RNA–Protein interactions for RNA: ENST00000413141.5

VPS41-204, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-204ENST00000413141 NUF2Q9BZD4 464 aa6.47□□□□□ -1.37
VPS41-204ENST00000413141 SLC32A1Q9H598 525 aa6.47□□□□□ -1.37
VPS41-204ENST00000413141 NOL11Q9H8H0 719 aaKnown RBP6.47□□□□□ -1.37
VPS41-204ENST00000413141 AASDHPPTQ9NRN7 309 aa6.47□□□□□ -1.37
VPS41-204ENST00000413141 ABCF3Q9NUQ8 709 aa6.47□□□□□ -1.37
VPS41-204ENST00000413141 TRNAU1APQ9NX07 287 aaKnown RBP6.47□□□□□ -1.37
VPS41-204ENST00000413141 VTI1BQ9UEU0 232 aa6.47□□□□□ -1.37
VPS41-204ENST00000413141 CIDEBQ9UHD4 219 aa6.47□□□□□ -1.37
VPS41-204ENST00000413141 ZNF225Q9UK10 706 aa6.47□□□□□ -1.37
VPS41-204ENST00000413141 ASF1AQ9Y294 204 aa6.47□□□□□ -1.37
VPS41-204ENST00000413141 WDR37Q9Y2I8 494 aa6.47□□□□□ -1.37
VPS41-204ENST00000413141 FIS1Q9Y3D6 152 aa6.47□□□□□ -1.37
VPS41-204ENST00000413141 TRAF6Q9Y4K3 522 aa6.47□□□□□ -1.37
VPS41-204ENST00000413141 CFAP20Q9Y6A4 193 aaKnown RBP6.47□□□□□ -1.37
VPS41-204ENST00000413141 DGKBQ9Y6T7 804 aa6.47□□□□□ -1.37
VPS41-204ENST00000413141 ATXN2Q99700 1313 aaKnown RBP6.47□□□□□ -1.37
VPS41-204ENST00000413141 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.46□□□□□ -1.38
VPS41-204ENST00000413141 A6NCN8 305 aa6.46□□□□□ -1.38
VPS41-204ENST00000413141 TMEM221A6NGB7 291 aa6.46□□□□□ -1.38
VPS41-204ENST00000413141 TRPC5OSA6NMA1 111 aa6.46□□□□□ -1.38
VPS41-204ENST00000413141 PDZK1P1A8MUH7 402 aa6.46□□□□□ -1.38
VPS41-204ENST00000413141 M0R296 226 aa6.46□□□□□ -1.38
VPS41-204ENST00000413141 GIPC1O14908 333 aa6.46□□□□□ -1.38
VPS41-204ENST00000413141 AZIN1O14977 448 aa6.46□□□□□ -1.38
VPS41-204ENST00000413141 LAMTOR5O43504 91 aa6.46□□□□□ -1.38
VPS41-204ENST00000413141 DIAPH2O60879 1101 aa6.46□□□□□ -1.38
VPS41-204ENST00000413141 TECTAO75443 2155 aa6.46□□□□□ -1.38
VPS41-204ENST00000413141 KATNA1O75449 491 aa6.46□□□□□ -1.38
VPS41-204ENST00000413141 OR4F21O95013 312 aa6.46□□□□□ -1.38
VPS41-204ENST00000413141 RASGRP1O95267 797 aa6.46□□□□□ -1.38
VPS41-204ENST00000413141 WNT1P04628 370 aa6.46□□□□□ -1.38
VPS41-204ENST00000413141 ENO1P06733 434 aaKnown RBP6.46□□□□□ -1.38
VPS41-204ENST00000413141 FGF4P08620 206 aa6.46□□□□□ -1.38
VPS41-204ENST00000413141 ERGP11308 486 aa6.46□□□□□ -1.38
VPS41-204ENST00000413141 MTHFD1P11586 935 aaKnown RBP6.46□□□□□ -1.38
VPS41-204ENST00000413141 EPB42P16452 691 aa6.46□□□□□ -1.38
VPS41-204ENST00000413141 EPORP19235 508 aa6.46□□□□□ -1.38
VPS41-204ENST00000413141 ITPKAP23677 461 aa6.46□□□□□ -1.38
VPS41-204ENST00000413141 AK4P27144 223 aaPredicted RBP6.46□□□□□ -1.38
VPS41-204ENST00000413141 CD38P28907 300 aa6.46□□□□□ -1.38
VPS41-204ENST00000413141 SERPINB3P29508 390 aa6.46□□□□□ -1.38
VPS41-204ENST00000413141 ARL1P40616 181 aaPredicted RBP6.46□□□□□ -1.38
VPS41-204ENST00000413141 ACTR1BP42025 376 aa6.46□□□□□ -1.38
VPS41-204ENST00000413141 FNTBP49356 437 aa6.46□□□□□ -1.38
VPS41-204ENST00000413141 CCNG1P51959 295 aa6.46□□□□□ -1.38
VPS41-204ENST00000413141 INHBCP55103 352 aa6.46□□□□□ -1.38
VPS41-204ENST00000413141 ERVPABLB-1P60509 514 aa6.46□□□□□ -1.38
VPS41-204ENST00000413141 ACTR1AP61163 376 aa6.46□□□□□ -1.38
VPS41-204ENST00000413141 RACK1P63244 317 aaKnown RBP6.46□□□□□ -1.38
VPS41-204ENST00000413141 BTKQ06187 659 aa6.46□□□□□ -1.38
VPS41-204ENST00000413141 ILF3Q12906 894 aaKnown RBP eCLIP6.46□□□□□ -1.38
VPS41-204ENST00000413141 CLCA4Q14CN2 919 aa6.46□□□□□ -1.38
VPS41-204ENST00000413141 TCEA2Q15560 299 aa6.46□□□□□ -1.38
VPS41-204ENST00000413141 UAP1L1Q3KQV9 507 aa6.46□□□□□ -1.38
VPS41-204ENST00000413141 UGT3A2Q3SY77 523 aa6.46□□□□□ -1.38
VPS41-204ENST00000413141 LETMD1Q6P1Q0 360 aa6.46□□□□□ -1.38
VPS41-204ENST00000413141 LAYNQ6UX15 382 aa6.46□□□□□ -1.38
VPS41-204ENST00000413141 TRPM8Q7Z2W7 1104 aa6.46□□□□□ -1.38
VPS41-204ENST00000413141 RD3Q7Z3Z2 195 aa6.46□□□□□ -1.38
VPS41-204ENST00000413141 IQCHQ86VS3 1027 aa6.46□□□□□ -1.38
VPS41-204ENST00000413141 NRROSQ86YC3 692 aa6.46□□□□□ -1.38
VPS41-204ENST00000413141 DCP2Q8IU60 420 aaKnown RBP6.46□□□□□ -1.38
VPS41-204ENST00000413141 HID1Q8IV36 788 aa6.46□□□□□ -1.38
VPS41-204ENST00000413141 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.46□□□□□ -1.38
VPS41-204ENST00000413141 LRRC56Q8IYG6 542 aaPredicted RBP6.46□□□□□ -1.38
VPS41-204ENST00000413141 TMEFF1Q8IYR6 380 aa6.46□□□□□ -1.38
VPS41-204ENST00000413141 TBC1D21Q8IYX1 336 aa6.46□□□□□ -1.38
VPS41-204ENST00000413141 PHACTR4Q8IZ21 702 aa6.46□□□□□ -1.38
VPS41-204ENST00000413141 RGL4Q8IZJ4 473 aa6.46□□□□□ -1.38
VPS41-204ENST00000413141 CLYBLQ8N0X4 340 aa6.46□□□□□ -1.38
VPS41-204ENST00000413141 DCBLD1Q8N8Z6 715 aa6.46□□□□□ -1.38
VPS41-204ENST00000413141 SNX31Q8N9S9 440 aa6.46□□□□□ -1.38
VPS41-204ENST00000413141 MFSD2AQ8NA29 543 aa6.46□□□□□ -1.38
VPS41-204ENST00000413141 PPFIBP2Q8ND30 876 aa6.46□□□□□ -1.38
VPS41-204ENST00000413141 OR4F6Q8NGB9 312 aa6.46□□□□□ -1.38
VPS41-204ENST00000413141 OR9A1PQ8NGU1 263 aa6.46□□□□□ -1.38
VPS41-204ENST00000413141 CCL4L1Q8NHW4 92 aa6.46□□□□□ -1.38
VPS41-204ENST00000413141 ZNF480Q8WV37 535 aa6.46□□□□□ -1.38
VPS41-204ENST00000413141 TWIST2Q8WVJ9 160 aa6.46□□□□□ -1.38
VPS41-204ENST00000413141 TFGQ92734 400 aaPredicted RBP6.46□□□□□ -1.38
VPS41-204ENST00000413141 RAD51AP1Q96B01 352 aa6.46□□□□□ -1.38
VPS41-204ENST00000413141 PYCR2Q96C36 320 aa6.46□□□□□ -1.38
VPS41-204ENST00000413141 ERP27Q96DN0 273 aa6.46□□□□□ -1.38
VPS41-204ENST00000413141 C19orf60Q96EN9 201 aa6.46□□□□□ -1.38
VPS41-204ENST00000413141 MED8Q96G25 268 aa6.46□□□□□ -1.38
VPS41-204ENST00000413141 KLHDC7BQ96G42 594 aa6.46□□□□□ -1.38
VPS41-204ENST00000413141 MAELQ96JY0 434 aaKnown RBP6.46□□□□□ -1.38
VPS41-204ENST00000413141 PPP1R36Q96LQ0 422 aa6.46□□□□□ -1.38
VPS41-204ENST00000413141 C12orf66Q96MD2 445 aa6.46□□□□□ -1.38
VPS41-204ENST00000413141 CDK15Q96Q40 435 aa6.46□□□□□ -1.38
VPS41-204ENST00000413141 INSM2Q96T92 566 aaPredicted RBP6.46□□□□□ -1.38
VPS41-204ENST00000413141 MENTQ9BUN1 341 aa6.46□□□□□ -1.38
VPS41-204ENST00000413141 TMEM168Q9H0V1 697 aa6.46□□□□□ -1.38
VPS41-204ENST00000413141 ATG10Q9H0Y0 220 aa6.46□□□□□ -1.38
VPS41-204ENST00000413141 DUSP15Q9H1R2 295 aaPredicted RBP6.46□□□□□ -1.38
VPS41-204ENST00000413141 TRIT1Q9H3H1 467 aaKnown RBP6.46□□□□□ -1.38
VPS41-204ENST00000413141 TCEAL2Q9H3H9 227 aaPredicted RBP6.46□□□□□ -1.38
VPS41-204ENST00000413141 IPPKQ9H8X2 491 aa6.46□□□□□ -1.38
VPS41-204ENST00000413141 MEAF6Q9HAF1 191 aa6.46□□□□□ -1.38
VPS41-204ENST00000413141 TM9SF3Q9HD45 589 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms