RNA–Protein interactions for RNA: ENST00000413023.1

HMGN1P34-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 34, humanhuman

BASIC

Gene HMGN1P34, Length 290 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P34-201ENST00000413023 TPMTP51580 245 aa8.39□□□□□ -1.07
HMGN1P34-201ENST00000413023 CLDN2P57739 230 aa8.39□□□□□ -1.07
HMGN1P34-201ENST00000413023 RPS21P63220 83 aaKnown RBP8.39□□□□□ -1.07
HMGN1P34-201ENST00000413023 MS4A2Q01362 244 aa8.39□□□□□ -1.07
HMGN1P34-201ENST00000413023 PCDH1Q08174 1060 aa8.39□□□□□ -1.07
HMGN1P34-201ENST00000413023 CHIT1Q13231 466 aa8.39□□□□□ -1.07
HMGN1P34-201ENST00000413023 DOC2AQ14183 400 aa8.39□□□□□ -1.07
HMGN1P34-201ENST00000413023 GAS6Q14393 721 aa8.39□□□□□ -1.07
HMGN1P34-201ENST00000413023 KIAA0040Q15053 153 aa8.39□□□□□ -1.07
HMGN1P34-201ENST00000413023 TLR1Q15399 786 aa8.39□□□□□ -1.07
HMGN1P34-201ENST00000413023 ZRSR2Q15696 482 aaKnown RBP8.39□□□□□ -1.07
HMGN1P34-201ENST00000413023 ZNF423Q2M1K9 1284 aa8.39□□□□□ -1.07
HMGN1P34-201ENST00000413023 AP5B1Q2VPB7 878 aa8.39□□□□□ -1.07
HMGN1P34-201ENST00000413023 TTC31Q49AM3 519 aaPredicted RBP8.39□□□□□ -1.07
HMGN1P34-201ENST00000413023 VPS26BQ4G0F5 336 aa8.39□□□□□ -1.07
HMGN1P34-201ENST00000413023 DNAL1Q4LDG9 190 aa8.39□□□□□ -1.07
HMGN1P34-201ENST00000413023 METRNLQ641Q3 311 aa8.39□□□□□ -1.07
HMGN1P34-201ENST00000413023 TBC1D3GQ6DHY5 549 aa8.39□□□□□ -1.07
HMGN1P34-201ENST00000413023 TBC1D3CQ6IPX1 549 aa8.39□□□□□ -1.07
HMGN1P34-201ENST00000413023 ADNP2Q6IQ32 1131 aa8.39□□□□□ -1.07
HMGN1P34-201ENST00000413023 TTC23LQ6PF05 361 aa8.39□□□□□ -1.07
HMGN1P34-201ENST00000413023 BLOC1S3Q6QNY0 202 aa8.39□□□□□ -1.07
HMGN1P34-201ENST00000413023 RNF111Q6ZNA4 994 aa8.39□□□□□ -1.07
HMGN1P34-201ENST00000413023 Q6ZS52 159 aa8.39□□□□□ -1.07
HMGN1P34-201ENST00000413023 LRRC70Q7Z2Q7 622 aa8.39□□□□□ -1.07
HMGN1P34-201ENST00000413023 SPATA19Q7Z5L4 167 aa8.39□□□□□ -1.07
HMGN1P34-201ENST00000413023 THOC6Q86W42 341 aaKnown RBP8.39□□□□□ -1.07
HMGN1P34-201ENST00000413023 HORMAD1Q86X24 394 aa8.39□□□□□ -1.07
HMGN1P34-201ENST00000413023 HPS6Q86YV9 775 aa8.39□□□□□ -1.07
HMGN1P34-201ENST00000413023 RGL4Q8IZJ4 473 aa8.39□□□□□ -1.07
HMGN1P34-201ENST00000413023 TBC1D3Q8IZP1 549 aaPredicted RBP8.39□□□□□ -1.07
HMGN1P34-201ENST00000413023 KIRREL3Q8IZU9 778 aa8.39□□□□□ -1.07
HMGN1P34-201ENST00000413023 FRMD1Q8N878 549 aa8.39□□□□□ -1.07
HMGN1P34-201ENST00000413023 L3MBTL4Q8NA19 623 aa8.39□□□□□ -1.07
HMGN1P34-201ENST00000413023 KYQ8NBH2 561 aa8.39□□□□□ -1.07
HMGN1P34-201ENST00000413023 FBXO15Q8NCQ5 510 aaPredicted RBP8.39□□□□□ -1.07
HMGN1P34-201ENST00000413023 RPLP0P6Q8NHW5 317 aa8.39□□□□□ -1.07
HMGN1P34-201ENST00000413023 PROKR1Q8TCW9 393 aa8.39□□□□□ -1.07
HMGN1P34-201ENST00000413023 ZNF480Q8WV37 535 aa8.39□□□□□ -1.07
HMGN1P34-201ENST00000413023 USP7Q93009 1102 aa8.39□□□□□ -1.07
HMGN1P34-201ENST00000413023 SIPA1Q96FS4 1042 aa8.39□□□□□ -1.07
HMGN1P34-201ENST00000413023 HIST1H2AHQ96KK5 128 aa8.39□□□□□ -1.07
HMGN1P34-201ENST00000413023 CCDC138Q96M89 665 aa8.39□□□□□ -1.07
HMGN1P34-201ENST00000413023 IL17FQ96PD4 163 aa8.39□□□□□ -1.07
HMGN1P34-201ENST00000413023 CDRT15Q96T59 188 aa8.39□□□□□ -1.07
HMGN1P34-201ENST00000413023 HIST1H2AJQ99878 128 aa8.39□□□□□ -1.07
HMGN1P34-201ENST00000413023 H2AFJQ9BTM1 129 aa8.39□□□□□ -1.07
HMGN1P34-201ENST00000413023 APOOQ9BUR5 198 aa8.39□□□□□ -1.07
HMGN1P34-201ENST00000413023 C1orf50Q9BV19 199 aa8.39□□□□□ -1.07
HMGN1P34-201ENST00000413023 MRPL40Q9NQ50 206 aaKnown RBP8.39□□□□□ -1.07
HMGN1P34-201ENST00000413023 KLQ9UEF7 1012 aa8.39□□□□□ -1.07
HMGN1P34-201ENST00000413023 TRPS1Q9UHF7 1281 aa8.39□□□□□ -1.07
HMGN1P34-201ENST00000413023 ZNF490Q9ULM2 529 aaPredicted RBP8.39□□□□□ -1.07
HMGN1P34-201ENST00000413023 PLAGL1Q9UM63 463 aa8.39□□□□□ -1.07
HMGN1P34-201ENST00000413023 PSMD13Q9UNM6 376 aa8.39□□□□□ -1.07
HMGN1P34-201ENST00000413023 L3MBTL1Q9Y468 752 aa8.39□□□□□ -1.07
HMGN1P34-201ENST00000413023 BPTFQ12830 3046 aa8.38□□□□□ -1.07
HMGN1P34-201ENST00000413023 CEP290O15078 2479 aa8.38□□□□□ -1.07
HMGN1P34-201ENST00000413023 E7ENX8 843 aa8.38□□□□□ -1.07
HMGN1P34-201ENST00000413023 SLC31A1O15431 190 aa8.38□□□□□ -1.07
HMGN1P34-201ENST00000413023 CFLARO15519 480 aa8.38□□□□□ -1.07
HMGN1P34-201ENST00000413023 VPS4BO75351 444 aa8.38□□□□□ -1.07
HMGN1P34-201ENST00000413023 KRT36O76013 467 aa8.38□□□□□ -1.07
HMGN1P34-201ENST00000413023 KLHL18O94889 574 aa8.38□□□□□ -1.07
HMGN1P34-201ENST00000413023 CHRNB1P11230 501 aa8.38□□□□□ -1.07
HMGN1P34-201ENST00000413023 G6PDP11413 515 aa8.38□□□□□ -1.07
HMGN1P34-201ENST00000413023 SLC2A4P14672 509 aa8.38□□□□□ -1.07
HMGN1P34-201ENST00000413023 IL9P15248 144 aa8.38□□□□□ -1.07
HMGN1P34-201ENST00000413023 VARSP26640 1264 aaKnown RBP8.38□□□□□ -1.07
HMGN1P34-201ENST00000413023 HMOX2P30519 316 aa8.38□□□□□ -1.07
HMGN1P34-201ENST00000413023 ACADVLP49748 655 aa8.38□□□□□ -1.07
HMGN1P34-201ENST00000413023 HNMTP50135 292 aa8.38□□□□□ -1.07
HMGN1P34-201ENST00000413023 ERFP50548 548 aa8.38□□□□□ -1.07
HMGN1P34-201ENST00000413023 NUDT2P50583 147 aa8.38□□□□□ -1.07
HMGN1P34-201ENST00000413023 MNAT1P51948 309 aa8.38□□□□□ -1.07
HMGN1P34-201ENST00000413023 AP1S2P56377 157 aa8.38□□□□□ -1.07
HMGN1P34-201ENST00000413023 MXRA7P84157 204 aa8.38□□□□□ -1.07
HMGN1P34-201ENST00000413023 EMX2Q04743 252 aa8.38□□□□□ -1.07
HMGN1P34-201ENST00000413023 TBL3Q12788 808 aaKnown RBP8.38□□□□□ -1.07
HMGN1P34-201ENST00000413023 SGCGQ13326 291 aa8.38□□□□□ -1.07
HMGN1P34-201ENST00000413023 CCNIQ14094 377 aa8.38□□□□□ -1.07
HMGN1P34-201ENST00000413023 STARD3Q14849 445 aa8.38□□□□□ -1.07
HMGN1P34-201ENST00000413023 SMAD2Q15796 467 aaKnown RBP8.38□□□□□ -1.07
HMGN1P34-201ENST00000413023 CPSF6Q16630 551 aaKnown RBP eCLIP8.38□□□□□ -1.07
HMGN1P34-201ENST00000413023 SYTL3Q4VX76 610 aa8.38□□□□□ -1.07
HMGN1P34-201ENST00000413023 PYCR3Q53H96 274 aa8.38□□□□□ -1.07
HMGN1P34-201ENST00000413023 PIGGQ5H8A4 983 aa8.38□□□□□ -1.07
HMGN1P34-201ENST00000413023 PAGE3Q5JUK9 113 aa8.38□□□□□ -1.07
HMGN1P34-201ENST00000413023 IL23RQ5VWK5 629 aa8.38□□□□□ -1.07
HMGN1P34-201ENST00000413023 REP15Q6BDI9 236 aa8.38□□□□□ -1.07
HMGN1P34-201ENST00000413023 CAPRIN2Q6IMN6 1127 aaKnown RBP8.38□□□□□ -1.07
HMGN1P34-201ENST00000413023 SUSD1Q6UWL2 747 aa8.38□□□□□ -1.07
HMGN1P34-201ENST00000413023 LAYNQ6UX15 382 aa8.38□□□□□ -1.07
HMGN1P34-201ENST00000413023 SLCO4C1Q6ZQN7 724 aa8.38□□□□□ -1.07
HMGN1P34-201ENST00000413023 RNF165Q6ZSG1 346 aa8.38□□□□□ -1.07
HMGN1P34-201ENST00000413023 EFL1Q7Z2Z2 1120 aaKnown RBP8.38□□□□□ -1.07
HMGN1P34-201ENST00000413023 TRMT11Q7Z4G4 463 aaKnown RBP8.38□□□□□ -1.07
HMGN1P34-201ENST00000413023 AMZ2Q86W34 360 aa8.38□□□□□ -1.07
HMGN1P34-201ENST00000413023 MIER2Q8N344 545 aa8.38□□□□□ -1.07
HMGN1P34-201ENST00000413023 PLCD3Q8N3E9 789 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms