALNT4Q8N4A0 578 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms